BLASTX nr result
ID: Bupleurum21_contig00020813
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00020813
(2090 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|2... 404 e-110
ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin... 404 e-110
ref|XP_002314462.1| predicted protein [Populus trichocarpa] gi|2... 403 e-110
emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera] 401 e-109
ref|XP_002516892.1| nucleic acid binding protein, putative [Rici... 390 e-106
>ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|222871556|gb|EEF08687.1|
predicted protein [Populus trichocarpa]
Length = 477
Score = 404 bits (1038), Expect = e-110
Identities = 191/328 (58%), Positives = 221/328 (67%), Gaps = 1/328 (0%)
Frame = -2
Query: 2086 EGSSADPVAEWSSPGGETGLEEPMWQXXXXXXXXXXSYPERPDEADCIYYLRTGFCGYGS 1907
EGS +DP EW+ G ETGLEE +WQ YPER +E DC+YYLRTGFCGYG+
Sbjct: 9 EGSQSDPALEWTGSGPETGLEEGVWQLGLGETESE--YPERSNEQDCMYYLRTGFCGYGA 66
Query: 1906 RCRYNHPRDRNLIVGAMRASGGEYPERVGQPVCQYYMRTGMCKFGASCKYHHPRQXXXXX 1727
RCRYNHPRDRN ++GA RA G EYPER GQP+CQYYMRTG CKFGASCKYHHP+Q
Sbjct: 67 RCRYNHPRDRNAVLGAARAGGAEYPERAGQPLCQYYMRTGTCKFGASCKYHHPKQGGGSA 126
Query: 1726 XXXXXXXXGYPLRPGEKECSYYLKTGQCKFGMTCKFHHPQPDGIHIXXXXXXXXXXXXXX 1547
GYPLRPGE+EC+YY+KTGQCKFG TCKFHHPQP I I
Sbjct: 127 SPVSLNYYGYPLRPGERECTYYIKTGQCKFGATCKFHHPQPGNIQIPAQSLAPQIAPVPG 186
Query: 1546 PSVIYPTMQSPG-PPSQQYGVVAGNWPVARPALLPGSYIQGTYGPVILPPGMVPMAGWNP 1370
P+ +YP++QSP P SQQYGV+ VARP LLPGSY+QG YGPV+L P +VP WNP
Sbjct: 187 PT-LYPSVQSPSVPSSQQYGVM-----VARPPLLPGSYVQGPYGPVLLSPSVVPYPSWNP 240
Query: 1369 YQXXXXXXXXXXXXXXXXXXPIYGMPQLSSSAPAYAGPYLSMAPPSGPSGFNQKEHAYPE 1190
Y +YGM LS SAPAY G + S+ P +GPS QKEH +PE
Sbjct: 241 YPAPVSPVASPNTQPAVGSGSVYGMSALSPSAPAYTGAFQSIPPATGPSSSTQKEHLFPE 300
Query: 1189 RPDQPECQHYMKTGECKFGSSCKYHHPP 1106
RP QPECQ+Y+KTG+CKF SSC+YHHPP
Sbjct: 301 RPGQPECQYYIKTGDCKFRSSCRYHHPP 328
Score = 96.3 bits (238), Expect = 3e-17
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = -2
Query: 1837 YPERVGQPVCQYYMRTGMCKFGASCKYHHPRQXXXXXXXXXXXXXGYPLRPGEKECSYYL 1658
+PER GQP CQYY++TG CKF +SC+YHHP + G PLRPG CS+Y
Sbjct: 298 FPERPGQPECQYYIKTGDCKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRPGAPTCSHYT 357
Query: 1657 KTGQCKFGMTCKFHHP 1610
+ GQCKFG CKF HP
Sbjct: 358 QRGQCKFGPACKFDHP 373
Score = 90.9 bits (224), Expect = 1e-15
Identities = 51/114 (44%), Positives = 60/114 (52%)
