BLASTX nr result

ID: Bupleurum21_contig00020539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020539
         (781 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133919.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   154   3e-35
ref|XP_004155787.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   150   3e-34
ref|XP_002280994.2| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   144   2e-32
ref|XP_002280967.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   142   6e-32
ref|XP_002281007.1| PREDICTED: UDP-glucuronate 4-epimerase 3-lik...   141   2e-31

>ref|XP_004133919.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Cucumis sativus]
          Length = 438

 Score =  154 bits (388), Expect = 3e-35
 Identities = 81/135 (60%), Positives = 87/135 (64%)
 Frame = -1

Query: 406 EMKQISHIDNIPSTPGKFKMEKSPYMHRLRWHFSLAKLTFWSXXXXXXXXXXXXXXXXXX 227
           E+K +SH+DNIPSTPGKFKM+KSPY+HRLRWH SL KLTFWS                  
Sbjct: 3   EIKVMSHLDNIPSTPGKFKMDKSPYIHRLRWHSSLTKLTFWSLVILGSILIFFFRSPSSS 62

Query: 226 XXXXXXXXXXXXXRTSSWGGLAWEKXXXXXXXXXXRNGISVLVTGAAGFVGTHVSVALKR 47
                         T  WGG AWEK          RNGISVLVTGAAGFVGTHVSVALKR
Sbjct: 63  PLPSDHSRRSLS--TYDWGGPAWEKRVRSSARVRSRNGISVLVTGAAGFVGTHVSVALKR 120

Query: 46  RGDGVLGLDNFNDYY 2
           RGDGVLGLDNFN+YY
Sbjct: 121 RGDGVLGLDNFNNYY 135


>ref|XP_004155787.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Cucumis sativus]
          Length = 432

 Score =  150 bits (379), Expect = 3e-34
 Identities = 79/131 (60%), Positives = 84/131 (64%)
 Frame = -1

Query: 394 ISHIDNIPSTPGKFKMEKSPYMHRLRWHFSLAKLTFWSXXXXXXXXXXXXXXXXXXXXXX 215
           +SH+DNIPSTPGKFKM+KSPY+HRLRWH SL KLTFWS                      
Sbjct: 1   MSHLDNIPSTPGKFKMDKSPYIHRLRWHSSLTKLTFWSLVILGSILIFFFRSPSSSPLPS 60

Query: 214 XXXXXXXXXRTSSWGGLAWEKXXXXXXXXXXRNGISVLVTGAAGFVGTHVSVALKRRGDG 35
                     T  WGG AWEK          RNGISVLVTGAAGFVGTHVSVALKRRGDG
Sbjct: 61  DHSRRSLS--TYDWGGPAWEKRVRSSARVRSRNGISVLVTGAAGFVGTHVSVALKRRGDG 118

Query: 34  VLGLDNFNDYY 2
           VLGLDNFN+YY
Sbjct: 119 VLGLDNFNNYY 129


>ref|XP_002280994.2| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Vitis vinifera]
          Length = 512

 Score =  144 bits (363), Expect = 2e-32
 Identities = 81/142 (57%), Positives = 86/142 (60%)
 Frame = -1

Query: 427 LWSNIFQEMKQISHIDNIPSTPGKFKMEKSPYMHRLRWHFSLAKLTFWSXXXXXXXXXXX 248
           LW     ++KQ+SH+DNIPSTPGKFKMEK     RLRWH SLAKLTFWS           
Sbjct: 77  LWKK--SQLKQMSHLDNIPSTPGKFKMEK-----RLRWHSSLAKLTFWSFVFSGLIFIVL 129

Query: 247 XXXXXXXXXXXXXXXXXXXXRTSSWGGLAWEKXXXXXXXXXXRNGISVLVTGAAGFVGTH 68
                                T SWGG AWEK          RNGISVLVTGAAGFVGTH
Sbjct: 130 FLSPSSSSLPSDPTRRSLR--THSWGGPAWEKRVRSSAKVRARNGISVLVTGAAGFVGTH 187

Query: 67  VSVALKRRGDGVLGLDNFNDYY 2
           VS ALKRRGDGV+GLDNFNDYY
Sbjct: 188 VSAALKRRGDGVIGLDNFNDYY 209


>ref|XP_002280967.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like [Vitis vinifera]
          Length = 433

 Score =  142 bits (359), Expect = 6e-32
 Identities = 79/135 (58%), Positives = 84/135 (62%)
 Frame = -1

Query: 406 EMKQISHIDNIPSTPGKFKMEKSPYMHRLRWHFSLAKLTFWSXXXXXXXXXXXXXXXXXX 227
           ++KQ+SH+DNIPSTPGKFKMEK     RLRWH SLAKLTFWS                  
Sbjct: 3   QLKQMSHLDNIPSTPGKFKMEK-----RLRWHSSLAKLTFWSFVFLGLIFIFFFLSPSSS 57

Query: 226 XXXXXXXXXXXXXRTSSWGGLAWEKXXXXXXXXXXRNGISVLVTGAAGFVGTHVSVALKR 47
                         T SWGG AWEK          RNGISVLVTGAAGFVGTHVS ALKR
Sbjct: 58  SLPSDPSRRSLR--TYSWGGPAWEKRVRSSAKVRARNGISVLVTGAAGFVGTHVSAALKR 115

Query: 46  RGDGVLGLDNFNDYY 2
           RGDGV+GLDNFNDYY
Sbjct: 116 RGDGVVGLDNFNDYY 130


>ref|XP_002281007.1| PREDICTED: UDP-glucuronate 4-epimerase 3-like isoform 1 [Vitis
           vinifera]
          Length = 433

 Score =  141 bits (355), Expect = 2e-31
 Identities = 78/135 (57%), Positives = 84/135 (62%)
 Frame = -1

Query: 406 EMKQISHIDNIPSTPGKFKMEKSPYMHRLRWHFSLAKLTFWSXXXXXXXXXXXXXXXXXX 227
           ++KQ+SH+DNIPSTPGKFKMEK     RLRWH SLAKLTFWS                  
Sbjct: 3   QLKQMSHLDNIPSTPGKFKMEK-----RLRWHSSLAKLTFWSFVFSGLIFIFFFRSPSSS 57

Query: 226 XXXXXXXXXXXXXRTSSWGGLAWEKXXXXXXXXXXRNGISVLVTGAAGFVGTHVSVALKR 47
                         + SWGG AWEK          RNGISVLVTGAAGFVGTHVS ALKR
Sbjct: 58  SLPSDSSIRSFR--SYSWGGPAWEKRVRSSAKVRARNGISVLVTGAAGFVGTHVSAALKR 115

Query: 46  RGDGVLGLDNFNDYY 2
           RGDGV+GLDNFNDYY
Sbjct: 116 RGDGVVGLDNFNDYY 130


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