BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020804
         (451 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519191.1| pentatricopeptide repeat-containing protein,...   219   2e-55
ref|XP_002311400.1| predicted protein [Populus trichocarpa] gi|2...   214   4e-54
ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat...   209   2e-52
ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pen...   207   7e-52
ref|NP_188314.1| pentatricopeptide repeat-containing protein [Ar...   198   3e-49

>ref|XP_002519191.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223541506|gb|EEF43055.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 719

 Score =  219 bits (558), Expect = 2e-55
 Identities = 107/146 (73%), Positives = 123/146 (84%)
 Frame = -3

Query: 449 YLGLVVGTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVD 270
           +LG+   TRLYNAVIDALVKSNSLDLAYLKFQQM  DNC+PDRFTYNILIHGVC+ GVVD
Sbjct: 210 FLGISPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNILIHGVCRSGVVD 269

Query: 269 EALQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLI 90
           EAL+L+KQME  GYSPNVFTYTILIDG+ NA KVDEAFR+L+TM  R V P+EAT RS I
Sbjct: 270 EALRLVKQMEGLGYSPNVFTYTILIDGFFNAKKVDEAFRVLETMKARKVSPSEATIRSFI 329

Query: 89  NGAFRSLSPHKAFHLLYEFLERDAKL 12
           +G FR ++P+KAF L  EF+ER+  L
Sbjct: 330 HGVFRCVAPNKAFELAIEFIEREPVL 355



 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 40/119 (33%), Positives = 65/119 (54%)
 Frame = -3

Query: 443 GLVVGTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEA 264
           GL+     YN VID   K++ +D A   F++MQ     P+  T+N LI G CK G + ++
Sbjct: 457 GLLCNVCSYNMVIDCFCKTSMMDKATNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKS 516

Query: 263 LQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLIN 87
             L+  +   G+ P++FT++ +IDG C A ++++A      M    + PN  TY  LI+
Sbjct: 517 RDLLVMLLEHGFKPDIFTFSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIH 575



 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/110 (30%), Positives = 67/110 (60%)
 Frame = -3

Query: 419 YNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEALQLMKQME 240
           ++++ID L ++  ++ A   F +M +    P+  TYNILIH +C +G V  +++L+++M+
Sbjct: 535 FSSIIDGLCRAKQIEDALGCFSEMVMWGLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQ 594

Query: 239 VSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLI 90
             G +P+VF++  LI  +C   KV++A ++  +M    + P+  TY + I
Sbjct: 595 TDGINPDVFSFNALIQSFCRMGKVEDAKKLFSSMLSLGLIPDNYTYVAFI 644



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 38/124 (30%), Positives = 64/124 (51%)
 Frame = -3

Query: 443 GLVVGTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEA 264
           G+  G   Y A+I AL  +  +      F QM  D    +  +YN++I   CK  ++D+A
Sbjct: 422 GMKFGFSTYLALIKALYMAGKVTEGNHYFNQMVKDGLLCNVCSYNMVIDCFCKTSMMDKA 481

Query: 263 LQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLING 84
               K+M+  G  PN+ T+  LIDGYC   ++ ++  +L  +     KP+  T+ S+I+G
Sbjct: 482 TNTFKEMQYKGIPPNLVTFNTLIDGYCKGGEICKSRDLLVMLLEHGFKPDIFTFSSIIDG 541

Query: 83  AFRS 72
             R+
Sbjct: 542 LCRA 545



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/119 (26%), Positives = 57/119 (47%)
 Frame = -3

Query: 443 GLVVGTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEA 264
           GL      YN +I +L     +  +    ++MQ D   PD F++N LI   C++G V++A
Sbjct: 562 GLSPNAVTYNILIHSLCIIGDVPRSMKLLRKMQTDGINPDVFSFNALIQSFCRMGKVEDA 621

Query: 263 LQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLIN 87
            +L   M   G  P+ +TY   I  +C + + +EA  +  +M      P+  T   +++
Sbjct: 622 KKLFSSMLSLGLIPDNYTYVAFIKVFCQSGRFNEAKELFLSMEANGCMPDSFTCNIILD 680


>ref|XP_002311400.1| predicted protein [Populus trichocarpa] gi|222851220|gb|EEE88767.1|
           predicted protein [Populus trichocarpa]
          Length = 548