Frame = -3
Query: 975 LRPGAPLCSHYALNGICKFGHSCKFNHPMXXXXXXXXXXXXTDMPVAPYPVGXXXXXXXX 796
LRPGAP CSHY G CKFG +CKF+HPM DMPVAPY VG
Sbjct: 346 LRPGAPTCSHYTQRGQCKFGPACKFDHPMGTLSYSPSASSLADMPVAPYLVGSSIGTLAP 405
Query: 795 XXXXXXXXXXXXSGSSNEAVSTRMPTNVSTAAGSVGSIFSSNTPHQQSSIQQPG 634
SG S ++ STR+ T ST +GSVGSIFS + P ++QQ G
Sbjct: 406 SSSSSDLRSKPISGPSKDSSSTRLST--STPSGSVGSIFSKSGPAPHLNVQQSG 457
>ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
vinifera] gi|297736890|emb|CBI26091.3| unnamed protein
product [Vitis vinifera]
Length = 478
Score = 404 bits (1038), Expect = e-110
Identities = 191/328 (58%), Positives = 219/328 (66%), Gaps = 1/328 (0%)
Frame = -2
Query: 2086 EGSSADPVAEWSSPGGETGLEEPMWQXXXXXXXXXXSYPERPDEADCIYYLRTGFCGYGS 1907
EGS +DP EW+ P ETGLEEP+WQ YPERPDEADCIYYL+TGFCGYG+
Sbjct: 11 EGSPSDPSQEWTGPVAETGLEEPLWQLGLGGGGEA--YPERPDEADCIYYLKTGFCGYGA 68
Query: 1906 RCRYNHPRDRNLIVGAMRASGGEYPERVGQPVCQYYMRTGMCKFGASCKYHHPRQXXXXX 1727
RCR+NHPRDR + G +R GGE+PERVGQPVCQ+YM+TG CKFGASCKYHHPRQ
Sbjct: 69 RCRFNHPRDRGGVGGTVRPGGGEFPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTV 128
Query: 1726 XXXXXXXXGYPLRPGEKECSYYLKTGQCKFGMTCKFHHPQPDGIHIXXXXXXXXXXXXXX 1547
GYPLRPGEKECSYY+KTG CKFG TCKFHHPQPD I +
Sbjct: 129 SPVTLNYFGYPLRPGEKECSYYVKTGLCKFGETCKFHHPQPDSIQLSTPGPAALPAPVPA 188
Query: 1546 PSVIYPTMQSPG-PPSQQYGVVAGNWPVARPALLPGSYIQGTYGPVILPPGMVPMAGWNP 1370
+ +YPT+QSP P SQQYG+V VARP LLP SY G Y PV++PPGMVP GW+
Sbjct: 189 HT-LYPTVQSPSVPSSQQYGLV-----VARPPLLPSSYFHGPYSPVLIPPGMVPFPGWSH 242
Query: 1369 YQXXXXXXXXXXXXXXXXXXPIYGMPQLSSSAPAYAGPYLSMAPPSGPSGFNQKEHAYPE 1190
Y +YG+ LS SAPAY GPY + GPS +QKE +PE
Sbjct: 243 YPAPVSPVASPSTQPTVGSGQMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQKEQIFPE 302
Query: 1189 RPDQPECQHYMKTGECKFGSSCKYHHPP 1106
RP QPECQ+YM+TG+CKFGSSCKYHHPP
Sbjct: 303 RPGQPECQYYMRTGDCKFGSSCKYHHPP 330
Score = 107 bits (267), Expect = 1e-20
Identities = 58/116 (50%), Positives = 70/116 (60%)
Frame = -3
Query: 975 LRPGAPLCSHYALNGICKFGHSCKFNHPMXXXXXXXXXXXXTDMPVAPYPVGXXXXXXXX 796
LRPGAP C+HYA GICKFG +CKF+HPM DMPVAPYPVG
Sbjct: 348 LRPGAPQCTHYAQRGICKFGPTCKFDHPMGTLSYSPSASSLADMPVAPYPVGSSMGTLAP 407
Query: 795 XXXXXXXXXXXXSGSSNEAVSTRMPTNVSTAAGSVGSIFSSNTPHQQSSIQQPGQN 628
SGSS E++STRM +++ST++GSVGSIFS + P SS QQP Q+
Sbjct: 408 SSSSSDLRPELISGSSKESLSTRMSSSMSTSSGSVGSIFSKSGP-GHSSTQQPVQS 462
Score = 102 bits (253), Expect = 5e-19
