BLASTX nr result

ID: Bupleurum21_contig00020816 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020816
         (659 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27986.3| unnamed protein product [Vitis vinifera]              337   9e-91
ref|XP_002280299.1| PREDICTED: arginyl-tRNA synthetase-like [Vit...   337   9e-91
ref|XP_002301499.1| predicted protein [Populus trichocarpa] gi|2...   335   5e-90
ref|XP_004135677.1| PREDICTED: arginine--tRNA ligase, cytoplasmi...   332   4e-89
ref|NP_194360.1| Arginyl-tRNA synthetase, class Ic [Arabidopsis ...   323   2e-86

>emb|CBI27986.3| unnamed protein product [Vitis vinifera]
          Length = 691

 Score =  337 bits (865), Expect = 9e-91
 Identities = 165/219 (75%), Positives = 189/219 (86%)
 Frame = +3

Query: 3    EHFDMIMTVAKRAGWLPAEDNMYPRTTHVGFGFVLGKDGKPFRTRSTEVVPLVGLLDEAK 182
            +HF+M+ + AK AGWLPA DNMYP+ +HVGFG VLG+DGK FRTR+TEVV LV LLDEAK
Sbjct: 453  QHFEMVFSAAKLAGWLPANDNMYPKASHVGFGLVLGEDGKRFRTRNTEVVRLVDLLDEAK 512

Query: 183  DRCRDALIERVNERGKDADWTEEELDQTAEAIGYGAVKYADLKNNRLTNYTFNIDQMLND 362
            +R +  LIER    GK A+WTE+EL+ TAEA+GYGAVKYADLKNNRLTNYTFN DQMLND
Sbjct: 513  NRSKSVLIER----GKAAEWTEQELEHTAEAVGYGAVKYADLKNNRLTNYTFNFDQMLND 568

Query: 363  KGNTAVYLLYAYARICSIIRKSGKDMEELKKVGRIELTQDAERVLGLHLLRFAEIVENAC 542
            KGNTAVYLLYA+ARICSIIRKSGKD++ELKK G + L  D ER LGLHLL+F+E+VE AC
Sbjct: 569  KGNTAVYLLYAHARICSIIRKSGKDIDELKKTGVLTLDHDDERGLGLHLLQFSEVVEEAC 628

Query: 543  TNLLPNVLCDYLYALSEDFSGFYSTCQVVGSAEETSRLL 659
            TNLLPNVLC+YLY LSE+F+ FYS CQVVGSAEETSRLL
Sbjct: 629  TNLLPNVLCEYLYNLSENFTKFYSNCQVVGSAEETSRLL 667


>ref|XP_002280299.1| PREDICTED: arginyl-tRNA synthetase-like [Vitis vinifera]
          Length = 649

 Score =  337 bits (865), Expect = 9e-91
 Identities = 165/219 (75%), Positives = 189/219 (86%)
 Frame = +3

Query: 3    EHFDMIMTVAKRAGWLPAEDNMYPRTTHVGFGFVLGKDGKPFRTRSTEVVPLVGLLDEAK 182
            +HF+M+ + AK AGWLPA DNMYP+ +HVGFG VLG+DGK FRTR+TEVV LV LLDEAK
Sbjct: 411  QHFEMVFSAAKLAGWLPANDNMYPKASHVGFGLVLGEDGKRFRTRNTEVVRLVDLLDEAK 470

Query: 183  DRCRDALIERVNERGKDADWTEEELDQTAEAIGYGAVKYADLKNNRLTNYTFNIDQMLND 362
            +R +  LIER    GK A+WTE+EL+ TAEA+GYGAVKYADLKNNRLTNYTFN DQMLND
Sbjct: 471  NRSKSVLIER----GKAAEWTEQELEHTAEAVGYGAVKYADLKNNRLTNYTFNFDQMLND 526

Query: 363  KGNTAVYLLYAYARICSIIRKSGKDMEELKKVGRIELTQDAERVLGLHLLRFAEIVENAC 542
            KGNTAVYLLYA+ARICSIIRKSGKD++ELKK G + L  D ER LGLHLL+F+E+VE AC
Sbjct: 527  KGNTAVYLLYAHARICSIIRKSGKDIDELKKTGVLTLDHDDERGLGLHLLQFSEVVEEAC 586

Query: 543  TNLLPNVLCDYLYALSEDFSGFYSTCQVVGSAEETSRLL 659
            TNLLPNVLC+YLY LSE+F+ FYS CQVVGSAEETSRLL
Sbjct: 587  TNLLPNVLCEYLYNLSENFTKFYSNCQVVGSAEETSRLL 625


>ref|XP_002301499.1| predicted protein [Populus trichocarpa] gi|222843225|gb|EEE80772.1|
           predicted protein [Populus trichocarpa]
          Length = 590

 Score =  335 bits (859), Expect = 5e-90
 Identities = 167/219 (76%), Positives = 185/219 (84%)
 Frame = +3

Query: 3   EHFDMIMTVAKRAGWLPAEDNMYPRTTHVGFGFVLGKDGKPFRTRSTEVVPLVGLLDEAK 182
           +HFDM    AKRAGWLPA+D  YP+ +HVGFG VLG+DGK FRTRSTEVV L  LLDEAK
Sbjct: 352 QHFDMFFKAAKRAGWLPADDRQYPKASHVGFGLVLGEDGKRFRTRSTEVVRLADLLDEAK 411

