BLASTX nr result

ID: Bupleurum21_contig00020781 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020781
         (526 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299211.1| predicted protein [Populus trichocarpa] gi|2...   186   2e-45
ref|XP_002513070.1| DNA binding protein, putative [Ricinus commu...   185   4e-45
ref|XP_003541598.1| PREDICTED: probable ADP-ribosylation factor ...   184   5e-45
ref|NP_187451.2| putative ADP-ribosylation factor GTPase-activat...   184   7e-45
ref|XP_002882559.1| hypothetical protein ARALYDRAFT_478135 [Arab...   184   7e-45

>ref|XP_002299211.1| predicted protein [Populus trichocarpa] gi|222846469|gb|EEE84016.1|
           predicted protein [Populus trichocarpa]
          Length = 358

 Score =  186 bits (471), Expect = 2e-45
 Identities = 91/149 (61%), Positives = 116/149 (77%), Gaps = 2/149 (1%)
 Frame = -3

Query: 443 GNAFRHNW--RXXXXXXXXXXXSTIGMVEFVGLVKINMVRGSNLAVRDMRTSDPYLIFSL 270
           GNAFR++W  +           S  GMVEF+GL+K+N+V+G+NLAVRD+ TSDPY+I SL
Sbjct: 171 GNAFRNSWGRKDSEHKHTKKSYSLAGMVEFIGLIKVNVVKGTNLAVRDVMTSDPYVIISL 230

Query: 269 GSQSVKTHAVKNSLNPVWKEMLMLSIPDNIPPLKLHVYDKDTFTTDDYMGEAEIDLHPLV 90
           G QSV+T  +KN+LNP+W E LMLSIP+ IPPLK+ VYDKDTFTTDD+MGEAEID+ PLV
Sbjct: 231 GQQSVRTRVIKNNLNPIWNESLMLSIPEQIPPLKVLVYDKDTFTTDDFMGEAEIDIQPLV 290

Query: 89  SAAKASDTAKSGEAMELGKLSASEENTLV 3
           +AAKA + +   E+M+LGK  A +ENTLV
Sbjct: 291 AAAKAYENSTITESMQLGKWIAGQENTLV 319


>ref|XP_002513070.1| DNA binding protein, putative [Ricinus communis]
           gi|223548081|gb|EEF49573.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 382

 Score =  185 bits (469), Expect = 4e-45
 Identities = 93/149 (62%), Positives = 117/149 (78%), Gaps = 2/149 (1%)
 Frame = -3

Query: 443 GNAFRHNW--RXXXXXXXXXXXSTIGMVEFVGLVKINMVRGSNLAVRDMRTSDPYLIFSL 270
           GNAFR++W  +           S  GMVEFVGL+K+N+V+G+NLAVRD+ TSDPY+I SL
Sbjct: 195 GNAFRNSWGRKDSENKQSKKSNSMAGMVEFVGLIKVNVVKGTNLAVRDVVTSDPYVILSL 254

Query: 269 GSQSVKTHAVKNSLNPVWKEMLMLSIPDNIPPLKLHVYDKDTFTTDDYMGEAEIDLHPLV 90
           G QSV+T  +KN+LNPVW E LMLSIPD+IP LK+ VYDKDTFTTDD+MGEAEID+ PLV
Sbjct: 255 GHQSVRTRVIKNNLNPVWNESLMLSIPDHIPALKVLVYDKDTFTTDDFMGEAEIDIQPLV 314

Query: 89  SAAKASDTAKSGEAMELGKLSASEENTLV 3
           +AAKA +T+   E M+LGK  AS++NTL+
Sbjct: 315 AAAKAYETSTINEPMQLGKWVASKDNTLL 343


>ref|XP_003541598.1| PREDICTED: probable ADP-ribosylation factor GTPase-activating
           protein AGD11-like [Glycine max]
          Length = 368

 Score =  184 bits (468), Expect = 5e-45
 Identities = 92/149 (61%), Positives = 116/149 (77%), Gaps = 2/149 (1%)
 Frame = -3

Query: 443 GNAFRHNWRXXXXXXXXXXXST--IGMVEFVGLVKINMVRGSNLAVRDMRTSDPYLIFSL 270
           GNAFR++W            ST   GMVEFVGL+K+N+V+G++LA+RD+ TSDPY+I SL
Sbjct: 181 GNAFRNSWGRKDSEHKAAKKSTSLAGMVEFVGLIKVNVVKGTHLAIRDVMTSDPYVILSL 240

