BLASTX nr result

ID: Bupleurum21_contig00020530 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020530
         (549 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   221   6e-56
ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840...   218   4e-55
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...   216   1e-54
gb|ABB00038.1| reverse transcriptase family member [Glycine max]      211   6e-53
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...   206   2e-51

>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score =  221 bits (563), Expect = 6e-56
 Identities = 102/183 (55%), Positives = 140/183 (76%)
 Frame = -1

Query: 549 IPRDAIWRSLLARGVSSSYVSAIQDMYAQACTCVRTPVGDSRFFPVEVGLHQGSALSPLL 370
           + RD IWR L  +GV  +Y+ AI+DMY  A T VRT  G +  FP+ VGLHQGS+LSP L
Sbjct: 316 VSRDIIWRILEKKGVRVAYIQAIKDMYEGAKTAVRTYEGQTESFPITVGLHQGSSLSPYL 375

Query: 369 FALVLDVISRGIQDGVPWCMIFADDIVLVAESRGEANAKLELWRSTLESQGLRVSRSKTE 190
           FALV+D ++  IQD +PWCM+FA DIVL+ E++   NAKL LWR  LES+GL +SRSKTE
Sbjct: 376 FALVMDELTGHIQDDIPWCMLFAYDIVLIDETQEGVNAKLNLWREVLESKGLCLSRSKTE 435

Query: 189 YLWCNFSGEANEEGVEVRIEDQLVPRTDKFKYLGSIIQKDGEIEEDVSHRIKAGWLRWRA 10
           Y+ C FS   ++  + VRI DQ +P++D+F+YLGSI+QK+GE++ED++HRI+AGW++W++
Sbjct: 436 YMECKFSANGSQNELGVRIGDQEIPKSDRFRYLGSILQKNGELDEDLNHRIQAGWMKWKS 495

Query: 9   GSG 1
            SG
Sbjct: 496 ASG 498


>ref|XP_003581610.1| PREDICTED: uncharacterized protein LOC100840703 [Brachypodium
           distachyon]
          Length = 567

 Score =  218 bits (556), Expect = 4e-55
 Identities = 103/184 (55%), Positives = 137/184 (74%), Gaps = 1/184 (0%)
 Frame = -1

Query: 549 IPRDAIWRSLLARGVSSSYVSAIQDMYAQACTCVRTPVGDSRFFPVEVGLHQGSALSPLL 370
           IPR+ +W +L    V + Y++ I+DMY    T VRT  GD+  FP+++GLHQGSALSP L
Sbjct: 230 IPRNVMWWALEKHKVPAKYITLIKDMYDNVVTSVRTSDGDTDDFPIKIGLHQGSALSPYL 289

Query: 369 FALVLDVISRGIQDGVPWCMIFADDIVLVAESRGEANAKLELWRSTLESQGLRVSRSKTE 190
           F LV+D ++R IQ  +PWCM+FADD+VLV +SR   N KLELWR  LES+G R+SR+KTE
Sbjct: 290 FDLVMDEVTRDIQGDIPWCMLFADDVVLVDDSRTGVNRKLELWRQILESKGFRLSRTKTE 349

Query: 189 YLWCNFSGEA-NEEGVEVRIEDQLVPRTDKFKYLGSIIQKDGEIEEDVSHRIKAGWLRWR 13
           Y+ C FS     EE  EV ++ Q+VP+ D F+YLGS++QKDG+I+EDV+HRIKAGW++WR
Sbjct: 350 YMKCGFSTTTPEEEEEEVSLDGQVVPQKDTFRYLGSMLQKDGDIDEDVNHRIKAGWMKWR 409

Query: 12  AGSG 1
             SG
Sbjct: 410 QASG 413


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score =  216 bits (551), Expect = 1e-54
 Identities = 98/182 (53%), Positives = 134/182 (73%)
 Frame = -1

Query: 549 IPRDAIWRSLLARGVSSSYVSAIQDMYAQACTCVRTPVGDSRFFPVEVGLHQGSALSPLL 370
           +PR+ +W++L  + V  +Y+ AI+DMY +A T V+T  G +  FP+ +GLHQGS L+P L
Sbjct: 294 VPREILWKALEKKRVRIAYIRAIKDMYERASTSVKTQDGTTEDFPITIGLHQGSTLTPYL 353