Identities = 44/76 (57%), Positives = 51/76 (67%)
Frame = -2
Query: 1837 YPERVGQPVCQYYMRTGMCKFGASCKYHHPRQXXXXXXXXXXXXXGYPLRPGEKECSYYL 1658
+PER GQP CQYYMRTG CKFG+SCKYHHP + G PLRPG +C++Y
Sbjct: 300 FPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCTHYA 359
Query: 1657 KTGQCKFGMTCKFHHP 1610
+ G CKFG TCKF HP
Sbjct: 360 QRGICKFGPTCKFDHP 375
>ref|XP_002314462.1| predicted protein [Populus trichocarpa] gi|222863502|gb|EEF00633.1|
predicted protein [Populus trichocarpa]
Length = 456
Score = 403 bits (1036), Expect = e-110
Identities = 190/328 (57%), Positives = 221/328 (67%), Gaps = 1/328 (0%)
Frame = -2
Query: 2086 EGSSADPVAEWSSPGGETGLEEPMWQXXXXXXXXXXSYPERPDEADCIYYLRTGFCGYGS 1907
EGS +DP EW+ G ETGLEE +WQ YPERP+E DC+YYLRTGFCGYG+
Sbjct: 9 EGSQSDPAQEWTGSGQETGLEEGVWQLEIGETESE--YPERPNEQDCMYYLRTGFCGYGA 66
Query: 1906 RCRYNHPRDRNLIVGAMRASGGEYPERVGQPVCQYYMRTGMCKFGASCKYHHPRQXXXXX 1727
RCRYNHPRDR ++GA RA GGE+PERVGQP+CQYYMRTG CKFGASCKY+HP+Q
Sbjct: 67 RCRYNHPRDRTAVLGAARAGGGEFPERVGQPLCQYYMRTGTCKFGASCKYNHPKQGGSSV 126
Query: 1726 XXXXXXXXGYPLRPGEKECSYYLKTGQCKFGMTCKFHHPQPDGIHIXXXXXXXXXXXXXX 1547
GYPLRPGE+EC+YY+KTGQCKFG TCKFHHPQP + I
Sbjct: 127 RPVSLNYYGYPLRPGERECTYYIKTGQCKFGATCKFHHPQPANMQIPAQSLAPQVASVPA 186
Query: 1546 PSVIYPTMQSPG-PPSQQYGVVAGNWPVARPALLPGSYIQGTYGPVILPPGMVPMAGWNP 1370
+ +YPTMQSP P SQQYGV+ VARP LLPGSY+QG YGPV+L P +VP W+P
Sbjct: 187 HT-LYPTMQSPSVPSSQQYGVM-----VARPPLLPGSYVQGPYGPVLLSPSLVPYPSWSP 240
Query: 1369 YQXXXXXXXXXXXXXXXXXXPIYGMPQLSSSAPAYAGPYLSMAPPSGPSGFNQKEHAYPE 1190
Y +YG+ LS SAPAY G Y S+ GPS +QKEH +PE
Sbjct: 241 YPAPVSPVASPNAQPAVGSGSVYGISPLSPSAPAYTGAYQSIPTAKGPSSSSQKEHVFPE 300
Query: 1189 RPDQPECQHYMKTGECKFGSSCKYHHPP 1106
RP QPECQ+YMKTG+CKF SSC+YHHPP
Sbjct: 301 RPGQPECQYYMKTGDCKFESSCRYHHPP 328
Score = 96.3 bits (238), Expect = 3e-17
Identities = 41/76 (53%), Positives = 49/76 (64%)
Frame = -2
Query: 1837 YPERVGQPVCQYYMRTGMCKFGASCKYHHPRQXXXXXXXXXXXXXGYPLRPGEKECSYYL 1658
+PER GQP CQYYM+TG CKF +SC+YHHP + G PLRPG C++Y
Sbjct: 298 FPERPGQPECQYYMKTGDCKFESSCRYHHPPELVTSKTNVVLSPMGLPLRPGAPTCTHYT 357
Query: 1657 KTGQCKFGMTCKFHHP 1610
+ GQCKFG CKF HP
Sbjct: 358 QHGQCKFGPACKFDHP 373
Score = 89.4 bits (220), Expect = 4e-15
Identities = 47/114 (41%), Positives = 61/114 (53%)
Frame = -3
Query: 975 LRPGAPLCSHYALNGICKFGHSCKFNHPMXXXXXXXXXXXXTDMPVAPYPVGXXXXXXXX 796
LRPGAP C+HY +G CKFG +CKF+HPM DMPVAPYPVG
Sbjct: 346 LRPGAPTCTHYTQHGQCKFGPACKFDHPMGTLSYSPSASSLADMPVAPYPVGSSIGTLAP 405