 Score =  214 bits (546), Expect = 4e-54
 Identities = 101/146 (69%), Positives = 123/146 (84%)
 Frame = -3

Query: 449 YLGLVVGTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVD 270
           +LG+   TRLYNAVIDALVKSNSLDLAYLKFQQM  DNC+PDRFTYN+LIHGVCK+GVVD
Sbjct: 47  FLGITPSTRLYNAVIDALVKSNSLDLAYLKFQQMSADNCKPDRFTYNMLIHGVCKIGVVD 106

Query: 269 EALQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLI 90
           EAL+L+KQME  GYS NV+TYT LI G+CNA +VDEAFR+ +TM  RNV PNEAT RSL+
Sbjct: 107 EALRLVKQMEGFGYSANVYTYTNLIYGFCNAKRVDEAFRVFETMKLRNVNPNEATIRSLV 166

Query: 89  NGAFRSLSPHKAFHLLYEFLERDAKL 12
           +G FR ++P +AF L+ +F+E++  L
Sbjct: 167 HGVFRCVAPREAFELVIDFIEKEPVL 192



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/123 (32%), Positives = 68/123 (55%)
 Frame = -3

Query: 446 LGLVVGTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDE 267
           LGL      ++++ID L ++   D A   F +M      P+  TYNILI  +C +G V  
Sbjct: 363 LGLKPDIFTFSSIIDCLCRAQQFDDALGCFSEMVEWGISPNAVTYNILIRSLCLIGDVGR 422

Query: 266 ALQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLIN 87
           +++L+K M   G SP++F++  LI  +C   KV++A ++  +M+   + PN  TY +L+ 
Sbjct: 423 SMKLLKDMRKDGISPDIFSFNALIQSFCRMGKVEKAEKMFVSMSTLGLIPNNYTYGALVK 482

Query: 86  GAF 78
             F
Sbjct: 483 ALF 485



 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 44/126 (34%), Positives = 66/126 (52%), Gaps = 6/126 (4%)
 Frame = -3

Query: 449 YLGLVVGTRL------YNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVC 288
           YL  +V  RL      YN +ID   K+N ++ A + F+ MQ     P+  T+N LI G C
Sbjct: 286 YLNQMVKDRLVSDVFSYNMLIDCFCKANVMNKAVMVFKVMQDRGVSPNLVTFNTLISGHC 345

Query: 287 KVGVVDEALQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEA 108
           K G V +A +L++ +   G  P++FT++ +ID  C A + D+A      M    + PN  
Sbjct: 346 KDGEVHKARELLQMLLELGLKPDIFTFSSIIDCLCRAQQFDDALGCFSEMVEWGISPNAV 405

Query: 107 TYRSLI 90
           TY  LI
Sbjct: 406 TYNILI 411



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 43/139 (30%), Positives = 69/139 (49%)
 Frame = -3

Query: 443 GLVVGTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEA 264
           G  +G   Y A+I+ L K+           QM  D    D F+YN+LI   CK  V+++A
Sbjct: 259 GAKLGFSFYLALIETLYKAGRGMEGDRYLNQMVKDRLVSDVFSYNMLIDCFCKANVMNKA 318

Query: 263 LQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLING 84
           + + K M+  G SPN+ T+  LI G+C   +V +A  +L  +    +KP+  T+ S+I+ 
Sbjct: 319 VMVFKVMQDRGVSPNLVTFNTLISGHCKDGEVHKARELLQMLLELGLKPDIFTFSSIIDC 378

Query: 83  AFRSLSPHKAFHLLYEFLE 27
             R+     A     E +E
Sbjct: 379 LCRAQQFDDALGCFSEMVE 397



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/100 (35%), Positives = 50/100 (50%)
 Frame = -3

Query: 314 YNILIHGVCKVGVVDEALQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMN 135
           Y  LI  + K G   E  + + QM       +VF+Y +LID +C AN +++A  +   M 
Sbjct: 267 YLALIETLYKAGRGMEGDRYLNQMVKDRLVSDVFSYNMLIDCFCKANVMNKAVMVFKVMQ 326

Query: 134 RRNVKPNEATYRSLINGAFRSLSPHKAFHLLYEFLERDAK 15
            R V PN  T+ +LI+G  +    HKA  LL   LE   K
Sbjct: 327 DRGVSPNLVTFNTLISGHCKDGEVHKARELLQMLLELGLK 366



