BLASTX nr result

ID: Bupleurum21_contig00020584 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020584
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279886.1| PREDICTED: uncharacterized protein LOC100265...   232   1e-58
emb|CAN75263.1| hypothetical protein VITISV_005771 [Vitis vinifera]   232   1e-58
ref|XP_002317566.1| predicted protein [Populus trichocarpa] gi|2...   210   3e-52
ref|XP_002319804.1| predicted protein [Populus trichocarpa] gi|2...   204   3e-50
ref|XP_002522834.1| breast carcinoma amplified sequence, putativ...   197   2e-48

>ref|XP_002279886.1| PREDICTED: uncharacterized protein LOC100265881 [Vitis vinifera]
          Length = 922

 Score =  232 bits (591), Expect = 1e-58
 Identities = 113/196 (57%), Positives = 147/196 (75%), Gaps = 3/196 (1%)
 Frame = +1

Query: 1    CMIQYALRMSSGLDGVSGISGINTTYDQTHERDARLTVEAIQKWNICQKQNKRDRENNSD 180
            C+IQYALR+S+G+D  + +SG++T Y+ T + D RL VEA+QKWN+CQKQ++R+RE+N+D
Sbjct: 625  CVIQYALRISTGIDSTTVVSGLSTGYESTPDGDGRLVVEAVQKWNVCQKQHRREREDNTD 684

Query: 181  IYGENGNLDRSKIFPEDMSKEIVAFPEAKE--PKVKISSEERYHMYISEAELQMHLPEAP 354
            IYGENGN D SKIFPE + KE    PE +    K KIS EER+H+YISEAELQMH  + P
Sbjct: 685  IYGENGNTDSSKIFPEGIKKENAFHPETRSGVSKSKISPEERHHLYISEAELQMHQAQNP 744

Query: 355  LWARSEIYFQTMIKDDSVVGEDNALGGEIQIERIPARMLESRTKSLVPVFDYLKMPHFQM 534
            LWA+ EIYFQTM+ D     E+N LGGEI++ER P RM+E+R+K LVPVFDYL+ P FQ 
Sbjct: 745  LWAKPEIYFQTMMVDGL---EENVLGGEIEVERFPTRMIEARSKDLVPVFDYLQTPKFQK 801

Query: 535  SRTTSSENNY-GQPSH 579
            +R    ++N  G P H
Sbjct: 802  ARVPVLDSNINGHPLH 817


>emb|CAN75263.1| hypothetical protein VITISV_005771 [Vitis vinifera]
          Length = 893

 Score =  232 bits (591), Expect = 1e-58
 Identities = 113/196 (57%), Positives = 147/196 (75%), Gaps = 3/196 (1%)
 Frame = +1

Query: 1    CMIQYALRMSSGLDGVSGISGINTTYDQTHERDARLTVEAIQKWNICQKQNKRDRENNSD 180
            C+IQYALR+S+G+D  + +SG++T Y+ T + D RL VEA+QKWN+CQKQ++R+RE+N+D
Sbjct: 596  CVIQYALRISTGIDSTTVVSGLSTGYESTPDGDGRLVVEAVQKWNVCQKQHRREREDNTD 655

Query: 181  IYGENGNLDRSKIFPEDMSKEIVAFPEAKE--PKVKISSEERYHMYISEAELQMHLPEAP 354
            IYGENGN D SKIFPE + KE    PE +    K KIS EER+H+YISEAELQMH  + P
Sbjct: 656  IYGENGNTDSSKIFPEGIKKENAFHPETRSGVSKSKISPEERHHLYISEAELQMHQAQNP 715

Query: 355  LWARSEIYFQTMIKDDSVVGEDNALGGEIQIERIPARMLESRTKSLVPVFDYLKMPHFQM 534
            LWA+ EIYFQTM+ D     E+N LGGEI++ER P RM+E+R+K LVPVFDYL+ P FQ 
Sbjct: 716  LWAKPEIYFQTMMVDGL---EENVLGGEIEVERFPTRMIEARSKDLVPVFDYLQTPKFQK 772

Query: 535  SRTTSSENNY-GQPSH 579
            +R    ++N  G P H
Sbjct: 773  ARVPVLDSNINGHPLH 788


>ref|XP_002317566.1| predicted protein [Populus trichocarpa] gi|222860631|gb|EEE98178.1|
            predicted protein [Populus trichocarpa]
          Length = 702

 Score =  210 bits (535), Expect = 3e-52
 Identities = 102/174 (58%), Positives = 134/174 (77%), Gaps = 1/174 (0%)
 Frame = +1

