BLASTX nr result

ID: Bupleurum21_contig00020759 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020759
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282025.2| PREDICTED: uncharacterized protein LOC100257...   166   1e-38
ref|XP_002324827.1| predicted protein [Populus trichocarpa] gi|2...   157   3e-36
gb|AEV42257.1| aminoacyl-tRNA synthetase [Beta vulgaris]              157   4e-36
ref|XP_002309577.1| predicted protein [Populus trichocarpa] gi|2...   154   4e-35
dbj|BAE71190.1| aminoacyl-tRNA synthetase [Trifolium pratense]        141   3e-31

>ref|XP_002282025.2| PREDICTED: uncharacterized protein LOC100257807 [Vitis vinifera]
           gi|296081950|emb|CBI20955.3| unnamed protein product
           [Vitis vinifera]
          Length = 340

 Score =  166 bits (419), Expect = 1e-38
 Identities = 92/198 (46%), Positives = 122/198 (61%), Gaps = 5/198 (2%)
 Frame = +1

Query: 7   YKQLEPTTRLVMLKALCEIRIKQDDAVSYINNAIKAGSEVSKFRKDKICGDETGTSYWLD 186
           YK+L+PT RL +LKALCEIR +Q+D VSYIN+AIK G+E+S FRK+ I GD  GT+YW D
Sbjct: 143 YKELDPTIRLQILKALCEIRAEQNDTVSYINDAIKHGTELSCFRKNNIGGDRNGTTYWYD 202

Query: 187 GNASIGYRLYKEVREVESVQNDQGKG--FPQETNIQWETLATSLXXXXXXXXXXLSGETR 360
           GN  +G+RLY+EV++ +     +GKG   P   + +WETLAT+L           S +  
Sbjct: 203 GNTVLGHRLYREVKKFDPKTKVRGKGCLAPPLASFKWETLATNLEEFRKVADDFSSSKVT 262

Query: 361 LEVDVCKTVEATVIPALEKLQMXXXXXXXXXXXXXXLLNDSGNS---GLPCTSRPRKPMS 531
           ++V V K V+   IP LE LQ               LLNDS NS       + R R+P+S
Sbjct: 263 VQVAVSKIVQTDAIPVLEDLQKKKERAFKRKRRQEMLLNDSQNSYRVESTRSCRNRRPVS 322

Query: 532 YTFDEYDKTISEAISRSQ 585
           YTFDEYD+TI EAI  ++
Sbjct: 323 YTFDEYDRTIKEAIQMTK 340


>ref|XP_002324827.1| predicted protein [Populus trichocarpa] gi|222866261|gb|EEF03392.1|
           predicted protein [Populus trichocarpa]
          Length = 488

 Score =  157 bits (397), Expect = 3e-36
 Identities = 85/200 (42%), Positives = 120/200 (60%), Gaps = 4/200 (2%)
 Frame = +1

Query: 1   SGYKQLEPTTRLVMLKALCEIRIKQDDAVSYINNAIKAGSEVSKFRKDKICGDETGTSYW 180
           S YK+L+PT RL++LKALCEIR +QDD  SY+N ++K G+E+S FRKDK+ GD T  SYW
Sbjct: 123 SEYKELDPTNRLLILKALCEIRAEQDDIASYVNTSLKDGTEISYFRKDKVGGDGTAISYW 182

Query: 181 LDGNASIGYRLYKEVREVESVQNDQGKGFPQ--ETNIQWETLATSLXXXXXXXXXXLSGE 354
            DG+++IG+RLYKEV    +    +GK       T +QWE LAT+L           S +
Sbjct: 183 YDGSSTIGHRLYKEVNMTRANIRMKGKASKNLPATCLQWEILATNLEGFQKVVNELSSSK 242

Query: 355 TRLEVDVCKTVEATVIPALEKLQMXXXXXXXXXXXXXXLLND--SGNSGLPCTSRPRKPM 528
              +V   KT+E  V+P ++K Q               LLN   S  +G+  + R R+P+
Sbjct: 243 VVADVAAGKTIETDVLPIIQKFQKKKDRALKQKERQEELLNSFRSYTAGITRSCRSRRPI 302

Query: 529 SYTFDEYDKTISEAISRSQR 588
           SYTFD+YD+ I EAI  +++
Sbjct: 303 SYTFDDYDRAIDEAIKITKK 322


>gb|AEV42257.1| aminoacyl-tRNA synthetase [Beta vulgaris]
          Length = 597

 Score =  157 bits (396), Expect = 4e-36
 Identities = 85/186 (45%), Positives = 114/186 (61%), Gaps = 4/186 (2%)
 Frame = +1

