BLASTX nr result

ID: Bupleurum21_contig00020581 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020581
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329241.1| predicted protein [Populus trichocarpa] gi|2...   144   7e-33
ref|XP_002329240.1| predicted protein [Populus trichocarpa] gi|2...   144   7e-33
ref|XP_004141596.1| PREDICTED: DNA-directed RNA polymerase 2, ch...   139   2e-31
emb|CAA69305.1| mitochondrial single-subunit DNA-dependent RNA p...   138   4e-31
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S...   138   5e-31

>ref|XP_002329241.1| predicted protein [Populus trichocarpa] gi|222870695|gb|EEF07826.1|
           predicted protein [Populus trichocarpa]
          Length = 543

 Score =  144 bits (363), Expect = 7e-33
 Identities = 67/73 (91%), Positives = 70/73 (95%)
 Frame = -1

Query: 481 FAGVHDSYWTHACDVDEMNKILREKFVELYERPILENLLESFEKSFPTLSFPPLPQRGEF 302
           FAGVHDSYWTHACDVDEMN+ILREKFVELYE PILENLLESFEKSFPTLSFPPLP RG+F
Sbjct: 471 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFEKSFPTLSFPPLPDRGDF 530

Query: 301 ELKEVLESLYFFN 263
           EL+EVLES YFFN
Sbjct: 531 ELREVLESPYFFN 543


>ref|XP_002329240.1| predicted protein [Populus trichocarpa] gi|222870694|gb|EEF07825.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score =  144 bits (363), Expect = 7e-33
 Identities = 67/73 (91%), Positives = 70/73 (95%)
 Frame = -1

Query: 481 FAGVHDSYWTHACDVDEMNKILREKFVELYERPILENLLESFEKSFPTLSFPPLPQRGEF 302
           FAGVHDSYWTHACDVDEMN+ILREKFVELYE PILENLLESFEKSFPTLSFPPLP RG+F
Sbjct: 456 FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFEKSFPTLSFPPLPDRGDF 515

Query: 301 ELKEVLESLYFFN 263
           EL+EVLES YFFN
Sbjct: 516 ELREVLESPYFFN 528


>ref|XP_004141596.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Cucumis sativus]
          Length = 984

 Score =  139 bits (350), Expect = 2e-31
 Identities = 64/73 (87%), Positives = 68/73 (93%)
 Frame = -1

Query: 481  FAGVHDSYWTHACDVDEMNKILREKFVELYERPILENLLESFEKSFPTLSFPPLPQRGEF 302
            FAGVHDSYWTHACDVDEMN+ILREKFVELYE PILENLLESFE+SFP L FPPLP+RGEF
Sbjct: 912  FAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFEQSFPALDFPPLPERGEF 971

Query: 301  ELKEVLESLYFFN 263
             LKEVL+S YFFN
Sbjct: 972  NLKEVLDSPYFFN 984


>emb|CAA69305.1| mitochondrial single-subunit DNA-dependent RNA polymerase
            [Chenopodium album]
          Length = 988

 Score =  138 bits (348), Expect = 4e-31
 Identities = 62/73 (84%), Positives = 71/73 (97%)
 Frame = -1

Query: 481  FAGVHDSYWTHACDVDEMNKILREKFVELYERPILENLLESFEKSFPTLSFPPLPQRGEF 302
            FAGVHDSYWTHACDVD+MN+ILREKFVELYE+PILENLLESF++SFPTL FPPLP+RG+F
Sbjct: 916  FAGVHDSYWTHACDVDKMNQILREKFVELYEQPILENLLESFQESFPTLQFPPLPERGDF 975

Query: 301  ELKEVLESLYFFN 263
            +L+EVLES YFFN
Sbjct: 976  DLREVLESPYFFN 988


>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
            gi|241924412|gb|EER97556.1| hypothetical protein
            SORBIDRAFT_02g039520 [Sorghum bicolor]
          Length = 976

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/73 (86%), Positives = 68/73 (93%)
 Frame = -1

Query: 481  FAGVHDSYWTHACDVDEMNKILREKFVELYERPILENLLESFEKSFPTLSFPPLPQRGEF 302
            FAGVHDSYWTHACDVD MNKILREKFVELY+ PILENLLESFEKSFP L FPPLP+RG+F
Sbjct: 904  FAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGDF 963

Query: 301  ELKEVLESLYFFN 263
            ++KEVLES YFFN
Sbjct: 964  DMKEVLESPYFFN 976


Top