BLASTX nr result

ID: Bupleurum21_contig00020541 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020541
         (787 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002297769.1| predicted protein [Populus trichocarpa] gi|2...   170   4e-40
gb|AFK43567.1| unknown [Lotus japonicus]                              169   8e-40
ref|XP_002525451.1| conserved hypothetical protein [Ricinus comm...   169   8e-40
ref|XP_003606116.1| hypothetical protein MTR_4g053290 [Medicago ...   164   3e-38
ref|NP_001042664.1| Os01g0264500 [Oryza sativa Japonica Group] g...   160   2e-37

>ref|XP_002297769.1| predicted protein [Populus trichocarpa] gi|222845027|gb|EEE82574.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score =  170 bits (430), Expect = 4e-40
 Identities = 85/131 (64%), Positives = 95/131 (72%), Gaps = 1/131 (0%)
 Frame = +2

Query: 101 TNPRNCDTCHHCAGPLSKDMETSNWTVAPLIRDSFSMIGSAVGGTASAFYGFNHVMPLVR 280
           +NP++   CHHCAGPL+K+METS WTV PLIRDSFSMIGSAVGGT SAFYGFNHVMP+VR
Sbjct: 6   SNPQSSLRCHHCAGPLTKEMETSQWTVRPLIRDSFSMIGSAVGGTTSAFYGFNHVMPVVR 65

Query: 281 RYVKGPMWLHFLVGAPPVIVXXXXXXXXXXXXVPALAQLXXXXXXXXXXXXXLPP-AQDT 457
           R+VKGPMWLHF +GAPPVIV            VPALAQL             LPP +QD 
Sbjct: 66  RWVKGPMWLHFFIGAPPVIVFSSACAGLAGGAVPALAQLASSSYHAAFSSPSLPPSSQDD 125

Query: 458 KMNKSRSSSTL 490
           K  KSR+SSTL
Sbjct: 126 KRQKSRNSSTL 136


>gb|AFK43567.1| unknown [Lotus japonicus]
          Length = 133

 Score =  169 bits (427), Expect = 8e-40
 Identities = 83/130 (63%), Positives = 96/130 (73%)
 Frame = +2

Query: 101 TNPRNCDTCHHCAGPLSKDMETSNWTVAPLIRDSFSMIGSAVGGTASAFYGFNHVMPLVR 280
           ++ +N   CHHCAGPLSK+METS+WT+APL+RDSFSMIGSAVGGT SAFYGFNHVMP+VR
Sbjct: 7   SSSKNDLRCHHCAGPLSKEMETSDWTIAPLVRDSFSMIGSAVGGTTSAFYGFNHVMPVVR 66

Query: 281 RYVKGPMWLHFLVGAPPVIVXXXXXXXXXXXXVPALAQLXXXXXXXXXXXXXLPPAQDTK 460
           RYVKGPMWLHFL+G PPVIV            VPALAQL              PP++D K
Sbjct: 67  RYVKGPMWLHFLIGTPPVIVFSSACAGLAGGAVPALAQLVSSSYHATLSS---PPSKDDK 123

Query: 461 MNKSRSSSTL 490
           + KSR+SSTL
Sbjct: 124 IQKSRTSSTL 133


>ref|XP_002525451.1| conserved hypothetical protein [Ricinus communis]
           gi|223535264|gb|EEF36941.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 141

 Score =  169 bits (427), Expect = 8e-40
 Identities = 81/122 (66%), Positives = 92/122 (75%)
 Frame = +2

Query: 125 CHHCAGPLSKDMETSNWTVAPLIRDSFSMIGSAVGGTASAFYGFNHVMPLVRRYVKGPMW 304
           C+HCAGPLSK+METS WTV PLIRDSFSMIGSAVGGTASAFYGFNHVMP+VR++VKGPMW
Sbjct: 20  CYHCAGPLSKEMETSEWTVPPLIRDSFSMIGSAVGGTASAFYGFNHVMPVVRKWVKGPMW 79

Query: 305 LHFLVGAPPVIVXXXXXXXXXXXXVPALAQLXXXXXXXXXXXXXLPPAQDTKMNKSRSSS 484
           LHF +GAPPVIV            +PA+AQL             LPP++D KM+ SRSSS
Sbjct: 80  LHFFIGAPPVIVFSSACAGLVGGAIPAVAQLASSSYHAAVSSPSLPPSKDQKMHSSRSSS 139

Query: 485 TL 490
           TL
Sbjct: 140 TL 141


>ref|XP_003606116.1| hypothetical protein MTR_4g053290 [Medicago truncatula]
           gi|355507171|gb|AES88313.1| hypothetical protein
           MTR_4g053290 [Medicago truncatula]
          Length = 127

 Score =  164 bits (414), Expect = 3e-38
 Identities = 81/122 (66%), Positives = 88/122 (72%)
 Frame = +2

Query: 125 CHHCAGPLSKDMETSNWTVAPLIRDSFSMIGSAVGGTASAFYGFNHVMPLVRRYVKGPMW 304
           CHHCAGPLSK+METS W +APLIRDSFSMIGSAVGGT SAFYGFNHVMP+V RYVKGPMW
Sbjct: 9   CHHCAGPLSKEMETSKWNIAPLIRDSFSMIGSAVGGTTSAFYGFNHVMPIVHRYVKGPMW 68

Query: 305 LHFLVGAPPVIVXXXXXXXXXXXXVPALAQLXXXXXXXXXXXXXLPPAQDTKMNKSRSSS 484
           +HFLVG PPVIV            VPALAQL              PP+ D K+ KSR+SS
Sbjct: 69  VHFLVGTPPVIVFSSVCAGLAGGAVPALAQLVSSTYHAAQSS---PPSDDEKIQKSRTSS 125

Query: 485 TL 490
           TL
Sbjct: 126 TL 127


>ref|NP_001042664.1| Os01g0264500 [Oryza sativa Japonica Group]
           gi|6815055|dbj|BAA90342.1| unknown protein [Oryza sativa
           Japonica Group] gi|7242916|dbj|BAA92514.1| unknown
           protein [Oryza sativa Japonica Group]
           gi|113532195|dbj|BAF04578.1| Os01g0264500 [Oryza sativa
           Japonica Group] gi|215692929|dbj|BAG88349.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218187934|gb|EEC70361.1| hypothetical protein
           OsI_01289 [Oryza sativa Indica Group]
           gi|222618156|gb|EEE54288.1| hypothetical protein
           OsJ_01207 [Oryza sativa Japonica Group]
          Length = 138

 Score =  160 bits (406), Expect = 2e-37
 Identities = 77/122 (63%), Positives = 86/122 (70%)
 Frame = +2

Query: 125 CHHCAGPLSKDMETSNWTVAPLIRDSFSMIGSAVGGTASAFYGFNHVMPLVRRYVKGPMW 304
           CHHCAGPLSKDMETS+WTV PL+RDSFSMIGSA+GGTA AFYGFNH MP VRRY+KGPMW
Sbjct: 17  CHHCAGPLSKDMETSSWTVPPLVRDSFSMIGSAIGGTAGAFYGFNHTMPFVRRYIKGPMW 76

Query: 305 LHFLVGAPPVIVXXXXXXXXXXXXVPALAQLXXXXXXXXXXXXXLPPAQDTKMNKSRSSS 484
           +HFLVGAPPVIV            +PALAQL                    +M+K+RSSS
Sbjct: 77  MHFLVGAPPVIVFSSACAGLAGGTIPALAQLVSSSYHSATASSFAHTTSRDEMHKARSSS 136

Query: 485 TL 490
           TL
Sbjct: 137 TL 138


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