 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 30/115 (26%), Positives = 53/115 (46%)
 Frame = -3

Query: 419 YNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEALQLMKQME 240
           YN +I +L     +  +    + M+ D   PD F++N LI   C++G V++A ++   M 
Sbjct: 407 YNILIRSLCLIGDVGRSMKLLKDMRKDGISPDIFSFNALIQSFCRMGKVEKAEKMFVSMS 466

Query: 239 VSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLINGAFR 75
             G  PN +TY  L+       + DEA ++  +M      P+  T   +    F+
Sbjct: 467 TLGLIPNNYTYGALVKALFELGRCDEAKKMFFSMEVNGCVPDSFTCNLISENLFK 521


>ref|XP_004162218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g16890, mitochondrial-like [Cucumis sativus]
          Length = 697

 Score =  209 bits (531), Expect = 2e-52
 Identities = 103/141 (73%), Positives = 117/141 (82%)
 Frame = -3

Query: 446 LGLVVGTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDE 267
           LGL   TRLYNAV+DAL+KSNSLDLAYLKFQQM   NC PDRFTYNILIHGVC++GVVDE
Sbjct: 223 LGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDE 282

Query: 266 ALQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLIN 87
           AL+LMKQME  GY PNVFTYTILIDG+ NA +  EAF++L TM  RNV PNEAT RSL++
Sbjct: 283 ALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGEAFKVLQTMKERNVVPNEATMRSLVH 342

Query: 86  GAFRSLSPHKAFHLLYEFLER 24
           G FR ++P KAF LL EF+ER
Sbjct: 343 GVFRCIAPDKAFELLLEFVER 363



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/118 (38%), Positives = 65/118 (55%)
 Frame = -3

Query: 443 GLVVGTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEA 264
           GL+     YN VID L K  S+D A   F+ +      P+  TYN LI G C+ G +D+A
Sbjct: 469 GLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKA 528

Query: 263 LQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLI 90
            +L++ +  S + P++FT+  LIDG C A+K + AF     M   +V PN  TY  LI
Sbjct: 529 QELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILI 586



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/131 (31%), Positives = 72/131 (54%)
 Frame = -3

Query: 419 YNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEALQLMKQME 240
           +N++ID L +++  + A+  F +M   +  P+  TYNILI   C +G V  +  L++QM+
Sbjct: 547 FNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMK 606

Query: 239 VSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLINGAFRSLSPH 60
           + G  P+ F++  LI GY   N+  +A ++ D+M R  ++P+  TY +LI    +S    
Sbjct: 607 LHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHD 666

Query: 59  KAFHLLYEFLE 27
           KA  +     E
Sbjct: 667 KAREIFLSMKE 677



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/147 (28%), Positives = 76/147 (51%)
 Frame = -3

Query: 443 GLVVGTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEA 264
           G+  G   Y  +I+AL K+  +++      ++  D    + ++YN++I  +CK   +D A
Sbjct: 434 GVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRA 493

Query: 263 LQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLING 84
            ++ + +   G SPN+ TY  LI G+C    +D+A  +L+ +     +P+  T+ SLI+G
Sbjct: 494 SEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDG 553

Query: 83  AFRSLSPHKAFHLLYEFLERDAKLPNV 3
             ++     AF    E +E D   PNV
Sbjct: 554 LCQAHKHENAFGCFTEMVEWDVP-PNV 579



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 37/139 (26%), Positives = 63/139 (45%)
 Frame = -3

Query: 443 GLVVGTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEA 264
           G V  +  +N  +  ++K   L +    F        +P   TY  LI  + K G ++  
Sbjct: 399 GYVPSSSTFNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIG 458

Query: 263 LQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLING 84
            + M ++   G   N+++Y ++ID  C    +D A  +   ++ R + PN  TY +LI G
Sbjct: 459 NRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGG 518

Query: 83  AFRSLSPHKAFHLLYEFLE 27
             R+ +  KA  LL   LE
Sbjct: 519 FCRNGNMDKAQELLEMLLE 537


>ref|XP_004134500.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g16890, mitochondrial-like
           [Cucumis sativus]
          Length = 688

