BLASTX nr result

ID: Bupleurum21_contig00020741 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020741
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37573.3| unnamed protein product [Vitis vinifera]               74   1e-11
ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-l...    74   1e-11
ref|XP_003630201.1| WD repeat-containing protein [Medicago trunc...    66   3e-09
ref|XP_003602569.1| WD repeat-containing protein, putative [Medi...    65   6e-09
ref|XP_004148673.1| PREDICTED: uncharacterized protein LOC101207...    64   1e-08

>emb|CBI37573.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = -1

Query: 282 GVSVAIPWCSKKLNQKGCAYTPWCYVQK-QDHQDSTLCIRESEGFSLANWLFIDGSYKHA 106
           GVSVAIPW      +KG            QDH ++T  IR+SE FSL NW  +DGS +  
Sbjct: 540 GVSVAIPWSDTGAEKKGLGSDSLRQSPPTQDHLEATSWIRDSERFSLGNWFSMDGSCRGG 599

Query: 105 ATWPEDKLPVWNEAPPEQNYLSNHHD 28
           ATWPE+KLP+W    PE ++  +HHD
Sbjct: 600 ATWPEEKLPLW--GAPEHDH--HHHD 621


>ref|XP_002275497.1| PREDICTED: WD repeat-containing protein 44-like [Vitis vinifera]
          Length = 674

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 40/86 (46%), Positives = 51/86 (59%), Gaps = 1/86 (1%)
 Frame = -1

Query: 282 GVSVAIPWCSKKLNQKGCAYTPWCYVQK-QDHQDSTLCIRESEGFSLANWLFIDGSYKHA 106
           GVSVAIPW      +KG            QDH ++T  IR+SE FSL NW  +DGS +  
Sbjct: 546 GVSVAIPWSDTGAEKKGLGSDSLRQSPPTQDHLEATSWIRDSERFSLGNWFSMDGSCRGG 605

Query: 105 ATWPEDKLPVWNEAPPEQNYLSNHHD 28
           ATWPE+KLP+W    PE ++  +HHD
Sbjct: 606 ATWPEEKLPLW--GAPEHDH--HHHD 627


>ref|XP_003630201.1| WD repeat-containing protein [Medicago truncatula]
           gi|357519897|ref|XP_003630237.1| WD repeat-containing
           protein [Medicago truncatula]
           gi|355524223|gb|AET04677.1| WD repeat-containing protein
           [Medicago truncatula] gi|355524259|gb|AET04713.1| WD
           repeat-containing protein [Medicago truncatula]
          Length = 651

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 7/78 (8%)
 Frame = -1

Query: 282 GVSVAIPWCSKKLNQKGCA-----YTPWCYVQKQDHQDSTLCIRESEGFSLANWLFIDGS 118
           GV+VAIPWC  K +++GC      Y+P    + +   +    +R++E FSL NW FIDG+
Sbjct: 525 GVTVAIPWCGMKTDRRGCRINFSHYSP----EAKSKLEVASEVRDTERFSLGNWFFIDGT 580

Query: 117 YKHAA--TWPEDKLPVWN 70
            + +   TWPE+KLP W+
Sbjct: 581 CRGSTSMTWPEEKLPTWD 598


>ref|XP_003602569.1| WD repeat-containing protein, putative [Medicago truncatula]
           gi|355491617|gb|AES72820.1| WD repeat-containing
           protein, putative [Medicago truncatula]
          Length = 676

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 41/102 (40%), Positives = 56/102 (54%), Gaps = 8/102 (7%)
 Frame = -1

Query: 282 GVSVAIPWCSKKLNQKGCAYTPWC-YVQKQDHQDSTLCIRESEGFSLANWLFIDGSYKHA 106
           GV+VAIPW S    ++ C+ + +  Y  K   Q    C+RESE FS  +W  IDGS + +
Sbjct: 509 GVTVAIPW-SGMTAERSCSLSDFANYSSKTQRQ----CVRESERFSFGSWFSIDGSCRGS 563

Query: 105 ATWPEDKLPVWN------EAPPEQNYLSN-HHDISGYLPATW 1
            TWPE+KLP W+      E+  E+  L N  HD    +P TW
Sbjct: 564 MTWPEEKLPSWDSPLSEVESEDEELCLKNLCHD--NCVPETW 603


>ref|XP_004148673.1| PREDICTED: uncharacterized protein LOC101207772 [Cucumis sativus]
           gi|449507515|ref|XP_004163054.1| PREDICTED:
           uncharacterized LOC101207772 [Cucumis sativus]
          Length = 668

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = -1

Query: 282 GVSVAIPWCSKKLNQKGCAYTPWCYVQKQDHQDSTLCIRESEGFSLANWLFIDGSYKHAA 103
           GVSVAIPW          +     +  ++++Q +    RE++ FSL+NW   DG ++ +A
Sbjct: 536 GVSVAIPWSGVGTEPNCFSNNQALFSNRKNYQRAASWTRETDRFSLSNWFSADGLFRGSA 595

Query: 102 TWPEDKLPVWN-EAPPEQNYLSNHHD 28
           TWPE++LP+W+     ++N    HHD
Sbjct: 596 TWPEERLPLWDLPITEDENGSLQHHD 621


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