BLASTX nr result

ID: Bupleurum21_contig00020635 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020635
         (436 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298344.1| predicted protein [Populus trichocarpa] gi|2...   188   4e-46
ref|XP_002520538.1| zinc finger protein, putative [Ricinus commu...   187   6e-46
emb|CBI16098.3| unnamed protein product [Vitis vinifera]              186   2e-45
ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   186   2e-45
ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   186   2e-45

>ref|XP_002298344.1| predicted protein [Populus trichocarpa] gi|222845602|gb|EEE83149.1|
           predicted protein [Populus trichocarpa]
          Length = 365

 Score =  188 bits (477), Expect = 4e-46
 Identities = 87/129 (67%), Positives = 105/129 (81%)
 Frame = +3

Query: 9   GSGFELYYNDGDGSGLRPLPSGMSVSLLRTGFDRLLDRLSQIEANALGRIDHDHPASKAA 188
           GS +E YY+DG GSGLRP+P  MS  L+ +GFDRLLD+LSQIE N+LGR   + PASKA 
Sbjct: 99  GSAYEFYYDDGTGSGLRPVPETMSEFLMVSGFDRLLDQLSQIEINSLGRSAPNPPASKAV 158

Query: 189 IESMPAVEIVDDHVSSEYSCAVCTEQFEFGTEAREMPCKHLYHSDCIVPWLYIRNSCPVC 368
           +ESMP+VEI + HV SE  CAVC E FE G EAREMPCKH+YHSDCI+PWL +RNSCPVC
Sbjct: 159 VESMPSVEINETHVVSETYCAVCKEAFEIGDEAREMPCKHIYHSDCILPWLAMRNSCPVC 218

Query: 369 RYELPIESS 395
           R+ELP+++S
Sbjct: 219 RHELPVDNS 227


>ref|XP_002520538.1| zinc finger protein, putative [Ricinus communis]
           gi|223540380|gb|EEF41951.1| zinc finger protein,
           putative [Ricinus communis]
          Length = 318

 Score =  187 bits (476), Expect = 6e-46
 Identities = 86/140 (61%), Positives = 110/140 (78%), Gaps = 2/140 (1%)
 Frame = +3

Query: 3   GSGSGFELYYNDGDGSGLRPLPSGMSVSLLRTGFDRLLDRLSQIEANALGRIDHDHPASK 182
           G+ S +E YY+DG GSGLRP+P+ MS  L+ +GFDRLL++L+QIE N  GR+ +  PASK
Sbjct: 119 GNNSSYEFYYDDGSGSGLRPVPASMSEFLMGSGFDRLLEQLAQIEVNGFGRVGNP-PASK 177

Query: 183 AAIESMPAVEIVDDHVSSEYSCAVCTEQFEFGTEAREMPCKHLYHSDCIVPWLYIRNSCP 362
           A +ESMP V++ D HV++E  CAVC E FE G+EAREMPCKH+YHSDCI+PWL +RNSCP
Sbjct: 178 AVVESMPIVDVTDAHVAAEAHCAVCKEAFELGSEAREMPCKHIYHSDCILPWLALRNSCP 237

Query: 363 VCRYELP--IESSQVVNNSN 416
           VCR+E+P  +ESS    NSN
Sbjct: 238 VCRFEMPTDVESSDNSGNSN 257


>emb|CBI16098.3| unnamed protein product [Vitis vinifera]
          Length = 538

 Score =  186 bits (472), Expect = 2e-45
 Identities = 86/128 (67%), Positives = 104/128 (81%)
 Frame = +3

Query: 6   SGSGFELYYNDGDGSGLRPLPSGMSVSLLRTGFDRLLDRLSQIEANALGRIDHDHPASKA 185
           S S FELYY+DG GSGLRPLP+ MS  L+ +GFDRLL++LSQIE N  GR +H  PASKA
Sbjct: 225 SPSSFELYYDDGAGSGLRPLPATMSEFLMGSGFDRLLEQLSQIEINGFGRGEHP-PASKA 283

Query: 186 AIESMPAVEIVDDHVSSEYSCAVCTEQFEFGTEAREMPCKHLYHSDCIVPWLYIRNSCPV 365
           A+ESMP +EIV  H+ +E  CAVC E F+ G+EAREMPCKH+YHSDCI+PWL +RNSCPV
Sbjct: 284 AVESMPTIEIVSSHIVTELHCAVCKEAFQLGSEAREMPCKHIYHSDCILPWLSLRNSCPV 343

Query: 366 CRYELPIE 389
           CR+ELP +
Sbjct: 344 CRHELPTD 351


>ref|XP_004161919.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 380

 Score =  186 bits (471), Expect = 2e-45
 Identities = 87/142 (61%), Positives = 110/142 (77%)
 Frame = +3

Query: 3   GSGSGFELYYNDGDGSGLRPLPSGMSVSLLRTGFDRLLDRLSQIEANALGRIDHDHPASK 182
           G    FELYY+DG GSGLRPLP  MS  LL +GFDRLL++LSQIE N +GR ++  PASK
Sbjct: 105 GESRRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENP-PASK 163

Query: 183 AAIESMPAVEIVDDHVSSEYSCAVCTEQFEFGTEAREMPCKHLYHSDCIVPWLYIRNSCP 362
           AAIESMP ++I ++++++E  CAVC E FE GTEAREMPCKH+YH DCI+PWL IRNSCP
Sbjct: 164 AAIESMPTIQICENYLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCP 223

Query: 363 VCRYELPIESSQVVNNSNGIEN 428
           VCR+ELP ++   ++ +   EN
Sbjct: 224 VCRHELPSDNQNSLDAAESGEN 245


>ref|XP_004147682.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Cucumis sativus]
          Length = 383

 Score =  186 bits (471), Expect = 2e-45
 Identities = 87/142 (61%), Positives = 110/142 (77%)
 Frame = +3

Query: 3   GSGSGFELYYNDGDGSGLRPLPSGMSVSLLRTGFDRLLDRLSQIEANALGRIDHDHPASK 182
           G    FELYY+DG GSGLRPLP  MS  LL +GFDRLL++LSQIE N +GR ++  PASK
Sbjct: 108 GESRRFELYYDDGGGSGLRPLPPSMSEFLLGSGFDRLLEQLSQIEMNGIGRFENP-PASK 166

Query: 183 AAIESMPAVEIVDDHVSSEYSCAVCTEQFEFGTEAREMPCKHLYHSDCIVPWLYIRNSCP 362
           AAIESMP ++I ++++++E  CAVC E FE GTEAREMPCKH+YH DCI+PWL IRNSCP
Sbjct: 167 AAIESMPTIQICENYLATESHCAVCKEAFELGTEAREMPCKHIYHCDCILPWLSIRNSCP 226

Query: 363 VCRYELPIESSQVVNNSNGIEN 428
           VCR+ELP ++   ++ +   EN
Sbjct: 227 VCRHELPSDNQNSLDAAESGEN 248


Top