Query: 269 GSQSVKTHAVKNSLNPVWKEMLMLSIPDNIPPLKLHVYDKDTFTTDDYMGEAEIDLHPLV 90
           G QSVKT  +K++LNPVW E LMLSIP+NIPPLK+ VYDKDTF+TDD+MGEAEID+ PLV
Sbjct: 241 GHQSVKTRVIKSNLNPVWNESLMLSIPENIPPLKVLVYDKDTFSTDDFMGEAEIDIQPLV 300

Query: 89  SAAKASDTAKSGEAMELGKLSASEENTLV 3
            AAKA + +   E+M+LGK  AS +NTLV
Sbjct: 301 IAAKAYEKSNINESMQLGKFVASNDNTLV 329


>ref|NP_187451.2| putative ADP-ribosylation factor GTPase-activating protein AGD11
           [Arabidopsis thaliana]
           gi|75154127|sp|Q8L7A4.1|AGD11_ARATH RecName:
           Full=Probable ADP-ribosylation factor GTPase-activating
           protein AGD11; Short=ARF GAP AGD11; AltName:
           Full=Protein ARF-GAP DOMAIN 11; Short=AtAGD11
           gi|22531086|gb|AAM97047.1| putative GTPase-activating
           protein [Arabidopsis thaliana]
           gi|25083805|gb|AAN72120.1| putative GTPase-activating
           protein [Arabidopsis thaliana]
           gi|332641102|gb|AEE74623.1| putative ADP-ribosylation
           factor GTPase-activating protein AGD11 [Arabidopsis
           thaliana]
          Length = 385

 Score =  184 bits (467), Expect = 7e-45
 Identities = 93/149 (62%), Positives = 116/149 (77%), Gaps = 2/149 (1%)
 Frame = -3

Query: 443 GNAFRHNW--RXXXXXXXXXXXSTIGMVEFVGLVKINMVRGSNLAVRDMRTSDPYLIFSL 270
           G+AFR++W  R           S  GMVEFVGL+K+N+V+G+NLAVRD+ TSDPY+I +L
Sbjct: 198 GHAFRNSWGRRESDHKGPKKSNSMAGMVEFVGLIKVNVVKGTNLAVRDVMTSDPYVILAL 257

Query: 269 GSQSVKTHAVKNSLNPVWKEMLMLSIPDNIPPLKLHVYDKDTFTTDDYMGEAEIDLHPLV 90
           G QSVKT  +KN+LNPVW E LMLSIP+ +PPLK+ VYDKDTF+TDD+MGEAEID+ PLV
Sbjct: 258 GQQSVKTRVIKNNLNPVWNETLMLSIPEPMPPLKVLVYDKDTFSTDDFMGEAEIDIQPLV 317

Query: 89  SAAKASDTAKSGEAMELGKLSASEENTLV 3
           SAAKA +T+   E M+LG   AS+ENTLV
Sbjct: 318 SAAKAYETSSIKEPMQLGSWVASKENTLV 346


>ref|XP_002882559.1| hypothetical protein ARALYDRAFT_478135 [Arabidopsis lyrata subsp.
           lyrata] gi|297328399|gb|EFH58818.1| hypothetical protein
           ARALYDRAFT_478135 [Arabidopsis lyrata subsp. lyrata]
          Length = 383

 Score =  184 bits (467), Expect = 7e-45
 Identities = 93/149 (62%), Positives = 116/149 (77%), Gaps = 2/149 (1%)
 Frame = -3

Query: 443 GNAFRHNW--RXXXXXXXXXXXSTIGMVEFVGLVKINMVRGSNLAVRDMRTSDPYLIFSL 270
           G+AFR++W  R           S  GMVEFVGL+K+N+V+G+NLAVRD+ TSDPY+I +L
Sbjct: 196 GHAFRNSWGRRESDHKGPKKSNSMAGMVEFVGLIKVNVVKGTNLAVRDVMTSDPYVILAL 255

Query: 269 GSQSVKTHAVKNSLNPVWKEMLMLSIPDNIPPLKLHVYDKDTFTTDDYMGEAEIDLHPLV 90
           G QSVKT  +KN+LNPVW E LMLSIP+ +PPLK+ VYDKDTF+TDD+MGEAEID+ PLV
Sbjct: 256 GQQSVKTRVIKNNLNPVWNETLMLSIPEPMPPLKVLVYDKDTFSTDDFMGEAEIDIQPLV 315

Query: 89  SAAKASDTAKSGEAMELGKLSASEENTLV 3
           SAAKA +T+   E M+LG   AS+ENTLV
Sbjct: 316 SAAKAYETSSIKEPMQLGSWVASKENTLV 344


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