BLASTX nr result

ID: Bupleurum21_contig00020579 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020579
         (788 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002311204.1| predicted protein [Populus trichocarpa] gi|2...   105   1e-20
gb|ABK92946.1| unknown [Populus trichocarpa]                          105   1e-20
ref|XP_002280187.1| PREDICTED: uncharacterized protein LOC100260...   101   2e-19
ref|XP_002526856.1| protein with unknown function [Ricinus commu...   100   3e-19
ref|XP_002279465.1| PREDICTED: uncharacterized protein LOC100266...    99   1e-18

>ref|XP_002311204.1| predicted protein [Populus trichocarpa] gi|222851024|gb|EEE88571.1|
           predicted protein [Populus trichocarpa]
          Length = 311

 Score =  105 bits (262), Expect = 1e-20
 Identities = 64/161 (39%), Positives = 89/161 (55%)
 Frame = +3

Query: 87  PLDLHVTIVSAKGLKNDMVRNGGKLKPYXXXXXXXXXXXXXXXXXXKLKPYVMVCSSDDS 266
           PLDL +TI+SAK LKN   + G                         LKPY +     D 
Sbjct: 11  PLDLDLTIISAKHLKNVNWKTGD------------------------LKPYAVFWV--DP 44

Query: 267 MRRFTTKSDDTGSTEPVWNEQFVIPLTFHYSQVSLDLAVCHSKEEELKEGRSPVAGFLHF 446
            RR +TKSD++GST PVWNE+F +PLTF      L L + HSK  E  +   P+ G L  
Sbjct: 45  SRRLSTKSDESGSTRPVWNERFTLPLTFALRDSFLTLEIFHSKPSETPK---PLVGTLRV 101

Query: 447 PIRDLVDPRDSTRIRSLQLRKNSDGQPRGEVLLKLSIQEAP 569
            ++DL DP DS R+R+L+L + S G+P+G++ +KL ++E P
Sbjct: 102 ALKDLSDPDDSNRVRTLELTRPS-GRPQGKIRIKLGVRERP 141


>gb|ABK92946.1| unknown [Populus trichocarpa]
          Length = 311

 Score =  105 bits (262), Expect = 1e-20
 Identities = 64/161 (39%), Positives = 89/161 (55%)
 Frame = +3

Query: 87  PLDLHVTIVSAKGLKNDMVRNGGKLKPYXXXXXXXXXXXXXXXXXXKLKPYVMVCSSDDS 266
           PLDL +TI+SAK LKN   + G                         LKPY +     D 
Sbjct: 11  PLDLDLTIISAKHLKNVNWKTGD------------------------LKPYAVFWV--DP 44

Query: 267 MRRFTTKSDDTGSTEPVWNEQFVIPLTFHYSQVSLDLAVCHSKEEELKEGRSPVAGFLHF 446
            RR +TKSD++GST PVWNE+F +PLTF      L L + HSK  E  +   P+ G L  
Sbjct: 45  SRRLSTKSDESGSTRPVWNERFTLPLTFALRDSFLTLEIFHSKPSETPK---PLVGTLRV 101

Query: 447 PIRDLVDPRDSTRIRSLQLRKNSDGQPRGEVLLKLSIQEAP 569
            ++DL DP DS R+R+L+L + S G+P+G++ +KL ++E P
Sbjct: 102 ALKDLSDPDDSNRVRTLELTRPS-GRPQGKIRIKLGVRERP 141


>ref|XP_002280187.1| PREDICTED: uncharacterized protein LOC100260337 [Vitis vinifera]
           gi|297745939|emb|CBI15995.3| unnamed protein product
           [Vitis vinifera]
          Length = 315

 Score =  101 bits (252), Expect = 2e-19
 Identities = 68/162 (41%), Positives = 86/162 (53%), Gaps = 1/162 (0%)
 Frame = +3