Query: 795 XXXXXXXXXXXXSGSSNEAVSTRMPTNVSTAAGSVGSIFSSNTPHQQSSIQQPG 634
S ++ STR+ ++ ST +GSVGS +S + P SS+Q+ G
Sbjct: 406 SSSSSDMRSK----PSKDSSSTRLSSSTSTPSGSVGSKYSKSGPASHSSVQKSG 455
>emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
Length = 518
Score = 401 bits (1030), Expect = e-109
Identities = 190/328 (57%), Positives = 218/328 (66%), Gaps = 1/328 (0%)
Frame = -2
Query: 2086 EGSSADPVAEWSSPGGETGLEEPMWQXXXXXXXXXXSYPERPDEADCIYYLRTGFCGYGS 1907
EGS +DP EW+ P ETGLEEP+W YPERPDEADCIYYL+TGFCGYG+
Sbjct: 51 EGSPSDPSQEWTGPVAETGLEEPLWXLGLGGGGEA--YPERPDEADCIYYLKTGFCGYGA 108
Query: 1906 RCRYNHPRDRNLIVGAMRASGGEYPERVGQPVCQYYMRTGMCKFGASCKYHHPRQXXXXX 1727
RCR+NHPRDR + G +R GGE+PERVGQPVCQ+YM+TG CKFGASCKYHHPRQ
Sbjct: 109 RCRFNHPRDRGGVGGTVRPGGGEFPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTV 168
Query: 1726 XXXXXXXXGYPLRPGEKECSYYLKTGQCKFGMTCKFHHPQPDGIHIXXXXXXXXXXXXXX 1547
GYPLRPGEKECSYY+KTG CKFG TCKFHHPQPD I +
Sbjct: 169 SPVTLNYFGYPLRPGEKECSYYVKTGLCKFGETCKFHHPQPDSIQLSTPGPAALPAPVPA 228
Query: 1546 PSVIYPTMQSPG-PPSQQYGVVAGNWPVARPALLPGSYIQGTYGPVILPPGMVPMAGWNP 1370
+ +YP +QSP P SQQYG+V VARP LLP SYI G Y PV++PPGMVP GW+
Sbjct: 229 HT-LYPXVQSPSVPSSQQYGLV-----VARPPLLPSSYIHGPYSPVLIPPGMVPFPGWSH 282
Query: 1369 YQXXXXXXXXXXXXXXXXXXPIYGMPQLSSSAPAYAGPYLSMAPPSGPSGFNQKEHAYPE 1190
Y +YG+ LS SAPAY GPY + GPS +QKE +PE
Sbjct: 283 YPAPVSPVASPSTQPTVGSGQMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQKEQIFPE 342
Query: 1189 RPDQPECQHYMKTGECKFGSSCKYHHPP 1106
RP QPECQ+YM+TG+CKFGSSCKYHHPP
Sbjct: 343 RPGQPECQYYMRTGDCKFGSSCKYHHPP 370
Score = 107 bits (267), Expect = 1e-20
Identities = 58/116 (50%), Positives = 70/116 (60%)
Frame = -3
Query: 975 LRPGAPLCSHYALNGICKFGHSCKFNHPMXXXXXXXXXXXXTDMPVAPYPVGXXXXXXXX 796
LRPGAP C+HYA GICKFG +CKF+HPM DMPVAPYPVG
Sbjct: 388 LRPGAPQCTHYAQRGICKFGPTCKFDHPMGTLSYSPSASSLADMPVAPYPVGSSMGTLAP 447
Query: 795 XXXXXXXXXXXXSGSSNEAVSTRMPTNVSTAAGSVGSIFSSNTPHQQSSIQQPGQN 628
SGSS E++STRM +++ST++GSVGSIFS + P SS QQP Q+
Sbjct: 448 SSSSSDLRPELISGSSKESLSTRMSSSMSTSSGSVGSIFSKSGP-GHSSTQQPVQS 502
Score = 102 bits (253), Expect = 5e-19
Identities = 44/76 (57%), Positives = 51/76 (67%)
Frame = -2
Query: 1837 YPERVGQPVCQYYMRTGMCKFGASCKYHHPRQXXXXXXXXXXXXXGYPLRPGEKECSYYL 1658
+PER GQP CQYYMRTG CKFG+SCKYHHP + G PLRPG +C++Y
Sbjct: 340 FPERPGQPECQYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCTHYA 399