 Score =  207 bits (527), Expect = 7e-52
 Identities = 102/141 (72%), Positives = 116/141 (82%)
 Frame = -3

Query: 446 LGLVVGTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDE 267
           LGL   TRLYNAV+DAL+KSNSLDLAYLKFQQM   NC PDRFTYNILIHGVC++GVVDE
Sbjct: 223 LGLNPTTRLYNAVMDALIKSNSLDLAYLKFQQMSSHNCVPDRFTYNILIHGVCRLGVVDE 282

Query: 266 ALQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLIN 87
           AL+LMKQME  GY PNVFTYTILIDG+ NA +  E F++L TM  RNV PNEAT RSL++
Sbjct: 283 ALRLMKQMEGLGYFPNVFTYTILIDGFFNAKRAGETFKVLQTMKERNVVPNEATMRSLVH 342

Query: 86  GAFRSLSPHKAFHLLYEFLER 24
           G FR ++P KAF LL EF+ER
Sbjct: 343 GVFRCIAPDKAFELLLEFVER 363



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 46/118 (38%), Positives = 65/118 (55%)
 Frame = -3

Query: 443 GLVVGTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEA 264
           GL+     YN VID L K  S+D A   F+ +      P+  TYN LI G C+ G +D+A
Sbjct: 460 GLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKA 519

Query: 263 LQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLI 90
            +L++ +  S + P++FT+  LIDG C A+K + AF     M   +V PN  TY  LI
Sbjct: 520 QELLEMLLESRFRPDIFTFNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILI 577



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/131 (31%), Positives = 72/131 (54%)
 Frame = -3

Query: 419 YNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEALQLMKQME 240
           +N++ID L +++  + A+  F +M   +  P+  TYNILI   C +G V  +  L++QM+
Sbjct: 538 FNSLIDGLCQAHKHENAFGCFTEMVEWDVPPNVITYNILICSFCAIGDVSRSTHLLRQMK 597

Query: 239 VSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLINGAFRSLSPH 60
           + G  P+ F++  LI GY   N+  +A ++ D+M R  ++P+  TY +LI    +S    
Sbjct: 598 LHGIQPDTFSFNALIQGYTGKNRFQKAEKLFDSMLRLGIQPDNYTYGALIKSLCKSGRHD 657

Query: 59  KAFHLLYEFLE 27
           KA  +     E
Sbjct: 658 KAREIFLSMKE 668



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 42/147 (28%), Positives = 76/147 (51%)
 Frame = -3

Query: 443 GLVVGTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEA 264
           G+  G   Y  +I+AL K+  +++      ++  D    + ++YN++I  +CK   +D A
Sbjct: 425 GVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLINDGLISNIYSYNMVIDCLCKGKSMDRA 484

Query: 263 LQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLING 84
            ++ + +   G SPN+ TY  LI G+C    +D+A  +L+ +     +P+  T+ SLI+G
Sbjct: 485 SEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMDKAQELLEMLLESRFRPDIFTFNSLIDG 544

Query: 83  AFRSLSPHKAFHLLYEFLERDAKLPNV 3
             ++     AF    E +E D   PNV
Sbjct: 545 LCQAHKHENAFGCFTEMVEWDVP-PNV 570



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 35/131 (26%), Positives = 60/131 (45%)
 Frame = -3

Query: 419 YNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEALQLMKQME 240
           +N  +  ++K   L +    F        +P   TY  LI  + K G ++   + M ++ 
Sbjct: 398 FNITLACVLKKLDLKVTCTVFDNCVQSGVKPGFSTYLTLIEALYKAGKMEIGNRYMDRLI 457

Query: 239 VSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLINGAFRSLSPH 60
             G   N+++Y ++ID  C    +D A  +   ++ R + PN  TY +LI G  R+ +  
Sbjct: 458 NDGLISNIYSYNMVIDCLCKGKSMDRASEMFRDLHNRGISPNIVTYNTLIGGFCRNGNMD 517

Query: 59  KAFHLLYEFLE 27
           KA  LL   LE
Sbjct: 518 KAQELLEMLLE 528


>ref|NP_188314.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75274022|sp|Q9LSQ2.1|PP239_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At3g16890, mitochondrial; AltName: Full=Protein
           PENTATRICOPEPTIDE REPEAT 40; Flags: Precursor
           gi|7670019|dbj|BAA94973.1| salt-inducible protein-like
           [Arabidopsis thaliana] gi|332642359|gb|AEE75880.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 659

