BLASTX nr result

ID: Bupleurum21_contig00020773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020773
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264591.1| PREDICTED: uncharacterized membrane protein ...    64   1e-08
ref|XP_002264502.1| PREDICTED: uncharacterized membrane protein ...    64   1e-08
ref|XP_002331553.1| predicted protein [Populus trichocarpa] gi|2...    62   6e-08
ref|XP_002317144.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
gb|ABK96436.1| unknown [Populus trichocarpa x Populus deltoides]       61   8e-08

>ref|XP_002264591.1| PREDICTED: uncharacterized membrane protein C24H6.13 isoform 2
           [Vitis vinifera]
          Length = 766

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/66 (54%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = -3

Query: 319 IHPVFKGGXXXXXXXXDMIELHEKWE--PELVPTKRQSRRNTPAPSKISGGSSKSMHDVF 146
           IHPVFK             E+H KWE   ELVPTKRQSRRNTP PSK SG SS S+ +V 
Sbjct: 706 IHPVFKSAEDDEEE-----EIHGKWEHDAELVPTKRQSRRNTPLPSKFSGSSSPSLPEVV 760

Query: 145 LENSKP 128
            E  +P
Sbjct: 761 EERGQP 766


>ref|XP_002264502.1| PREDICTED: uncharacterized membrane protein C24H6.13 isoform 1
           [Vitis vinifera] gi|302144095|emb|CBI23200.3| unnamed
           protein product [Vitis vinifera]
          Length = 771

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 36/66 (54%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
 Frame = -3

Query: 319 IHPVFKGGXXXXXXXXDMIELHEKWE--PELVPTKRQSRRNTPAPSKISGGSSKSMHDVF 146
           IHPVFK             E+H KWE   ELVPTKRQSRRNTP PSK SG SS S+ +V 
Sbjct: 711 IHPVFKSAEDDEEE-----EIHGKWEHDAELVPTKRQSRRNTPLPSKFSGSSSPSLPEVV 765

Query: 145 LENSKP 128
            E  +P
Sbjct: 766 EERGQP 771


>ref|XP_002331553.1| predicted protein [Populus trichocarpa] gi|222873777|gb|EEF10908.1|
           predicted protein [Populus trichocarpa]
          Length = 805

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 35/64 (54%), Positives = 42/64 (65%)
 Frame = -3

Query: 319 IHPVFKGGXXXXXXXXDMIELHEKWEPELVPTKRQSRRNTPAPSKISGGSSKSMHDVFLE 140
           +HPVFKGG         +    E  E  LVPTKRQSRRNTPAPSKISGGSS S+ +  ++
Sbjct: 744 VHPVFKGGDDDIDEDDLLSGKMET-ESVLVPTKRQSRRNTPAPSKISGGSSPSLPET-VK 801

Query: 139 NSKP 128
           N +P
Sbjct: 802 NGEP 805


>ref|XP_002317144.1| predicted protein [Populus trichocarpa] gi|222860209|gb|EEE97756.1|
           predicted protein [Populus trichocarpa]
          Length = 772

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/66 (56%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
 Frame = -3

Query: 319 IHPVFKGGXXXXXXXXDMIELHEKWEPE--LVPTKRQSRRNTPAPSKISGGSSKSMHDVF 146
           IHPVFKGG           +L +K E E  LVPTKRQSR+NTPAPSKISG SS S+ +V 
Sbjct: 713 IHPVFKGGDDDEDD-----DLSKKLETESVLVPTKRQSRKNTPAPSKISGASSPSLFEV- 766

Query: 145 LENSKP 128
           ++N  P
Sbjct: 767 VKNGDP 772


>gb|ABK96436.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 252

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 37/66 (56%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
 Frame = -3

Query: 319 IHPVFKGGXXXXXXXXDMIELHEKWEPE--LVPTKRQSRRNTPAPSKISGGSSKSMHDVF 146
           IHPVFKGG           +L +K E E  LVPTKRQSR+NTPAPSKISG SS S+ +V 
Sbjct: 193 IHPVFKGGDGDEDD-----DLSKKLETESVLVPTKRQSRKNTPAPSKISGASSPSLFEV- 246

Query: 145 LENSKP 128
           ++N  P
Sbjct: 247 VKNGDP 252


Top