BLASTX nr result

ID: Bupleurum21_contig00020692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020692
         (297 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI33346.3| unnamed protein product [Vitis vinifera]              163   1e-38
ref|XP_002285639.1| PREDICTED: probable pectate lyase 15 [Vitis ...   163   1e-38
emb|CAN78491.1| hypothetical protein VITISV_004934 [Vitis vinifera]   163   1e-38
emb|CAB36835.1| putative pectate lyase A11 (fragment) [Arabidops...   163   2e-38
ref|NP_001190720.1| pectate lyase [Arabidopsis thaliana] gi|3326...   163   2e-38

>emb|CBI33346.3| unnamed protein product [Vitis vinifera]
          Length = 430

 Score =  163 bits (413), Expect = 1e-38
 Identities = 76/98 (77%), Positives = 80/98 (81%)
 Frame = -3

Query: 295 FFSCGTGNPIDDCWRCDRNWQKNRKRLADCAIGFGRSAIGGRDGKYYXXXXXXXXXXXXX 116
           +FSCGTGNPIDDCWRCD NWQKNRKRLADC IGFGR+AIGGRDG++Y             
Sbjct: 75  YFSCGTGNPIDDCWRCDHNWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPGDDDPVNP 134

Query: 115 XPGTLRHAVIQDEPLWIVFKRSMVITLKQELIMNSFKT 2
            PGTLRHAVIQD PLWIVFKR MVITLKQELIMNSFKT
Sbjct: 135 KPGTLRHAVIQDAPLWIVFKRDMVITLKQELIMNSFKT 172


>ref|XP_002285639.1| PREDICTED: probable pectate lyase 15 [Vitis vinifera]
          Length = 432

 Score =  163 bits (413), Expect = 1e-38
 Identities = 76/98 (77%), Positives = 80/98 (81%)
 Frame = -3

Query: 295 FFSCGTGNPIDDCWRCDRNWQKNRKRLADCAIGFGRSAIGGRDGKYYXXXXXXXXXXXXX 116
           +FSCGTGNPIDDCWRCD NWQKNRKRLADC IGFGR+AIGGRDG++Y             
Sbjct: 77  YFSCGTGNPIDDCWRCDHNWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPGDDDPVNP 136

Query: 115 XPGTLRHAVIQDEPLWIVFKRSMVITLKQELIMNSFKT 2
            PGTLRHAVIQD PLWIVFKR MVITLKQELIMNSFKT
Sbjct: 137 KPGTLRHAVIQDAPLWIVFKRDMVITLKQELIMNSFKT 174


>emb|CAN78491.1| hypothetical protein VITISV_004934 [Vitis vinifera]
          Length = 418

 Score =  163 bits (413), Expect = 1e-38
 Identities = 76/98 (77%), Positives = 80/98 (81%)
 Frame = -3

Query: 295 FFSCGTGNPIDDCWRCDRNWQKNRKRLADCAIGFGRSAIGGRDGKYYXXXXXXXXXXXXX 116
           +FSCGTGNPIDDCWRCD NWQKNRKRLADC IGFGR+AIGGRDG++Y             
Sbjct: 75  YFSCGTGNPIDDCWRCDHNWQKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPGDDDPVNP 134

Query: 115 XPGTLRHAVIQDEPLWIVFKRSMVITLKQELIMNSFKT 2
            PGTLRHAVIQD PLWIVFKR MVITLKQELIMNSFKT
Sbjct: 135 KPGTLRHAVIQDAPLWIVFKRDMVITLKQELIMNSFKT 172


>emb|CAB36835.1| putative pectate lyase A11 (fragment) [Arabidopsis thaliana]
           gi|7268075|emb|CAB78413.1| putative pectate lyase A11
           (fragment) [Arabidopsis thaliana]
          Length = 374

 Score =  163 bits (412), Expect = 2e-38
 Identities = 76/98 (77%), Positives = 80/98 (81%)
 Frame = -3

Query: 295 FFSCGTGNPIDDCWRCDRNWQKNRKRLADCAIGFGRSAIGGRDGKYYXXXXXXXXXXXXX 116
           FFSCGTGNPIDDCWRCDRNW KNRKRLADC IGFGR+AIGGRDG++Y             
Sbjct: 19  FFSCGTGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNP 78

Query: 115 XPGTLRHAVIQDEPLWIVFKRSMVITLKQELIMNSFKT 2
            PGTLRHAVIQ+EPLWIVFKR MVI LKQELIMNSFKT
Sbjct: 79  KPGTLRHAVIQEEPLWIVFKRDMVIELKQELIMNSFKT 116


>ref|NP_001190720.1| pectate lyase [Arabidopsis thaliana] gi|332657916|gb|AEE83316.1|
           pectate lyase [Arabidopsis thaliana]
          Length = 451

 Score =  163 bits (412), Expect = 2e-38
 Identities = 76/98 (77%), Positives = 80/98 (81%)
 Frame = -3

Query: 295 FFSCGTGNPIDDCWRCDRNWQKNRKRLADCAIGFGRSAIGGRDGKYYXXXXXXXXXXXXX 116
           FFSCGTGNPIDDCWRCDRNW KNRKRLADC IGFGR+AIGGRDG++Y             
Sbjct: 96  FFSCGTGNPIDDCWRCDRNWHKNRKRLADCGIGFGRNAIGGRDGRFYIVTDPTDEDVVNP 155

Query: 115 XPGTLRHAVIQDEPLWIVFKRSMVITLKQELIMNSFKT 2
            PGTLRHAVIQ+EPLWIVFKR MVI LKQELIMNSFKT
Sbjct: 156 KPGTLRHAVIQEEPLWIVFKRDMVIELKQELIMNSFKT 193


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