 Score =  198 bits (504), Expect = 3e-49
 Identities = 98/149 (65%), Positives = 117/149 (78%)
 Frame = -3

Query: 449 YLGLVVGTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVD 270
           +LG+   TRLYNAVIDALVKSNSLDLAYLKFQQM+ D C+PDRFTYNILIHGVCK GVVD
Sbjct: 173 FLGMKPSTRLYNAVIDALVKSNSLDLAYLKFQQMRSDGCKPDRFTYNILIHGVCKKGVVD 232

Query: 269 EALQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLI 90
           EA++L+KQME  G  PNVFTYTILIDG+  A +VDEA + L+ M  R + PNEAT R+ +
Sbjct: 233 EAIRLVKQMEQEGNRPNVFTYTILIDGFLIAGRVDEALKQLEMMRVRKLNPNEATIRTFV 292

Query: 89  NGAFRSLSPHKAFHLLYEFLERDAKLPNV 3
           +G FR L P KAF +L  F+E+D+ L  V
Sbjct: 293 HGIFRCLPPCKAFEVLVGFMEKDSNLQRV 321



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 41/138 (29%), Positives = 73/138 (52%)
 Frame = -3

Query: 419 YNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEALQLMKQME 240
           ++ +I+ L ++  +  A+  F++M      P+  TYNILI   C  G  D +++L  +M+
Sbjct: 498 FSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMK 557

Query: 239 VSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLINGAFRSLSPH 60
            +G SP+++ Y   I  +C   KV +A  +L TM R  +KP+  TY +LI     S    
Sbjct: 558 ENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRES 617

Query: 59  KAFHLLYEFLERDAKLPN 6
           +A   ++  +ER   +P+
Sbjct: 618 EA-REMFSSIERHGCVPD 634



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/118 (31%), Positives = 64/118 (54%)
 Frame = -3

Query: 443 GLVVGTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEA 264
           GL+     YNAVID L K+  ++ A +   +MQ     P+  T+N  + G    G V + 
Sbjct: 420 GLLSSVYSYNAVIDCLCKARRIENAAMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKV 479

Query: 263 LQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLI 90
             +++++ V G+ P+V T++++I+  C A ++ +AF     M    ++PNE TY  LI
Sbjct: 480 HGVLEKLLVHGFKPDVITFSLIINCLCRAKEIKDAFDCFKEMLEWGIEPNEITYNILI 537



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 36/139 (25%), Positives = 62/139 (44%)
 Frame = -3

Query: 443 GLVVGTRLYNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEA 264
           G+  G   Y  ++ AL+ +          +QM VD      ++YN +I  +CK   ++ A
Sbjct: 385 GVKPGFNGYLVLVQALLNAQRFSEGDRYLKQMGVDGLLSSVYSYNAVIDCLCKARRIENA 444

Query: 263 LQLMKQMEVSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYRSLING 84
              + +M+  G SPN+ T+   + GY     V +   +L+ +     KP+  T+  +IN 
Sbjct: 445 AMFLTEMQDRGISPNLVTFNTFLSGYSVRGDVKKVHGVLEKLLVHGFKPDVITFSLIINC 504

Query: 83  AFRSLSPHKAFHLLYEFLE 27
             R+     AF    E LE
Sbjct: 505 LCRAKEIKDAFDCFKEMLE 523



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 31/107 (28%), Positives = 51/107 (47%)
 Frame = -3

Query: 419 YNAVIDALVKSNSLDLAYLKFQQMQVDNCRPDRFTYNILIHGVCKVGVVDEALQLMKQME 240
           YN +I +   +   D +   F +M+ +   PD + YN  I   CK+  V +A +L+K M 
Sbjct: 533 YNILIRSCCSTGDTDRSVKLFAKMKENGLSPDLYAYNATIQSFCKMRKVKKAEELLKTML 592

Query: 239 VSGYSPNVFTYTILIDGYCNANKVDEAFRILDTMNRRNVKPNEATYR 99
             G  P+ FTY+ LI     + +  EA  +  ++ R    P+  T R
Sbjct: 593 RIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERHGCVPDSYTKR 639