BLASTX nr result

ID: Bupleurum21_contig00020749 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020749
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330243.1| predicted protein [Populus trichocarpa] gi|2...   157   1e-36
ref|XP_002512487.1| conserved hypothetical protein [Ricinus comm...   146   2e-33
ref|XP_003558103.1| PREDICTED: uncharacterized protein LOC100840...   142   4e-32
emb|CBI39569.3| unnamed protein product [Vitis vinifera]              141   5e-32
emb|CAN82842.1| hypothetical protein VITISV_019567 [Vitis vinifera]   141   5e-32

>ref|XP_002330243.1| predicted protein [Populus trichocarpa] gi|222871699|gb|EEF08830.1|
           predicted protein [Populus trichocarpa]
          Length = 582

 Score =  157 bits (396), Expect = 1e-36
 Identities = 84/185 (45%), Positives = 117/185 (63%), Gaps = 8/185 (4%)
 Frame = +3

Query: 3   GDDESDVPPRDQRQRLLLPSIYGDFTSRSLHEFVPILEPFLRSVVRDELDLTIQRVYHSS 182
           GD  +   P  Q  +    ++       S+ + V  +EPFLR+V+RDE++ T+QRV  SS
Sbjct: 13  GDGIAMGAPAAQESKRFKNAVRDVMGKLSVSDLVSEMEPFLRAVIRDEVERTVQRVLQSS 72

Query: 183 PRS--------VSRDCQLDFQNKLPSILFTCTKIGSVDGGPIKVVLVDPTSKTTITSGPL 338
             S        V R   L F NKLP  +FT  KI + D  P+ +VL+D  + T +TSGPL
Sbjct: 73  SSSSLNQPQTSVKRGLMLQFVNKLPPTIFTGGKIEAEDDKPVTIVLMDANTNTIVTSGPL 132

Query: 339 SSMKIEIVVLNGDFVADERENWTEEDFKRCIIREREGKRPLVTGDLIITLKDGVADVDNI 518
           +S+KIEIV L+ DF +D++E+WTE +F   +IREREG+RPLVTGDL ITL+DGV  + ++
Sbjct: 133 ASLKIEIVPLDADFGSDDQEDWTESEFAARVIREREGRRPLVTGDLAITLRDGVGQLGDM 192

Query: 519 CFTDN 533
            FTDN
Sbjct: 193 VFTDN 197


>ref|XP_002512487.1| conserved hypothetical protein [Ricinus communis]
           gi|223548448|gb|EEF49939.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 514

 Score =  146 bits (369), Expect = 2e-33
 Identities = 78/158 (49%), Positives = 105/158 (66%), Gaps = 9/158 (5%)
 Frame = +3

Query: 87  SLHEFVPILEPFLRSVVRDELDLTIQRVYHSSPR--------SVSRDCQLDFQNKLPSIL 242
           S+ +    +EPFLR VVRDE++ T+ R+ H S R        +  R   L F NK PS +
Sbjct: 38  SVEDMAAKMEPFLRRVVRDEVERTVCRILHPSFRPPFNQNETTGGRGFLLRFVNKPPSTI 97

Query: 243 FTCTKIGSVDGGPIKVVLVDPTSKTTITSGPLSSMKIEIVVLNGDFVADERENWTEEDFK 422
           FT ++I + DG PI++ L D   KT +TSGPLS MKIEI+VLNGDF  D+ E+W+E +F 
Sbjct: 98  FTNSRIEAEDGSPIRIELWDANRKTLVTSGPLSCMKIEILVLNGDFGLDDLEDWSETEFN 157

Query: 423 RCIIREREGKRPLVT-GDLIITLKDGVADVDNICFTDN 533
             +IREREG+RPLVT GDL +TL+ GV  + ++ FTDN
Sbjct: 158 ASVIREREGRRPLVTGGDLNVTLRGGVVSISDVAFTDN 195


>ref|XP_003558103.1| PREDICTED: uncharacterized protein LOC100840855 [Brachypodium
           distachyon]
          Length = 488

 Score =  142 bits (357), Expect = 4e-32
 Identities = 81/185 (43%), Positives = 118/185 (63%), Gaps = 8/185 (4%)
 Frame = +3

Query: 3   GDDESDVPPRDQRQRLLL--PSIYGDFTSRSLHEFVPILEPFLRSVVRDELDLTIQRVYH 176
           GD+E    P  +R+R LL   S+     ++ +   +P LEPFLR VV++E+   + R   
Sbjct: 17  GDEEELASPDAKRRRTLLNSSSMQEAIGAQYMQRHLPKLEPFLRRVVQEEVHNVLIRHID 76