Query: 4    MIQYALRMSSGLDGVSGISGINTTYDQTHERDARLTVEAIQKWNICQKQNKRDRENNSDI 183
            MIQYALR+S+G+D ++  SG+N TY+   E D RL VEA+QKWNICQKQN+RDRE+N+DI
Sbjct: 528  MIQYALRISAGVDSMAISSGLNATYESAAENDGRLVVEAMQKWNICQKQNRRDREDNADI 587

Query: 184  YGENGNLDRSKIFPEDMSKEIVAFPE-AKEPKVKISSEERYHMYISEAELQMHLPEAPLW 360
            YGENGN D +KI PE + K    +PE +     KISSEE++++YISEAEL MH P  PLW
Sbjct: 588  YGENGNSDSNKIHPEGIKKGNSIYPEDSAVTNAKISSEEKHYLYISEAELHMHQPRFPLW 647

Query: 361  ARSEIYFQTMIKDDSVVGEDNALGGEIQIERIPARMLESRTKSLVPVFDYLKMP 522
            A+ EIYFQ+M+ +   V + +AL GEI+IERIP RM+E+R+K LVP+FD+L+ P
Sbjct: 648  AKPEIYFQSMMTEGIKVDDADALQGEIEIERIPTRMIEARSKDLVPLFDHLQAP 701


>ref|XP_002319804.1| predicted protein [Populus trichocarpa] gi|222858180|gb|EEE95727.1|
            predicted protein [Populus trichocarpa]
          Length = 742

 Score =  204 bits (519), Expect = 3e-50
 Identities = 101/181 (55%), Positives = 130/181 (71%), Gaps = 2/181 (1%)
 Frame = +1

Query: 4    MIQYALRMSSGLDGVSGISGINTTYDQTHERDARLTVEAIQKWNICQKQNKRDRENNSDI 183
            MIQY LR+  G+D     SG+N  Y+   E + RL VEA+QKWNICQKQN+RDRE+N DI
Sbjct: 556  MIQYTLRILDGIDSTPVGSGLNVNYESAAENEGRLVVEAMQKWNICQKQNRRDREDNVDI 615

Query: 184  YGENGNLDRSKIFPEDMSKEIVAFPEAKEP--KVKISSEERYHMYISEAELQMHLPEAPL 357
            YG+NGN D +KI PE + K    +PE +      KIS EE++H+YISEAELQMH    PL
Sbjct: 616  YGDNGNSDSNKIHPEGIKKGNSIYPEVRGAVTNTKISPEEKHHLYISEAELQMHQACFPL 675

Query: 358  WARSEIYFQTMIKDDSVVGEDNALGGEIQIERIPARMLESRTKSLVPVFDYLKMPHFQMS 537
            WA+ EIYFQ+M+ +   V + +A+ GEI+IERIPARM+E+R+K LVP+FDYL+ P F  S
Sbjct: 676  WAKPEIYFQSMMTEGIDVNDADAMQGEIEIERIPARMIEARSKDLVPLFDYLQTPKFPHS 735

Query: 538  R 540
            R
Sbjct: 736  R 736


>ref|XP_002522834.1| breast carcinoma amplified sequence, putative [Ricinus communis]
            gi|223537918|gb|EEF39532.1| breast carcinoma amplified
            sequence, putative [Ricinus communis]
          Length = 891

 Score =  197 bits (502), Expect = 2e-48
 Identities = 99/197 (50%), Positives = 134/197 (68%), Gaps = 3/197 (1%)
 Frame = +1

Query: 1    CMIQYALRMSSGLDGVSGISGINTTYDQTHERDARLTVEAIQKWNICQKQNKRDRENNSD 180
            CMIQY LR+S+G+D ++ + G+ T ++   E D RL VEAIQKWNICQK N+R+RE+N D
Sbjct: 595  CMIQYVLRISAGIDSMAVVPGLGTAFESVPESDGRLVVEAIQKWNICQKLNRREREDNVD 654

Query: 181  IYGENGNLDRSKIFPEDMSKEIVAFPEAKEP--KVKISSEERYHMYISEAELQMHLPEAP 354
            IYGENG  D +KI+PE   K     PE      K KI+ EE++H+YISEAELQMH P   
Sbjct: 655  IYGENGISDSNKIYPEGKKKGNSVHPEGMGATIKEKINPEEKHHLYISEAELQMHQPHTA 714

Query: 355  LWARSEIYFQTMIKDDSVVGEDNALGGEIQIERIPARMLESRTKSLVPVFDYLKMPHFQM 534
            LWA+ EIYFQ M+ +   +  +NA+ GEI++ER+P R +E+R+K LVPVFDY      + 
Sbjct: 715  LWAKPEIYFQPMMTEGIKMDGENAMLGEIEVERLPTRTIEARSKDLVPVFDY-----HRY 769

Query: 535  SRTTSSENNYG-QPSHE 582
            +R  + +NN   QP H+
Sbjct: 770  ARVPALDNNINVQPQHQ 786


Top