Query: 90  LDLHVTIVSAKGLKNDMVRNGGKLKPYXXXXXXXXXXXXXXXXXXKLKPYVMVCSSDDSM 269
           +DL VTIVSAK LKN   RNG                         LKPY +     D  
Sbjct: 18  MDLDVTIVSAKHLKNVNWRNGD------------------------LKPYAIFWV--DPE 51

Query: 270 RRFTTKSDDTGSTEPVWNEQFVIPLTFHYSQVSLDLAVCHSKEEELKEGRSPVAGFLHFP 449
           RRF TK DD GST PVWNE F IP+          L + HSK  E  +   P+ G L FP
Sbjct: 52  RRFATKPDDCGSTRPVWNEHFSIPINTPPYDSVFTLEIFHSKPSETPK---PLVGVLRFP 108

Query: 450 IRDLVDPRDSTR-IRSLQLRKNSDGQPRGEVLLKLSIQEAPP 572
           I+DLVD  +S   IR+L+LR+ S G+P G++ +KL+++E PP
Sbjct: 109 IKDLVDSDESANSIRTLELRRPS-GRPNGKIRIKLALRERPP 149


>ref|XP_002526856.1| protein with unknown function [Ricinus communis]
           gi|223533755|gb|EEF35487.1| protein with unknown
           function [Ricinus communis]
          Length = 312

 Score =  100 bits (250), Expect = 3e-19
 Identities = 63/162 (38%), Positives = 86/162 (53%)
 Frame = +3

Query: 84  RPLDLHVTIVSAKGLKNDMVRNGGKLKPYXXXXXXXXXXXXXXXXXXKLKPYVMVCSSDD 263
           +PLDL +TIVSAK LKN   +NG                         LK Y +     D
Sbjct: 10  KPLDLDLTIVSAKHLKNVNWKNGD------------------------LKAYAVFWVDPD 45

Query: 264 SMRRFTTKSDDTGSTEPVWNEQFVIPLTFHYSQVSLDLAVCHSKEEELKEGRSPVAGFLH 443
             RR  TKSDD+GST PVWNE+F +PL+         L + HSK  E  +   P+ G L 
Sbjct: 46  --RRLATKSDDSGSTRPVWNERFTLPLSLPLHDSYFTLEIFHSKPSETPK---PLVGTLR 100

Query: 444 FPIRDLVDPRDSTRIRSLQLRKNSDGQPRGEVLLKLSIQEAP 569
             ++DL DP DSTRIR+ +L + S G+P+G++ +K+  +E P
Sbjct: 101 VGLKDLFDPDDSTRIRTFELTRPS-GRPQGKIRIKIGFRERP 141


>ref|XP_002279465.1| PREDICTED: uncharacterized protein LOC100266706 [Vitis vinifera]
          Length = 267

 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 62/162 (38%), Positives = 89/162 (54%)
 Frame = +3

Query: 84  RPLDLHVTIVSAKGLKNDMVRNGGKLKPYXXXXXXXXXXXXXXXXXXKLKPYVMVCSSDD 263
           RPLD+ +T+VSAK L+N   ++G                        +LKPY +     D
Sbjct: 5   RPLDIDLTVVSAKHLQNVNWKHG------------------------ELKPYAIFWVDPD 40

Query: 264 SMRRFTTKSDDTGSTEPVWNEQFVIPLTFHYSQVSLDLAVCHSKEEELKEGRSPVAGFLH 443
             RR  TK D++GST PVWNE+F + +        L L V HSK  E  +   P+ G L 
Sbjct: 41  --RRLATKPDESGSTCPVWNERFTVSVNLPLHDSVLTLEVFHSKPSETPK---PLVGSLQ 95

Query: 444 FPIRDLVDPRDSTRIRSLQLRKNSDGQPRGEVLLKLSIQEAP 569
            P++DLVD  DS RI++ QLR+ S G+P+G++ +KL+I+E P
Sbjct: 96  VPLKDLVDSDDSNRIKTFQLRRPS-GRPQGKIRVKLAIRERP 136


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