BLASTX nr result

ID: Bupleurum21_contig00020568 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020568
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265425.2| PREDICTED: uncharacterized protein LOC100241...   152   7e-35
ref|XP_003612926.1| hypothetical protein MTR_5g030610 [Medicago ...   122   8e-26
ref|XP_002528906.1| conserved hypothetical protein [Ricinus comm...   122   8e-26
ref|XP_002528901.1| conserved hypothetical protein [Ricinus comm...   122   8e-26
ref|XP_002310315.1| predicted protein [Populus trichocarpa] gi|2...   121   1e-25

>ref|XP_002265425.2| PREDICTED: uncharacterized protein LOC100241361 [Vitis vinifera]
           gi|297735862|emb|CBI18616.3| unnamed protein product
           [Vitis vinifera]
          Length = 460

 Score =  152 bits (383), Expect = 7e-35
 Identities = 103/233 (44%), Positives = 139/233 (59%), Gaps = 14/233 (6%)
 Frame = -1

Query: 658 EARSVQLP-----PKSKELSGGNGKRVFIAREESRSVPSDRQMKPK-GAHNLSSASKPKI 497
           E+RSVQLP     PKSK      G++   +REE + V  + Q++ K G+  L SASKP +
Sbjct: 192 ESRSVQLPQKSIPPKSKPPLSNTGRQAPSSREERKPVSMNGQIQAKAGSQKLVSASKPNL 251

Query: 496 -SMDYRKQNGSNNGTGPGRPQLPRPQVSQPQMPKSLLPKTLNNSSEKRNISQSVKNSVPV 320
            S+D RKQ G+NNG GPGRP            PKSL  K   +S+EK+  +   ++S+  
Sbjct: 252 MSVDSRKQLGTNNGAGPGRPV----------GPKSLPSKMPVSSAEKKASAPGARSSMSS 301

Query: 319 MQKAHLSKSQQPTPKQTLDRRRELQESHKGIQTSKQSV--SKYQIKQPPTKDQPRVTLQH 146
           + KA  SK     P+Q LD++R+ Q+S+KG    KQ V  S+ QI +P  +     TL  
Sbjct: 302 LHKAPPSKLHPSIPRQNLDQKRQFQDSNKGKMMPKQRVDSSRPQINKPLKQMSSHSTLSD 361

Query: 145 DYQNKRP-RKYSDEE--DEGVEAISMIRKMFRYNPRKYA--NDDDDSDMEANF 2
               K+P R+YSD+E  DE  +AI+MIR+MF YNP KYA  +DDDDSDMEANF
Sbjct: 362 HRPKKKPVRRYSDDEDDDEDGKAINMIRRMFGYNPNKYAGRDDDDDSDMEANF 414


>ref|XP_003612926.1| hypothetical protein MTR_5g030610 [Medicago truncatula]
           gi|355514261|gb|AES95884.1| hypothetical protein
           MTR_5g030610 [Medicago truncatula]
          Length = 457

 Score =  122 bits (305), Expect = 8e-26
 Identities = 80/223 (35%), Positives = 123/223 (55%), Gaps = 6/223 (2%)
 Frame = -1

Query: 652 RSVQLPPKSKELSGGNGKRVFIAREESRSVPSDRQM--KPKGAHNLSSASKP-KISMDYR 482
           ++ Q+P KSK      GK V  + E  + V   R +  KP+  + LSS S+  K+S+D R
Sbjct: 200 QAAQVPGKSKPSLSNGGKLVRGSGENRKPVAGARHLAPKPRSNYKLSSTSQASKVSVDSR 259

Query: 481 KQNGSNNGTGPGRPQLPRPQVSQPQMPKSLLPKTLNNSSEKRNISQSVKNSVPVMQKAHL 302
           KQ G+N+  GPGRP LP+   S+  +          N+S  ++++  ++N +  +QK   
Sbjct: 260 KQLGNNSVNGPGRPLLPKGMPSKMHV----------NTSVSKSVTPGMRNPINGVQKPAP 309

Query: 301 SKSQQPTPKQTLDRRRELQESHKGIQTSKQSV--SKYQIKQPPTKDQPRVTLQHDYQNKR 128
           SK     PKQ +D+RR+++E +K     KQ V  SK Q+ +PP K  P+ +  HD + K 
Sbjct: 310 SKVPSSVPKQGVDQRRDVREQYKPRTVPKQPVSSSKTQVSKPPLKQIPKRSDLHDQRPKS 369

Query: 127 -PRKYSDEEDEGVEAISMIRKMFRYNPRKYANDDDDSDMEANF 2
             RK   +E    +    IR MF YNP+ Y++DDDD++MEA F
Sbjct: 370 IVRKRRPDEPVVDDWRREIRNMFGYNPKNYSDDDDDANMEAGF 412


>ref|XP_002528906.1| conserved hypothetical protein [Ricinus communis]
           gi|223531660|gb|EEF33486.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 449

 Score =  122 bits (305), Expect = 8e-26
 Identities = 80/225 (35%), Positives = 128/225 (56%), Gaps = 6/225 (2%)
 Frame = -1

Query: 658 EARSVQLPPKSKELSGGNGKRVFIAREESRSVPSDRQMKPK-GAHNLSSASKPK-ISMDY 485
           EAR  Q+P KS++ +G + + +   RE+ +S+P + Q   K G H  +S SKP   S+D 
Sbjct: 189 EARPAQVPQKSRQPAGNSVRDIHGGREDRKSIPMNGQFHSKSGLHRSTSTSKPSSTSLDP 248

