BLASTX nr result

ID: Bupleurum21_contig00020694 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020694
         (586 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002447718.1| hypothetical protein SORBIDRAFT_06g014390 [S...    58   1e-06
ref|XP_002450607.1| hypothetical protein SORBIDRAFT_05g008110 [S...    58   1e-06
ref|XP_002456416.1| hypothetical protein SORBIDRAFT_03g035940 [S...    57   2e-06
ref|XP_003626920.1| GRF zinc finger containing protein [Medicago...    57   2e-06
ref|XP_003595157.1| GRF zinc finger containing protein [Medicago...    57   3e-06

>ref|XP_002447718.1| hypothetical protein SORBIDRAFT_06g014390 [Sorghum bicolor]
           gi|241938901|gb|EES12046.1| hypothetical protein
           SORBIDRAFT_06g014390 [Sorghum bicolor]
          Length = 159

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 25/60 (41%), Positives = 37/60 (61%)
 Frame = +2

Query: 137 CRCGLKVKMRTSWTTKNPGRRFICCSQSKVNGGCQFFEWVDDDNQGRAKDVMSELTMKLK 316
           C CG+KV    SW+  NPG RF  C++++  GGC+FF WVD+   G  K ++ +L   +K
Sbjct: 43  CNCGVKVAQFISWSDMNPGMRFQKCARAR-EGGCEFFRWVDEPTLGFMKQLLLDLRDAVK 101


>ref|XP_002450607.1| hypothetical protein SORBIDRAFT_05g008110 [Sorghum bicolor]
           gi|241936450|gb|EES09595.1| hypothetical protein
           SORBIDRAFT_05g008110 [Sorghum bicolor]
          Length = 202

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 27/82 (32%), Positives = 44/82 (53%)
 Frame = +2

Query: 137 CRCGLKVKMRTSWTTKNPGRRFICCSQSKVNGGCQFFEWVDDDNQGRAKDVMSELTMKLK 316
           C+CG+K     SW+  NPG RF  C+ ++  GGC F+ WVD+   G  K ++ +L   +K
Sbjct: 43  CKCGVKAAQFISWSDLNPGMRFQKCAHAR-EGGCDFYRWVDEPTMGFMKQLLLDLRDAVK 101

Query: 317 NVEENLQVAKDRIGKLELKNRK 382
            ++      +   G+LE   R+
Sbjct: 102 ALDAATMENQRLQGQLEAAGRE 123


>ref|XP_002456416.1| hypothetical protein SORBIDRAFT_03g035940 [Sorghum bicolor]
           gi|241928391|gb|EES01536.1| hypothetical protein
           SORBIDRAFT_03g035940 [Sorghum bicolor]
          Length = 186

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 27/93 (29%), Positives = 49/93 (52%)
 Frame = +2

Query: 107 GVMGRIDGIVCRCGLKVKMRTSWTTKNPGRRFICCSQSKVNGGCQFFEWVDDDNQGRAKD 286
           G +     ++C+CG K     SW++ NPG R+  C++++  GGC FF WVD    G  K 
Sbjct: 12  GALEYSPAVLCKCGAKAAQFISWSSTNPGLRYRKCARARA-GGCDFFSWVDPPTGGFMKQ 70

Query: 287 VMSELTMKLKNVEENLQVAKDRIGKLELKNRKI 385
           ++ +L   +K       VA+ R+    +++ ++
Sbjct: 71  LLLDLHDAVKYWCGETAVAESRLEDARVESARV 103


>ref|XP_003626920.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355520942|gb|AET01396.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 116

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/66 (39%), Positives = 35/66 (53%)
 Frame = +2

Query: 113 MGRIDGIVCRCGLKVKMRTSWTTKNPGRRFICCSQSKVNGGCQFFEWVDDDNQGRAKDVM 292
           +  I  +VC CG+   + TSWT +NPGRRF  C +  V   C FF W D +   R K ++
Sbjct: 14  LNHITKLVCYCGVDSPLVTSWTDENPGRRFHGCGRYFVGRKCNFFRWYDPEVPDRQKKII 73

Query: 293 SELTMK 310
             L  K
Sbjct: 74  RALLRK 79


>ref|XP_003595157.1| GRF zinc finger containing protein [Medicago truncatula]
           gi|355484205|gb|AES65408.1| GRF zinc finger containing
           protein [Medicago truncatula]
          Length = 106

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 25/60 (41%), Positives = 33/60 (55%)
 Frame = +2

Query: 131 IVCRCGLKVKMRTSWTTKNPGRRFICCSQSKVNGGCQFFEWVDDDNQGRAKDVMSELTMK 310
           +VC CG+   + TSWT +NPGRRF  C +  V   C FF W D +   R K ++  L  K
Sbjct: 20  LVCYCGVDSPLVTSWTDENPGRRFHGCGRDFVGRKCNFFRWYDPEVPDRQKKIIRALLRK 79


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