BLASTX nr result

ID: Bupleurum21_contig00020727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020727
         (934 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001119153.1| uncharacterized protein [Arabidopsis thalian...   117   5e-24
gb|ABK28677.1| unknown [Arabidopsis thaliana]                         117   5e-24
ref|NP_195811.2| uncharacterized protein [Arabidopsis thaliana] ...   117   5e-24
ref|XP_002323679.1| predicted protein [Populus trichocarpa] gi|2...   111   2e-22
ref|XP_002870893.1| hypothetical protein ARALYDRAFT_907956 [Arab...   110   6e-22

>ref|NP_001119153.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332003026|gb|AED90409.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 164

 Score =  117 bits (292), Expect = 5e-24
 Identities = 60/115 (52%), Positives = 83/115 (72%), Gaps = 5/115 (4%)
 Frame = -3

Query: 836 PPSDHIATKKKAIE-----IETETMIDASLAEELQAIRERLERMRLDKENTEKLLQDRQM 672
           P  D    K KA E     +  ET IDASLAEEL A +++LER+R D+E+TEKLL++R  
Sbjct: 18  PKEDAFFVKPKAAEKLKENLNLETSIDASLAEELSAFKKKLERLREDRESTEKLLKERDE 77

Query: 671 ALDMHMDRLLKRGQIQSLLEIEVDRLYRLNQIITSSTEVTPIRSLREKEQERKMK 507
           A+D+HM  LL+RG+ Q  LEI+VDRL+RL ++   S++++PIRSLR KEQ+ KM+
Sbjct: 78  AMDLHMSHLLQRGETQKSLEIQVDRLFRLKELHAYSSKISPIRSLRAKEQQEKMR 132


>gb|ABK28677.1| unknown [Arabidopsis thaliana]
          Length = 181

 Score =  117 bits (292), Expect = 5e-24
 Identities = 60/115 (52%), Positives = 83/115 (72%), Gaps = 5/115 (4%)
 Frame = -3

Query: 836 PPSDHIATKKKAIE-----IETETMIDASLAEELQAIRERLERMRLDKENTEKLLQDRQM 672
           P  D    K KA E     +  ET IDASLAEEL A +++LER+R D+E+TEKLL++R  
Sbjct: 18  PKEDAFFVKPKAAEKLKENLNLETSIDASLAEELSAFKKKLERLREDRESTEKLLKERDE 77

Query: 671 ALDMHMDRLLKRGQIQSLLEIEVDRLYRLNQIITSSTEVTPIRSLREKEQERKMK 507
           A+D+HM  LL+RG+ Q  LEI+VDRL+RL ++   S++++PIRSLR KEQ+ KM+
Sbjct: 78  AMDLHMSHLLQRGETQKSLEIQVDRLFRLKELHAYSSKISPIRSLRAKEQQEKMR 132


>ref|NP_195811.2| uncharacterized protein [Arabidopsis thaliana]
           gi|91806796|gb|ABE66125.1| hypothetical protein
           At5g01910 [Arabidopsis thaliana]
           gi|332003025|gb|AED90408.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 180

 Score =  117 bits (292), Expect = 5e-24
 Identities = 60/115 (52%), Positives = 83/115 (72%), Gaps = 5/115 (4%)
 Frame = -3

Query: 836 PPSDHIATKKKAIE-----IETETMIDASLAEELQAIRERLERMRLDKENTEKLLQDRQM 672
           P  D    K KA E     +  ET IDASLAEEL A +++LER+R D+E+TEKLL++R  
Sbjct: 18  PKEDAFFVKPKAAEKLKENLNLETSIDASLAEELSAFKKKLERLREDRESTEKLLKERDE 77

Query: 671 ALDMHMDRLLKRGQIQSLLEIEVDRLYRLNQIITSSTEVTPIRSLREKEQERKMK 507
           A+D+HM  LL+RG+ Q  LEI+VDRL+RL ++   S++++PIRSLR KEQ+ KM+
Sbjct: 78  AMDLHMSHLLQRGETQKSLEIQVDRLFRLKELHAYSSKISPIRSLRAKEQQEKMR 132


>ref|XP_002323679.1| predicted protein [Populus trichocarpa] gi|222868309|gb|EEF05440.1|
           predicted protein [Populus trichocarpa]
          Length = 205

 Score =  111 bits (278), Expect = 2e-22
 Identities = 62/117 (52%), Positives = 84/117 (71%)
 Frame = -3

Query: 854 SNKENLPPSDHIATKKKAIEIETETMIDASLAEELQAIRERLERMRLDKENTEKLLQDRQ 675
           SNKEN P   +  T  K I +E    +D+SLAEEL AI+++LER+R DKE TEK+L++R 
Sbjct: 54  SNKENHPI--YTTTPTKPI-VEP---LDSSLAEELSAIKKKLERLRSDKERTEKMLEERA 107

Query: 674 MALDMHMDRLLKRGQIQSLLEIEVDRLYRLNQIITSSTEVTPIRSLREKEQERKMKE 504
           M LD+    L +RG++Q  LEIEVDRLYRL ++ + S  ++PIR+LREKE E+KM E
Sbjct: 108 MVLDLQKKELEQRGEVQKRLEIEVDRLYRLKELHSYSMRISPIRTLREKEHEKKMSE 164


>ref|XP_002870893.1| hypothetical protein ARALYDRAFT_907956 [Arabidopsis lyrata subsp.
           lyrata] gi|297316730|gb|EFH47152.1| hypothetical protein
           ARALYDRAFT_907956 [Arabidopsis lyrata subsp. lyrata]
          Length = 189

 Score =  110 bits (274), Expect = 6e-22
 Identities = 57/107 (53%), Positives = 78/107 (72%)
 Frame = -3

Query: 836 PPSDHIATKKKAIEIETETMIDASLAEELQAIRERLERMRLDKENTEKLLQDRQMALDMH 657
           P  D    K KA E++ E +IDASLAEEL A +++LER R D+E TEKLL++R  A+D+ 
Sbjct: 18  PKEDAFVVKAKAAELK-ENLIDASLAEELSAFKKKLERQREDRERTEKLLKERDGAMDVQ 76

Query: 656 MDRLLKRGQIQSLLEIEVDRLYRLNQIITSSTEVTPIRSLREKEQER 516
           M  LL+RG+ Q  LEI+VDRL+RL ++   S++++PIRSLR KE ER
Sbjct: 77  MSLLLQRGETQKSLEIQVDRLFRLKELHAYSSKISPIRSLRAKEHER 123


Top