Query: 484 RKQNGSNNGTGPGRPQLPRPQVSQPQMPKSLLPKTLNNSSEKRNISQSVKNSVPVMQKAH 305
           ++Q G N+G GPGRP            PK+L  KT  ++ E++  + + K+ +P  +K+ 
Sbjct: 249 KRQLGRNSGIGPGRPT----------GPKALPMKTPLSNVERKASAPAPKSIMPGARKSL 298

Query: 304 LSKSQQPTPKQTLDRRRELQESHKGIQTSKQSV--SKYQIKQPPTKDQPRVTLQHDYQNK 131
             K Q   P+Q +++R+ LQE  K +  SKQ V  S+ Q+ +P  +   + +LQ +   K
Sbjct: 299 PPKIQSYAPRQHVEQRKTLQEPKKTVPMSKQPVVSSRPQMNKPVKQISSKASLQDNRPKK 358

Query: 130 RP-RKYSDEEDEGVEAISMIRKMFRYNPRKYANDDDD-SDMEANF 2
           +P R + D++D+   A SM+RKM +       +DDDD SDMEANF
Sbjct: 359 KPARPFPDDDDDDAMAFSMLRKMLKPERWNAVDDDDDISDMEANF 403


>ref|XP_002528901.1| conserved hypothetical protein [Ricinus communis]
           gi|223531655|gb|EEF33481.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 432

 Score =  122 bits (305), Expect = 8e-26
 Identities = 80/225 (35%), Positives = 128/225 (56%), Gaps = 6/225 (2%)
 Frame = -1

Query: 658 EARSVQLPPKSKELSGGNGKRVFIAREESRSVPSDRQMKPK-GAHNLSSASKPK-ISMDY 485
           EAR  Q+P KS++ +G + + +   RE+ +S+P + Q   K G H  +S SKP   S+D 
Sbjct: 172 EARPAQVPQKSRQPAGNSVRDIHGGREDRKSIPMNGQFHSKSGLHRSTSTSKPSSTSLDP 231

Query: 484 RKQNGSNNGTGPGRPQLPRPQVSQPQMPKSLLPKTLNNSSEKRNISQSVKNSVPVMQKAH 305
           ++Q G N+G GPGRP            PK+L  KT  ++ E++  + + K+ +P  +K+ 
Sbjct: 232 KRQLGRNSGIGPGRPT----------GPKALPMKTPLSNVERKASAPAPKSIMPGARKSL 281

Query: 304 LSKSQQPTPKQTLDRRRELQESHKGIQTSKQSV--SKYQIKQPPTKDQPRVTLQHDYQNK 131
             K Q   P+Q +++R+ LQE  K +  SKQ V  S+ Q+ +P  +   + +LQ +   K
Sbjct: 282 PPKIQSYAPRQHVEQRKTLQEPKKTVPMSKQPVVSSRPQMNKPVKQISSKASLQDNRPKK 341

Query: 130 RP-RKYSDEEDEGVEAISMIRKMFRYNPRKYANDDDD-SDMEANF 2
           +P R + D++D+   A SM+RKM +       +DDDD SDMEANF
Sbjct: 342 KPARPFPDDDDDDAMAFSMLRKMLKPERWNAVDDDDDISDMEANF 386


>ref|XP_002310315.1| predicted protein [Populus trichocarpa] gi|222853218|gb|EEE90765.1|
           predicted protein [Populus trichocarpa]
          Length = 447

 Score =  121 bits (303), Expect = 1e-25
 Identities = 89/227 (39%), Positives = 125/227 (55%), Gaps = 8/227 (3%)
 Frame = -1

Query: 658 EARSVQLPPKSKELSGGNGKRVFIAREESRSVPSDRQMKPK-GAHNLSSASKP-KISMDY 485
           EARS Q+P K K+ S  +G+ +   REE + V  + QM  K G+   +SA+KP   S++ 
Sbjct: 185 EARSAQVPQKIKQASSNSGRNIHGIREERKPVFRNGQMHSKVGSQKPTSANKPDATSINS 244

Query: 484 RKQNGSNNGTGPGRPQLPRPQVSQPQMPKSLLPKTLNNS-SEKRNISQSVKNSVPVMQKA 308
           ++Q GSNNGTGPGR          P  PK L  KT  +S  +K+  S S K  +P M K+
Sbjct: 245 KRQLGSNNGTGPGR----------PAGPKFLPSKTPASSIMQKKASSPSAKKILPAMHKS 294

Query: 307 HLSK-SQQPTPKQTLDRRRELQESHKGIQTSKQSVS--KYQIKQPPTKDQPRVTLQHDYQ 137
             S  S+   PKQ  ++R+ LQE +K     KQ +S  K QI +P  +     +LQ +  
Sbjct: 295 LPSNPSKSSVPKQHWEQRKGLQEPNKARPIPKQPLSSLKSQINKPIKQVSSHASLQDNRP 354

Query: 136 NKRP-RKYSDEEDEGVEAISMIRKMF-RYNPRKYANDDDDSDMEANF 2
            K+P R + D   +  +A SM+RK+    N   Y +DDDDSDMEANF
Sbjct: 355 KKKPVRPFPDAGSDDEDAFSMLRKLIGNKNRGNYDDDDDDSDMEANF 401


Top