Query: 177 SSPR------SVSRDCQLDFQNKLPSILFTCTKIGSVDGGPIKVVLVDPTSKTTITSGPL 338
           S+ R      + S+  +L FQ  LP  LFT  ++ + +  P+++VL D  +  TITSGPL
Sbjct: 77  SAHRLPLQLKTSSKRYKLQFQGNLPQTLFTGNRVEAENKQPLRIVLTDAVNNQTITSGPL 136

Query: 339 SSMKIEIVVLNGDFVADERENWTEEDFKRCIIREREGKRPLVTGDLIITLKDGVADVDNI 518
           SSMK+E++VL+GDF ADER   TE++F   I+ EREGKRPL++G++II L+ GVA V +I
Sbjct: 137 SSMKVELLVLDGDFNADERLEHTEKEFSESIVFEREGKRPLLSGEVIIVLEKGVASVRDI 196

Query: 519 CFTDN 533
            FTDN
Sbjct: 197 SFTDN 201


>emb|CBI39569.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  141 bits (356), Expect = 5e-32
 Identities = 82/188 (43%), Positives = 119/188 (63%), Gaps = 11/188 (5%)
 Frame = +3

Query: 3   GDDESDVPPRDQR-QRLLLPSIYGDFTS-RSLHEFVPILEPFLRSVVRDELDLTIQRVYH 176
           GDD+  V  + ++ +R    S   D  S R L E    +EPF R +VR+E++   +   +
Sbjct: 19  GDDDFGVAGQGEKMKRFKFASAVRDVMSERLLKEMALRMEPFFRVLVREEVERASRLFLN 78

Query: 177 SSPRSVS--------RDCQLDFQNKLPSILFTCTKIGSVDGGPIKVVLVDPTSKTTITSG 332
           +SP   S        R+ QL F +KLPS +FT +++ +     +K+V++D  SK  ITSG
Sbjct: 79  ASPGPSSNQIESSGVRNWQLHFASKLPSKIFTGSRVEAEGSTSVKIVILDARSKDIITSG 138

Query: 333 PLSSMKIEIVVLNGDF-VADERENWTEEDFKRCIIREREGKRPLVTGDLIITLKDGVADV 509
           PLSS+KIEI+VL+GDF   D+ E+WTE +F   I+REREGKRPLVTG+L +TL+ GV  +
Sbjct: 139 PLSSVKIEILVLDGDFGTTDDNEDWTESEFNTNIVREREGKRPLVTGELFVTLRCGVGYI 198

Query: 510 DNICFTDN 533
           D++ FTDN
Sbjct: 199 DDVSFTDN 206


>emb|CAN82842.1| hypothetical protein VITISV_019567 [Vitis vinifera]
          Length = 586

 Score =  141 bits (356), Expect = 5e-32
 Identities = 82/188 (43%), Positives = 119/188 (63%), Gaps = 11/188 (5%)
 Frame = +3

Query: 3   GDDESDVPPRDQR-QRLLLPSIYGDFTS-RSLHEFVPILEPFLRSVVRDELDLTIQRVYH 176
           GDD+  V  + ++ +R    S   D  S R L E    +EPF R +VR+E++   +   +
Sbjct: 17  GDDDFGVAGQGEKMKRFKFASAVRDVMSERLLKEMALRMEPFFRVLVREEVERASRLFLN 76

Query: 177 SSPRSVS--------RDCQLDFQNKLPSILFTCTKIGSVDGGPIKVVLVDPTSKTTITSG 332
           +SP   S        R+ QL F +KLPS +FT +++ +     +K+V++D  SK  ITSG
Sbjct: 77  ASPGPSSNQIESSGVRNWQLHFASKLPSKIFTGSRVEAEGSTSVKIVILDARSKDIITSG 136

Query: 333 PLSSMKIEIVVLNGDF-VADERENWTEEDFKRCIIREREGKRPLVTGDLIITLKDGVADV 509
           PLSS+KIEI+VL+GDF   D+ E+WTE +F   I+REREGKRPLVTG+L +TL+ GV  +
Sbjct: 137 PLSSVKIEILVLDGDFGTTDDNEDWTESEFNTNIVREREGKRPLVTGELFVTLRCGVGYI 196

Query: 510 DNICFTDN 533
           D++ FTDN
Sbjct: 197 DDVSFTDN 204


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