Query: 369 FALVLDVISRGIQDGVPWCMIFADDIVLVAESRGEANAKLELWRSTLESQGLRVSRSKTE 190
           F LVLDV++  IQ+  P CM+FADD+VLV ESR E N +LE WR  LE+ G R+SRSKT+
Sbjct: 354 FTLVLDVLTEHIQELAPRCMLFADDVVLVGESREEVNGRLETWRQALEAYGFRLSRSKTK 413

Query: 189 YLWCNFSGEANEEGVEVRIEDQLVPRTDKFKYLGSIIQKDGEIEEDVSHRIKAGWLRWRA 10
           Y+ CNFSG  +   +EV++ D ++P+  +FKYLGS +Q DGEIE DVSHRI+AGWL+WR 
Sbjct: 414 YMECNFSGRRSRSTLEVKVGDHIIPQVTRFKYLGSFVQNDGEIEADVSHRIQAGWLKWRR 473

Query: 9   GS 4
            S
Sbjct: 474 AS 475


>gb|ABB00038.1| reverse transcriptase family member [Glycine max]
          Length = 377

 Score =  211 bits (537), Expect = 6e-53
 Identities = 99/183 (54%), Positives = 134/183 (73%)
 Frame = -1

Query: 549 IPRDAIWRSLLARGVSSSYVSAIQDMYAQACTCVRTPVGDSRFFPVEVGLHQGSALSPLL 370
           +PR+ +W++L  +GV  +Y+ AIQDMY +  T VRT  G+S  FP+ +GLHQGS LSP L
Sbjct: 41  VPREILWKALEKKGVRVAYIRAIQDMYDRVSTSVRTQGGESDDFPITIGLHQGSTLSPYL 100

Query: 369 FALVLDVISRGIQDGVPWCMIFADDIVLVAESRGEANAKLELWRSTLESQGLRVSRSKTE 190
           F L+LDV++  IQ+  P CM+FADDIVL+ ESR E N +LE WR  LE+ G R+SRSK+E
Sbjct: 101 FTLILDVLTEQIQEIAPRCMLFADDIVLLGESREELNERLETWRRALETHGFRLSRSKSE 160

Query: 189 YLWCNFSGEANEEGVEVRIEDQLVPRTDKFKYLGSIIQKDGEIEEDVSHRIKAGWLRWRA 10
           Y+ C F+ +      EV+I D ++P+  +FKYLGS+IQ DGEIE DV+HRI+AGW++WR 
Sbjct: 161 YMECQFN-KRRVSNSEVKIGDHIIPQVTRFKYLGSVIQDDGEIEGDVNHRIQAGWMKWRK 219

Query: 9   GSG 1
            SG
Sbjct: 220 ASG 222


>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score =  206 bits (525), Expect = 2e-51
 Identities = 98/178 (55%), Positives = 129/178 (72%)
 Frame = -1

Query: 534  IWRSLLARGVSSSYVSAIQDMYAQACTCVRTPVGDSRFFPVEVGLHQGSALSPLLFALVL 355
            +W+ L  R V  +Y+ AI+DMY  A T V+T  G +  FP+ +GLHQGS+LSP LF LVL
Sbjct: 1069 LWKVLEKRRVRIAYIRAIKDMYEGATTSVKTQGGVTEEFPIGIGLHQGSSLSPYLFTLVL 1128

Query: 354  DVISRGIQDGVPWCMIFADDIVLVAESRGEANAKLELWRSTLESQGLRVSRSKTEYLWCN 175
            +V++  IQ+ VPWCM+FADDIVL+ ESR + N KLELWR  LE  GLR+SRSKTEY+ C 
Sbjct: 1129 EVLTEHIQEPVPWCMLFADDIVLMGESREDLNKKLELWREALEVYGLRISRSKTEYMECK 1188

Query: 174  FSGEANEEGVEVRIEDQLVPRTDKFKYLGSIIQKDGEIEEDVSHRIKAGWLRWRAGSG 1
            FS       +EV+I + ++ +   FKYLG IIQ +GEIE+DV+HRI+AGW +WR+ SG
Sbjct: 1189 FSLRRENSNIEVKIGENILRKVKSFKYLGCIIQDNGEIEQDVNHRIQAGWSKWRSASG 1246


Top