BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020534
         (352 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]   145   4e-33
ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containi...   142   4e-32
ref|XP_004163995.1| PREDICTED: pentatricopeptide repeat-containi...   120   9e-26
ref|XP_004146805.1| PREDICTED: pentatricopeptide repeat-containi...   120   9e-26
ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat...   108   5e-22

>emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  145 bits (365), Expect = 4e-33
 Identities = 66/116 (56%), Positives = 87/116 (75%)
 Frame = -2

Query: 351 GKEIHGYIIKNNIEDNIFVQCALVDVYAKCHDIGLATKVFWNIKHRNTVTWNTMISGHIN 172
           GKEIHGY ++N  E NIFV  ALVD+YAKCHD+  A KVF+ I  RNTV+WN +++G+IN
Sbjct: 556 GKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYIN 615

Query: 171 SSQPEKALEYFHKMLCESIEPTSITFMVLIPACSDMKALNVGRELHGYIVKSRFLE 4
           + QPE+AL+ F +ML E ++P+SITFM+L PAC D+ A+  GR LHGY  K +  E
Sbjct: 616 NKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDE 671



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 28/90 (31%), Positives = 56/90 (62%)
 Frame = -2

Query: 351 GKEIHGYIIKNNIEDNIFVQCALVDVYAKCHDIGLATKVFWNIKHRNTVTWNTMISGHIN 172
           GK +HG++I+ ++E ++FV  AL+  Y+ C D+G +  VF +++ R+ V+W  +IS ++ 
Sbjct: 202 GKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYME 261

Query: 171 SSQPEKALEYFHKMLCESIEPTSITFMVLI 82
               ++A   FH M  + ++P  I++  L+
Sbjct: 262 EGLXDEAKHIFHLMQLDGVKPDLISWSALL 291



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 30/90 (33%), Positives = 51/90 (56%)
 Frame = -2

Query: 351 GKEIHGYIIKNNIEDNIFVQCALVDVYAKCHDIGLATKVFWNIKHRNTVTWNTMISGHIN 172
           GK IH    K+ I  N++V+ +++D+Y+KC     A KVF   +++NT  WN MI+ ++N
Sbjct: 373 GKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKNTAMWNEMIAAYVN 432

Query: 171 SSQPEKALEYFHKMLCESIEPTSITFMVLI 82
             + E AL     M  +  +P  IT+  ++
Sbjct: 433 EGKVEDALGLLRSMQKDGWKPDVITYNTIL 462



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 34/114 (29%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
 Frame = -2

Query: 348 KEIHGYIIKNNIEDNIFVQCALVDVYAKCHDIGLATKVFWNIKHRN---TV-TWNTMISG 181
           K I   +  + ++ ++    AL+  +A+  +I LA +    +  R    TV +WN +ISG
Sbjct: 269 KHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEMPERGLQPTVNSWNGIISG 328

Query: 180 HINSSQPEKALEYFHKMLCESIEPTSITFMVLIPACSDMKALNVGRELHGYIVK 19
            + +   E AL+ F +ML    +P  IT   ++PAC+ +KAL +G+ +H    K
Sbjct: 329 CVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXK 382



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
 Frame = -2

Query: 351 GKEIHGYIIKNNIED-NIFVQCALVDVYAKCHDIGLATKVFWNIKHRNTVTWNTMISGHI 175
           G+ +HGY  K  +++    +  AL+D+YAKC  I  A  VF +   ++   WN MIS   
Sbjct: 657 GRGLHGYAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFS 716

Query: 174 NSSQPEKALEYFHKMLCESIEPTSITFMVLIPACS 70
                  A   F +M    I P  ITF+ L+ AC+
Sbjct: 717 VHGMARNAFAVFXQMELLGIXPDHITFVSLLSACA 751


>ref|XP_002284321.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Vitis vinifera]
          Length = 700

 Score =  142 bits (357), Expect = 4e-32
 Identities = 65/116 (56%), Positives = 86/116 (74%)
 Frame = -2

Query: 351 GKEIHGYIIKNNIEDNIFVQCALVDVYAKCHDIGLATKVFWNIKHRNTVTWNTMISGHIN 172
           GKEIHGY ++N  E NIFV  ALVD+YAKCHD+  A KVF+ I  RNTV+WN +++G+I 
Sbjct: 247 GKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYIY 306

Query: 171 SSQPEKALEYFHKMLCESIEPTSITFMVLIPACSDMKALNVGRELHGYIVKSRFLE 4
           + QPE+AL+ F +ML E ++P+SITFM+L PAC D+ A+  GR LHGY  K +  E
Sbjct: 307 NKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDE 362



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 30/90 (33%), Positives = 52/90 (57%)
 Frame = -2

Query: 351 GKEIHGYIIKNNIEDNIFVQCALVDVYAKCHDIGLATKVFWNIKHRNTVTWNTMISGHIN 172
           GK IH   +K+ I  N++V+ +++D+Y+KC     A KVF   +++NT  WN MI+ ++N
Sbjct: 64  GKAIHAIALKHGIVGNVYVEGSVIDMYSKCGSYDYAEKVFVKAENKNTAMWNEMIAAYVN 123

Query: 171 SSQPEKALEYFHKMLCESIEPTSITFMVLI 82
             + E AL     M  +  +P  IT+  ++
Sbjct: 124 EGKVEDALGLLRSMQKDGWKPDVITYNTIL 153


>ref|XP_004163995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Cucumis sativus]
          Length = 177