Query: 1   SGYKQLEPTTRLVMLKALCEIRIKQDDAVSYINNAIKAGSEVSKFRKDKICGDETGTSYW 180
           S YK+L+PT RL+MLKALCE+RI+Q D VSYIN A+K G ++S FRKDKI  D  G SYW
Sbjct: 127 SRYKELDPTIRLLMLKALCEVRIEQPDLVSYINGALKQGDQISNFRKDKIGQDRNGISYW 186

Query: 181 LDGNASIGYRLYKEVREVESVQNDQGKGF--PQETNIQWETLATSLXXXXXXXXXXLSGE 354
            DGN+ IG+RLY+EV  V   Q  +GK     QETN++WETLAT++           + +
Sbjct: 187 YDGNSVIGHRLYREVNNVNLKQKQRGKNCLDLQETNLKWETLATNIEEFRKVSEKLSACQ 246

Query: 355 TRLEVDVCKTVEATVIPALEKLQMXXXXXXXXXXXXXXLLNDSGN--SGLPCTSRPRKPM 528
             +E  V +T+E  VIP LEK+Q                LN S    +G+  + R R+P+
Sbjct: 247 VGVEAAVHETIETEVIPVLEKVQKNKERNLKRRQRQEAFLNGSHTYAAGVTRSCRTRRPV 306

Query: 529 SYTFDE 546
           +YTFD+
Sbjct: 307 TYTFDK 312


>ref|XP_002309577.1| predicted protein [Populus trichocarpa] gi|222855553|gb|EEE93100.1|
           predicted protein [Populus trichocarpa]
          Length = 515

 Score =  154 bits (388), Expect = 4e-35
 Identities = 86/206 (41%), Positives = 121/206 (58%), Gaps = 8/206 (3%)
 Frame = +1

Query: 1   SGYKQLEPTTRLVMLKALCEIRIKQDDAVSYINNAIKAGSEVSKFRKDKICGDETGTSYW 180
           S YK+L+P  RL++LKALCE+R KQ+D  SY+N+++K G+E+S FRKDKI  D T TSYW
Sbjct: 117 SRYKELDPANRLLILKALCELRAKQNDIASYVNDSLKDGTEISYFRKDKIGVDGTATSYW 176

Query: 181 LDGNASIGYRLYKEVREVESVQNDQGKGFPQE--TNIQWETLATSLXXXXXXXXXXLSGE 354
            DG++ IG+RLYK+V +  +    +GK    +  T  QWE LAT+L           S +
Sbjct: 177 YDGSSVIGHRLYKQVNKTGANSRMRGKASKNQPATCFQWEILATNLEEFQKVVNELSSSK 236

Query: 355 TRLEVDVCKTVEATVIPALEKLQMXXXXXXXXXXXXXXLLNDSGNSGLPCTS------RP 516
              +V   KT+E  V+P ++K Q               LL    NS  PCT+      R 
Sbjct: 237 VTAQVAAGKTIETDVLPIIQKFQKKKDRALKQKERQEKLL----NSFRPCTAGVTRSCRS 292

Query: 517 RKPMSYTFDEYDKTISEAISRSQRGK 594
           R+P+SYTFD+YD+ I EAI  +++ K
Sbjct: 293 RRPISYTFDDYDRAIDEAIKITKKRK 318


>dbj|BAE71190.1| aminoacyl-tRNA synthetase [Trifolium pratense]
          Length = 745

 Score =  141 bits (355), Expect = 3e-31
 Identities = 74/203 (36%), Positives = 119/203 (58%), Gaps = 7/203 (3%)
 Frame = +1

Query: 7   YKQLEPTTRLVMLKALCEIRIKQDDAVSYINNAIKAGSEVSKFRKDKICGDETGTSYWLD 186
           YK L+P  R+++LKALC+IR++Q+D  +YI+N+IK G+++S FRK++I GD  G SYW +
Sbjct: 218 YKSLDPAVRVIILKALCDIRVEQEDIRNYIDNSIKHGAQLSTFRKERIGGDSNGISYWYE 277

Query: 187 GNASIGYRLYKEVREVESVQNDQGKGFPQE----TNIQWETLATSLXXXXXXXXXXLSGE 354
            +  IG+RLY+E+R+ E  Q  +GK    +    T+ QWE +AT+            S +
Sbjct: 278 DDPMIGHRLYREIRKTEVTQPRKGKPRGSQVLSSTSYQWEAVATNFDEFQDVSEKLFSSK 337

Query: 355 TRLEVDVCKTVEATVIPALEKLQMXXXXXXXXXXXXXXLLND---SGNSGLPCTSRPRKP 525
            R E  V K ++  ++P +EK+                LL++   +         R RKP
Sbjct: 338 NRTETSVGKKLKIDMLPEIEKVHKKKERLLKKQHREALLLDNYMIADGISAGRALRDRKP 397

Query: 526 MSYTFDEYDKTISEAISRSQRGK 594
           ++YTFD+YD++I+EAI  ++R K
Sbjct: 398 VTYTFDDYDRSINEAIKVTKRNK 420


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