Query: 1657 KTGQCKFGMTCKFHHP 1610
+ G CKFG TCKF HP
Sbjct: 400 QRGICKFGPTCKFDHP 415
>ref|XP_002516892.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223543980|gb|EEF45506.1| nucleic acid binding protein,
putative [Ricinus communis]
Length = 481
Score = 390 bits (1003), Expect = e-106
Identities = 193/332 (58%), Positives = 221/332 (66%), Gaps = 5/332 (1%)
Frame = -2
Query: 2086 EGSSADPVAEWSSPGGETGLEEPMWQXXXXXXXXXXSYPERPDEADCIYYLRTGFCGYGS 1907
EGS +DP EW+ PG ET LEE WQ YPERP+EADCIYYLRTGFCGYGS
Sbjct: 9 EGSQSDPSPEWTGPGPETVLEEGDWQLGLGEVEPG--YPERPEEADCIYYLRTGFCGYGS 66
Query: 1906 RCRYNHPRDRNLIVGAMRASGGEYPERVGQPVCQYYMRTGMCKFGASCKYHHPRQXXXXX 1727
RCR+NHPRDR ++GA RA E+PERVGQPVCQYYMRTG CKFGASCKYHHP+Q
Sbjct: 67 RCRFNHPRDRGAVLGAARAGAAEFPERVGQPVCQYYMRTGTCKFGASCKYHHPKQGGGSA 126
Query: 1726 XXXXXXXXGYPLRPGEKECSYYLKTGQCKFGMTCKFHHPQPDGIHI---XXXXXXXXXXX 1556
GYPLRPGEKEC+YY+KTGQCKFG+TCKFHHPQP + I
Sbjct: 127 NPVSLNYYGYPLRPGEKECTYYVKTGQCKFGVTCKFHHPQPANLQIQAQSPALQVAPVPA 186
Query: 1555 XXXPSVIYPTMQSPGPPS-QQYGVVAGNWPVARPALLPGSYIQGTYGPVILPPGMVPMAG 1379
S +YP +QSP PS QQYG+V VARP LLPGSY+QG YGP+++ PG+VP
Sbjct: 187 PVPASALYPNVQSPSVPSTQQYGLV-----VARPPLLPGSYVQGPYGPMLVSPGVVPYPS 241
Query: 1378 WNPYQXXXXXXXXXXXXXXXXXXPIYGMPQLSSSAPAYAGPYLSMAPPSGPSGFNQKEH- 1202
W+PY +YG+ QLS SAPAY G Y +M PS NQKE
Sbjct: 242 WSPY-PGPISPVASPSTQLGVGSGVYGITQLSPSAPAYTGGYQAM-----PSSSNQKEQP 295
Query: 1201 AYPERPDQPECQHYMKTGECKFGSSCKYHHPP 1106
++PERP QPECQ+YMKTG+CKFGSSCKYHHPP
Sbjct: 296 SFPERPGQPECQYYMKTGDCKFGSSCKYHHPP 327
Score = 101 bits (251), Expect = 9e-19
Identities = 43/76 (56%), Positives = 50/76 (65%)
Frame = -2
Query: 1837 YPERVGQPVCQYYMRTGMCKFGASCKYHHPRQXXXXXXXXXXXXXGYPLRPGEKECSYYL 1658
+PER GQP CQYYM+TG CKFG+SCKYHHP + G PLRPG C++Y
Sbjct: 297 FPERPGQPECQYYMKTGDCKFGSSCKYHHPPELIAPKTNVVLSPMGLPLRPGAPHCTHYT 356
Query: 1657 KTGQCKFGMTCKFHHP 1610
+ GQCKFG CKF HP
Sbjct: 357 QRGQCKFGPACKFDHP 372
Score = 93.2 bits (230), Expect = 2e-16
Identities = 50/116 (43%), Positives = 62/116 (53%)
Frame = -3
Query: 975 LRPGAPLCSHYALNGICKFGHSCKFNHPMXXXXXXXXXXXXTDMPVAPYPVGXXXXXXXX 796
LRPGAP C+HY G CKFG +CKF+HPM +DMPVAPYPVG
Sbjct: 345 LRPGAPHCTHYTQRGQCKFGPACKFDHPMGSLSYSPSASSLSDMPVAPYPVGSSMGTLAP 404
Query: 795 XXXXXXXXXXXXSGSSNEAVSTRMPTNVSTAAGSVGSIFSSNTPHQQSSIQQPGQN 628
SGSS ++ STRM +++ST +G VGSIFS + S Q Q+
Sbjct: 405 SSSSSELRPELVSGSSKDSSSTRMSSSMSTTSGMVGSIFSKSGTVHHSGAQLSSQS 460