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/116 (49%), Positives = 82/116 (70%)
 Frame = -2

Query: 351 GKEIHGYIIKNNIEDNIFVQCALVDVYAKCHDIGLATKVFWNIKHRNTVTWNTMISGHIN 172
           GKEIHGY+++N   +N F+  AL+++YAKC DI  A +VF  IK+RN V WN +I+G + 
Sbjct: 39  GKEIHGYMLRNYFVNNYFISSALINMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLR 98

Query: 171 SSQPEKALEYFHKMLCESIEPTSITFMVLIPACSDMKALNVGRELHGYIVKSRFLE 4
           + Q + A+E F +ML E I+P+S TF +L+PA S+   L V R+LH YI+KS+ LE
Sbjct: 99  TMQHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLE 154


>ref|XP_004146805.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g19720-like [Cucumis sativus]
          Length = 677

 Score =  120 bits (302), Expect = 9e-26
 Identities = 57/116 (49%), Positives = 82/116 (70%)
 Frame = -2

Query: 351 GKEIHGYIIKNNIEDNIFVQCALVDVYAKCHDIGLATKVFWNIKHRNTVTWNTMISGHIN 172
           GKEIHGY+++N   +N F+  AL+++YAKC DI  A +VF  IK+RN V WN +I+G + 
Sbjct: 539 GKEIHGYMLRNYFVNNYFISSALINMYAKCGDIDSAIQVFSRIKNRNVVCWNALIAGLLR 598

Query: 171 SSQPEKALEYFHKMLCESIEPTSITFMVLIPACSDMKALNVGRELHGYIVKSRFLE 4
           + Q + A+E F +ML E I+P+S TF +L+PA S+   L V R+LH YI+KS+ LE
Sbjct: 599 TMQHKMAVELFCQMLVEGIKPSSATFSILLPALSERADLKVRRQLHSYIIKSQHLE 654



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 27/90 (30%), Positives = 50/90 (55%)
 Frame = -2

Query: 351 GKEIHGYIIKNNIEDNIFVQCALVDVYAKCHDIGLATKVFWNIKHRNTVTWNTMISGHIN 172
           GK  HGY I+  +  +I ++ AL+D Y  C D+  +  VF ++  ++ V+W  ++S +I 
Sbjct: 187 GKMAHGYAIRKRMVSDIVIENALMDFYGNCGDLSSSINVFDSMSEKDVVSWTALVSAYIE 246

Query: 171 SSQPEKALEYFHKMLCESIEPTSITFMVLI 82
                +A+E FH M    ++P  I++  L+
Sbjct: 247 EGLLNEAMEVFHSMQSSGLKPDLISWNALV 276



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 28/90 (31%), Positives = 52/90 (57%)
 Frame = -2

Query: 351 GKEIHGYIIKNNIEDNIFVQCALVDVYAKCHDIGLATKVFWNIKHRNTVTWNTMISGHIN 172
           G+ +H Y +K  +  NI+V+ +LVD+Y+KC     A ++F   + +N   WN +I+ ++N
Sbjct: 358 GRAVHAYALKCELCTNIYVEGSLVDMYSKCGQDDRAEEIFAKAEKKNITLWNEIIATYMN 417

Query: 171 SSQPEKALEYFHKMLCESIEPTSITFMVLI 82
             +   ALE+F  M    ++P  +T+  L+
Sbjct: 418 QGKNSWALEHFRSMQHHGLKPDVVTYNTLL 447


>ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  108 bits (270), Expect = 5e-22
 Identities = 42/114 (36%), Positives = 81/114 (71%)
 Frame = -2

Query: 351 GKEIHGYIIKNNIEDNIFVQCALVDVYAKCHDIGLATKVFWNIKHRNTVTWNTMISGHIN 172
           GKEIHGY I+N  + ++F+  +L+D+YAKC  +  + +VF+ +   + ++WN++I+G + 
Sbjct: 255 GKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRVFYMLPQHDGISWNSIIAGCVQ 314

Query: 171 SSQPEKALEYFHKMLCESIEPTSITFMVLIPACSDMKALNVGRELHGYIVKSRF 10
           +   ++ L++F +ML   I+P  ++F  ++PAC+ +  L++G++LHGYI++SRF
Sbjct: 315 NGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRF 368



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 35/94 (37%), Positives = 57/94 (60%)
 Frame = -2

Query: 351 GKEIHGYIIKNNIEDNIFVQCALVDVYAKCHDIGLATKVFWNIKHRNTVTWNTMISGHIN 172
           GK++HGYII++  + N+F+  ALVD+YAKC +I  A  +F  ++  + V+W  MI G+  
Sbjct: 356 GKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYAL 415

Query: 171 SSQPEKALEYFHKMLCESIEPTSITFMVLIPACS 70
                 A+  F +M  E ++P  + FM ++ ACS
Sbjct: 416 HGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACS 449



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 4/107 (3%)
 Frame = -2

Query: 318 NIEDNIFVQCALVDVYAK----CHDIGLATKVFWNIKHRNTVTWNTMISGHINSSQPEKA 151
           N    +F +    DVY+K     + +G   KVF  +  R+ V+WNT+ISG+  +   E A
Sbjct: 161 NTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHEDA 220

Query: 150 LEYFHKMLCESIEPTSITFMVLIPACSDMKALNVGRELHGYIVKSRF 10
           L    +M    + P S T   ++P  ++   L  G+E+HGY +++ +
Sbjct: 221 LMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGY 267