Query: 183 DRCRDALIERVNERGKDADWTEEELDQTAEAIGYGAVKYADLKNNRLTNYTFNIDQMLND 362
            R + ALIER    GK A+WTEEEL+QTAEA+GYGAVKYADLKNNRLTNYTF+ DQMLND
Sbjct: 412 TRSKAALIER----GKAAEWTEEELEQTAEAVGYGAVKYADLKNNRLTNYTFDFDQMLND 467

Query: 363 KGNTAVYLLYAYARICSIIRKSGKDMEELKKVGRIELTQDAERVLGLHLLRFAEIVENAC 542
           KGNTAVYLLYA+ARICSIIRKSGKD  ELKK G+I L    ER LGLHLL+FAE+VE AC
Sbjct: 468 KGNTAVYLLYAHARICSIIRKSGKDTGELKKTGKIVLDHADERALGLHLLQFAEVVEEAC 527

Query: 543 TNLLPNVLCDYLYALSEDFSGFYSTCQVVGSAEETSRLL 659
           TNLLPNVLC+YLY LSE+++ FYS CQVVGSAEETSRLL
Sbjct: 528 TNLLPNVLCEYLYNLSENYTRFYSNCQVVGSAEETSRLL 566


>ref|XP_004135677.1| PREDICTED: arginine--tRNA ligase, cytoplasmic-like [Cucumis
           sativus] gi|449489808|ref|XP_004158422.1| PREDICTED:
           arginine--tRNA ligase, cytoplasmic-like [Cucumis
           sativus]
          Length = 590

 Score =  332 bits (851), Expect = 4e-89
 Identities = 168/220 (76%), Positives = 187/220 (85%), Gaps = 1/220 (0%)
 Frame = +3

Query: 3   EHFDMIMTVAKRAGWLPAEDNMYPRTTHVGFGFVLGKDGKPFRTRSTEVVPLVGLLDEAK 182
           +HFDM+    KRAGWLP EDN YP+TTHVGFG VLG+DGK FRTR+TEVV LV LLDEAK
Sbjct: 351 QHFDMVFRAGKRAGWLPLEDNKYPKTTHVGFGLVLGEDGKRFRTRNTEVVRLVDLLDEAK 410

Query: 183 DRCRDALIERVNERGKDADWTEEELDQTAEAIGYGAVKYADLKNNRLTNYTFNIDQMLND 362
           +R + ALIER     K A+WTE EL+Q AEA+GYGAVKYADLKNNRLTNYTFN DQMLND
Sbjct: 411 NRSKAALIERE----KAAEWTEAELEQIAEAVGYGAVKYADLKNNRLTNYTFNFDQMLND 466

Query: 363 KGNTAVYLLYAYARICSIIRKSGKDMEELKKVGRIELTQDAERVLGLHLLRFAEIVENAC 542
           KGNTAVYLLYA+ARICSIIRKSGK++EELKK G I L  + ERVLGLHLL+FAE+VE AC
Sbjct: 467 KGNTAVYLLYAHARICSIIRKSGKNIEELKKTGTIVLEHEDERVLGLHLLQFAEVVEEAC 526

Query: 543 TNLLPNVLCDYLYALSEDFS-GFYSTCQVVGSAEETSRLL 659
           TNLLPNVLC+YLY LSE F+  FYS CQVVGSA+ETSRLL
Sbjct: 527 TNLLPNVLCEYLYNLSEIFTKKFYSNCQVVGSAQETSRLL 566


>ref|NP_194360.1| Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana]
            gi|2632105|emb|CAB11468.1| arginyl-tRNA synthetase
            [Arabidopsis thaliana] gi|4539426|emb|CAB38959.1|
            arginyl-tRNA synthetase [Arabidopsis thaliana]
            gi|7269482|emb|CAB79485.1| arginyl-tRNA synthetase
            [Arabidopsis thaliana] gi|332659782|gb|AEE85182.1|
            Arginyl-tRNA synthetase, class Ic [Arabidopsis thaliana]
          Length = 642

 Score =  323 bits (827), Expect = 2e-86
 Identities = 161/219 (73%), Positives = 180/219 (82%)
 Frame = +3

Query: 3    EHFDMIMTVAKRAGWLPAEDNMYPRTTHVGFGFVLGKDGKPFRTRSTEVVPLVGLLDEAK 182
            +HF+M    A++AGWLP  D  YPR  HVGFG VLG+DGK FRTR+T+VV LV LLDEAK
Sbjct: 404  QHFNMFFKAARKAGWLPDNDKTYPRVNHVGFGLVLGEDGKRFRTRATDVVRLVDLLDEAK 463

Query: 183  DRCRDALIERVNERGKDADWTEEELDQTAEAIGYGAVKYADLKNNRLTNYTFNIDQMLND 362
             R + ALIER    GKD +WT EELDQTAEA+GYGAVKYADLKNNRLTNYTF+ DQMLND
Sbjct: 464  TRSKLALIER----GKDKEWTPEELDQTAEAVGYGAVKYADLKNNRLTNYTFSFDQMLND 519

Query: 363  KGNTAVYLLYAYARICSIIRKSGKDMEELKKVGRIELTQDAERVLGLHLLRFAEIVENAC 542
            KGNTAVYLLYA+ARICSIIRKSGKD++ELKK G++ L    ER LGLHLLRFAE VE AC
Sbjct: 520  KGNTAVYLLYAHARICSIIRKSGKDIDELKKTGKLALDHADERALGLHLLRFAETVEEAC 579

Query: 543  TNLLPNVLCDYLYALSEDFSGFYSTCQVVGSAEETSRLL 659
            TNLLP+VLC+YLY LSE F+ FYS CQV GS EETSRLL
Sbjct: 580  TNLLPSVLCEYLYNLSEHFTRFYSNCQVNGSPEETSRLL 618


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