BLASTX nr result

ID: Bupleurum21_contig00020606 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020606
         (696 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26776.3| unnamed protein product [Vitis vinifera]              114   1e-23
emb|CAN68535.1| hypothetical protein VITISV_018797 [Vitis vinifera]   112   7e-23
ref|XP_002281684.1| PREDICTED: uncharacterized protein LOC100259...   107   3e-21
ref|XP_002521910.1| conserved hypothetical protein [Ricinus comm...   102   9e-20
ref|XP_002314756.1| predicted protein [Populus trichocarpa] gi|2...   100   5e-19

>emb|CBI26776.3| unnamed protein product [Vitis vinifera]
          Length = 160

 Score =  114 bits (286), Expect = 1e-23
 Identities = 70/158 (44%), Positives = 95/158 (60%), Gaps = 22/158 (13%)
 Frame = +3

Query: 66  MGFACQD--DLEKSNGI---------TPFRDGMIVTSGNETHDSEFWPIEHPTEPLDEDR 212
           MGF+C D  D +K             TP RDGM V S     + EFWPIEHP EP DEDR
Sbjct: 1   MGFSCGDGDDFDKKERQFLLIDETLDTPDRDGMDVRSHGVEGEVEFWPIEHPMEPSDEDR 60

Query: 213 PVKCPMLNSSVLN-NGRMPNEQFSENIKQRTE----KQSQRAIVPSAEAPTVRTLRKRHH 377
           PVKCPM +SSV+N +G +  +++SE++++R E       +     +AE P VR +RKRHH
Sbjct: 61  PVKCPMPDSSVINKDGGVHEDRYSESLRKRVEVAAMVNKEGKEEEAAEEPPVRAVRKRHH 120

Query: 378 TQTSTEDYTSSPFLRM------PSRDLTIFDMLQQFDK 473
           T T   D T++P LRM      P++++++F ML QFDK
Sbjct: 121 TLTQ-GDQTTTPLLRMPPLPRFPTQNVSMFQMLGQFDK 157


>emb|CAN68535.1| hypothetical protein VITISV_018797 [Vitis vinifera]
          Length = 171

 Score =  112 bits (280), Expect = 7e-23
 Identities = 63/132 (47%), Positives = 86/132 (65%), Gaps = 11/132 (8%)
 Frame = +3

Query: 111 TPFRDGMIVTSGNETHDSEFWPIEHPTEPLDEDRPVKCPMLNSSVLN-NGRMPNEQFSEN 287
           TP RDGM V S     + EFWPIEHP EP DEDRPVKCPM +SSV+N +G +  +++SE+
Sbjct: 38  TPDRDGMDVRSHGVEGEVEFWPIEHPMEPSDEDRPVKCPMPDSSVINKDGGVHEDRYSES 97

Query: 288 IKQRTE----KQSQRAIVPSAEAPTVRTLRKRHHTQTSTEDYTSSPFLRM------PSRD 437
           +++R E       +     +AE P VR +RKRHHT T   D T++P LRM      P+++
Sbjct: 98  LRKRVEVAAMVNKEGKEEEAAEEPPVRAVRKRHHTLTQ-GDQTTTPLLRMPPLPRFPTQN 156

Query: 438 LTIFDMLQQFDK 473
           +++F ML QFDK
Sbjct: 157 VSMFQMLGQFDK 168


>ref|XP_002281684.1| PREDICTED: uncharacterized protein LOC100259457 [Vitis vinifera]
          Length = 127

 Score =  107 bits (266), Expect = 3e-21
 Identities = 58/125 (46%), Positives = 81/125 (64%), Gaps = 10/125 (8%)
 Frame = +3

Query: 129 MIVTSGNETHDSEFWPIEHPTEPLDEDRPVKCPMLNSSVLNNGRMPNEQFSENIKQRTE- 305
           M V S     + EFWPIEHP EP DEDRPVKCPM +SSV+N+G +  +++SE++++R E 
Sbjct: 1   MDVRSHGVEGEVEFWPIEHPMEPSDEDRPVKCPMPDSSVINDGGVHEDRYSESLRKRVEV 60

Query: 306 ---KQSQRAIVPSAEAPTVRTLRKRHHTQTSTEDYTSSPFLRM------PSRDLTIFDML 458
                 +     +AE P VR +RKRHHT T   D T++P LRM      P++++++F ML
Sbjct: 61  AAMVNKEGKEEEAAEEPPVRAVRKRHHTLTQ-GDQTTTPLLRMPPLPRFPTQNVSMFQML 119

Query: 459 QQFDK 473
            QFDK
Sbjct: 120 GQFDK 124


>ref|XP_002521910.1| conserved hypothetical protein [Ricinus communis]
           gi|223538948|gb|EEF40546.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 168

 Score =  102 bits (253), Expect = 9e-20
 Identities = 51/115 (44%), Positives = 75/115 (65%), Gaps = 10/115 (8%)
 Frame = +3

Query: 159 DSEFWPIEHPTEPLDEDRPVKCPMLNSSVLNNGRMPNEQFSENIKQRTE----KQSQRAI 326
           D EFWP+EHP EP DEDRPVKCP+  SSV+N+GR+  E+++E++++R E       +  +
Sbjct: 52  DVEFWPVEHPMEPQDEDRPVKCPIPTSSVINDGRVREEKYTESLRKRAELPKIVNEEGIV 111

Query: 327 VPSAEAPTVRTLRKRHHTQTSTEDYTSSPFLRM------PSRDLTIFDMLQQFDK 473
           + +   P  + +RKRHHT T   D+  +P  RM      PS+++TIF MLQQ D+
Sbjct: 112 IVATGPPPFQAVRKRHHTLTH-GDHIITPLTRMPSLPPLPSQNVTIFHMLQQLDE 165


>ref|XP_002314756.1| predicted protein [Populus trichocarpa] gi|222863796|gb|EEF00927.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score = 99.8 bits (247), Expect = 5e-19
 Identities = 64/160 (40%), Positives = 86/160 (53%), Gaps = 24/160 (15%)
 Frame = +3

Query: 66  MGFAC-QDDLEKS----------NGITPFRDGMIVTSGNE---THDSEFWPIEHPTEPLD 203
           MG +C +DD EK+          +G T  R G +    +      D EFWP+EHP EP D
Sbjct: 1   MGLSCGEDDFEKNESHGVPLIIESGETRARGGYMDLQHHHHPVEFDVEFWPVEHPMEPQD 60

Query: 204 EDRPVKCPMLNSSVLNNGRMPNEQF---SENIKQRTEKQSQRAIVPSAEAPTVRTLRKRH 374
           EDRPVKCPM  SSV+ NGR   E     ++++        Q   V +AE P VR +RKRH
Sbjct: 61  EDRPVKCPMPTSSVIKNGRAHEESLEKRADDLPLPAVMNKQGIFVVAAE-PQVRAVRKRH 119

Query: 375 HTQTSTEDYTSSPFL-------RMPSRDLTIFDMLQQFDK 473
           HT T  +    +P L        +P++++TIF MLQ+FDK
Sbjct: 120 HTLTRPDHRVIAPNLARMASLPAIPTQNVTIFQMLQEFDK 159


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