BLASTX nr result

ID: Bupleurum21_contig00020640 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020640
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI31242.3| unnamed protein product [Vitis vinifera]              171   4e-41
ref|XP_002277191.1| PREDICTED: uncharacterized protein LOC100250...   171   4e-41
ref|XP_002304362.1| predicted protein [Populus trichocarpa] gi|2...   167   8e-40
ref|XP_002519004.1| conserved hypothetical protein [Ricinus comm...   166   1e-39
ref|NP_564388.1| putative membrane protein [Arabidopsis thaliana...   165   3e-39

>emb|CBI31242.3| unnamed protein product [Vitis vinifera]
          Length = 450

 Score =  171 bits (434), Expect = 4e-41
 Identities = 81/102 (79%), Positives = 94/102 (92%)
 Frame = +2

Query: 5   LMNFFEPALLFIQRWLPLFYVPSLVVLPISIKDIPATSGIKICFIIVGGWLATLLVAGYT 184
           L+NFF+PALLFIQRWLPLFYVPSLVVLP+++KDIPA SG+KICFIIVGGWLA+L VAGYT
Sbjct: 90  LINFFQPALLFIQRWLPLFYVPSLVVLPLAVKDIPAASGLKICFIIVGGWLASLSVAGYT 149

Query: 185 AIAVRKMVKTEMIPAEPMSRPSLFSQTEVRVWSGIFLITFVA 310
           AIAVRK+VKTEMIPAEPM +PS F+  EV  W+GIFLI+FV+
Sbjct: 150 AIAVRKIVKTEMIPAEPMEKPSPFTSIEVWTWTGIFLISFVS 191


>ref|XP_002277191.1| PREDICTED: uncharacterized protein LOC100250226 [Vitis vinifera]
          Length = 434

 Score =  171 bits (434), Expect = 4e-41
 Identities = 81/102 (79%), Positives = 94/102 (92%)
 Frame = +2

Query: 5   LMNFFEPALLFIQRWLPLFYVPSLVVLPISIKDIPATSGIKICFIIVGGWLATLLVAGYT 184
           L+NFF+PALLFIQRWLPLFYVPSLVVLP+++KDIPA SG+KICFIIVGGWLA+L VAGYT
Sbjct: 74  LINFFQPALLFIQRWLPLFYVPSLVVLPLAVKDIPAASGLKICFIIVGGWLASLSVAGYT 133

Query: 185 AIAVRKMVKTEMIPAEPMSRPSLFSQTEVRVWSGIFLITFVA 310
           AIAVRK+VKTEMIPAEPM +PS F+  EV  W+GIFLI+FV+
Sbjct: 134 AIAVRKIVKTEMIPAEPMEKPSPFTSIEVWTWTGIFLISFVS 175


>ref|XP_002304362.1| predicted protein [Populus trichocarpa] gi|222841794|gb|EEE79341.1|
           predicted protein [Populus trichocarpa]
          Length = 404

 Score =  167 bits (423), Expect = 8e-40
 Identities = 78/101 (77%), Positives = 90/101 (89%)
 Frame = +2

Query: 5   LMNFFEPALLFIQRWLPLFYVPSLVVLPISIKDIPATSGIKICFIIVGGWLATLLVAGYT 184
           LMNFF+PALLFIQRWLPLFYVPSLVVLP+S+KDIPA SG+KICFI  GGWLA+L VAG+T
Sbjct: 44  LMNFFQPALLFIQRWLPLFYVPSLVVLPLSVKDIPAASGVKICFITAGGWLASLCVAGFT 103

Query: 185 AIAVRKMVKTEMIPAEPMSRPSLFSQTEVRVWSGIFLITFV 307
           AIAVRKMVKTEM  AEPM++PS FS  E+  WSG+FL++FV
Sbjct: 104 AIAVRKMVKTEMTDAEPMAKPSPFSPLEIWAWSGVFLVSFV 144


>ref|XP_002519004.1| conserved hypothetical protein [Ricinus communis]
           gi|223541991|gb|EEF43537.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 534

 Score =  166 bits (421), Expect = 1e-39
 Identities = 79/102 (77%), Positives = 90/102 (88%)
 Frame = +2

Query: 5   LMNFFEPALLFIQRWLPLFYVPSLVVLPISIKDIPATSGIKICFIIVGGWLATLLVAGYT 184
           LMNFFEPALLFIQRWLPLFYVPSLVVLP+S+KDIPA SGIKICFII GGWLA+L VAG+T
Sbjct: 174 LMNFFEPALLFIQRWLPLFYVPSLVVLPLSVKDIPAASGIKICFIIAGGWLASLCVAGFT 233

Query: 185 AIAVRKMVKTEMIPAEPMSRPSLFSQTEVRVWSGIFLITFVA 310
           AI+VRK+VKTEM  AEPM++PS FS  E+  W GIFL++F A
Sbjct: 234 AISVRKIVKTEMTDAEPMAKPSPFSPIEIWTWCGIFLVSFAA 275


>ref|NP_564388.1| putative membrane protein [Arabidopsis thaliana]
           gi|10801363|gb|AAG23435.1|AC084165_1 unknown protein
           [Arabidopsis thaliana]
           gi|12321470|gb|AAG50795.1|AC074309_12 unknown protein
           [Arabidopsis thaliana] gi|14532512|gb|AAK63984.1|
           At1g32080/F3C3_12 [Arabidopsis thaliana]
           gi|20855884|gb|AAM26636.1| At1g32080/F3C3_12
           [Arabidopsis thaliana] gi|332193313|gb|AEE31434.1|
           putative membrane protein [Arabidopsis thaliana]
          Length = 512

 Score =  165 bits (418), Expect = 3e-39
 Identities = 77/101 (76%), Positives = 90/101 (89%)
 Frame = +2

Query: 5   LMNFFEPALLFIQRWLPLFYVPSLVVLPISIKDIPATSGIKICFIIVGGWLATLLVAGYT 184
           LMNFFEPA LFIQRWLPLFYVPSLVVLP+S++DIPA SG+KIC+I+ GGWLA+L VAGYT
Sbjct: 152 LMNFFEPAFLFIQRWLPLFYVPSLVVLPLSVRDIPAASGVKICYIVAGGWLASLCVAGYT 211

Query: 185 AIAVRKMVKTEMIPAEPMSRPSLFSQTEVRVWSGIFLITFV 307
           AIAVRKMVKTEM  AEPM++PS FS  E+  WSGIF+++FV
Sbjct: 212 AIAVRKMVKTEMTEAEPMAKPSPFSTLELWSWSGIFVVSFV 252


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