BLASTX nr result

ID: Bupleurum21_contig00020527 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020527
         (700 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]   253   3e-65
ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containin...   251   7e-65
ref|XP_002314462.1| predicted protein [Populus trichocarpa] gi|2...   247   1e-63
ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|2...   241   8e-62
ref|XP_003529584.1| PREDICTED: zinc finger CCCH domain-containin...   238   7e-61

>emb|CAN78551.1| hypothetical protein VITISV_003243 [Vitis vinifera]
          Length = 518

 Score =  253 bits (646), Expect = 3e-65
 Identities = 120/215 (55%), Positives = 141/215 (65%), Gaps = 1/215 (0%)
 Frame = -3

Query: 698 MQSPG-PSSQQYGVVAGNWPVARHGLIPGSYVQGSYXXXXXXXXXXXMAGWNPYXXXXXX 522
           +QSP  PSSQQYG+V     VAR  L+P SY+ G Y             GW+ Y      
Sbjct: 235 VQSPSVPSSQQYGLV-----VARPPLLPSSYIHGPYSPVLIPPGMVPFPGWSHYPAPVSP 289

Query: 521 XXXXXXXXXXXXXPIYGMQQLSSSAPAYAGPYISMPSPAGHSGFDQREHAFPERPGQPEC 342
                         +YG+  LS SAPAY GPY  +PS  G S   Q+E  FPERPGQPEC
Sbjct: 290 VASPSTQPTVGSGQMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQKEQIFPERPGQPEC 349

Query: 341 QHYIKTGECKFGPSCRYHHPPQWSAPNTTFVLSPMGLPLRPGAPLCSHYALNGVCKFGHS 162
           Q+Y++TG+CKFG SC+YHHPP+W  P T  VLSPMGLPLRPGAP C+HYA  G+CKFG +
Sbjct: 350 QYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCTHYAQRGICKFGPT 409

Query: 161 CKFNHPMSTLNYSPSTSSLTDMPVAPYPVGSAMAT 57
           CKF+HPM TL+YSPS SSL DMPVAPYPVGS+M T
Sbjct: 410 CKFDHPMGTLSYSPSASSLADMPVAPYPVGSSMGT 444



 Score =  104 bits (260), Expect = 1e-20
 Identities = 44/76 (57%), Positives = 52/76 (68%)
 Frame = -3

Query: 371 FPERPGQPECQHYIKTGECKFGPSCRYHHPPQWSAPNTTFVLSPMGLPLRPGAPLCSHYA 192
           FPER GQP CQ Y+KTG CKFG SC+YHHP Q     +   L+  G PLRPG   CS+Y 
Sbjct: 132 FPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEKECSYYV 191

Query: 191 LNGVCKFGHSCKFNHP 144
             G+CKFG +CKF+HP
Sbjct: 192 KTGLCKFGETCKFHHP 207


>ref|XP_002276435.1| PREDICTED: zinc finger CCCH domain-containing protein 32 [Vitis
           vinifera] gi|297736890|emb|CBI26091.3| unnamed protein
           product [Vitis vinifera]
          Length = 478

 Score =  251 bits (642), Expect = 7e-65
 Identities = 120/215 (55%), Positives = 140/215 (65%), Gaps = 1/215 (0%)
 Frame = -3

Query: 698 MQSPG-PSSQQYGVVAGNWPVARHGLIPGSYVQGSYXXXXXXXXXXXMAGWNPYXXXXXX 522
           +QSP  PSSQQYG+V     VAR  L+P SY  G Y             GW+ Y      
Sbjct: 195 VQSPSVPSSQQYGLV-----VARPPLLPSSYFHGPYSPVLIPPGMVPFPGWSHYPAPVSP 249

Query: 521 XXXXXXXXXXXXXPIYGMQQLSSSAPAYAGPYISMPSPAGHSGFDQREHAFPERPGQPEC 342
                         +YG+  LS SAPAY GPY  +PS  G S   Q+E  FPERPGQPEC
Sbjct: 250 VASPSTQPTVGSGQMYGLTPLSPSAPAYTGPYTPLPSSVGPSSSSQKEQIFPERPGQPEC 309

Query: 341 QHYIKTGECKFGPSCRYHHPPQWSAPNTTFVLSPMGLPLRPGAPLCSHYALNGVCKFGHS 162
           Q+Y++TG+CKFG SC+YHHPP+W  P T  VLSPMGLPLRPGAP C+HYA  G+CKFG +
Sbjct: 310 QYYMRTGDCKFGSSCKYHHPPEWDTPKTNCVLSPMGLPLRPGAPQCTHYAQRGICKFGPT 369

Query: 161 CKFNHPMSTLNYSPSTSSLTDMPVAPYPVGSAMAT 57
           CKF+HPM TL+YSPS SSL DMPVAPYPVGS+M T
Sbjct: 370 CKFDHPMGTLSYSPSASSLADMPVAPYPVGSSMGT 404



 Score =  105 bits (261), Expect = 1e-20
 Identities = 51/105 (48%), Positives = 62/105 (59%)
 Frame = -3

Query: 371 FPERPGQPECQHYIKTGECKFGPSCRYHHPPQWSAPNTTFVLSPMGLPLRPGAPLCSHYA 192
           FPER GQP CQ Y+KTG CKFG SC+YHHP Q     +   L+  G PLRPG   CS+Y 
Sbjct: 92  FPERVGQPVCQFYMKTGTCKFGASCKYHHPRQGGGTVSPVTLNYFGYPLRPGEKECSYYV 151

Query: 191 LNGVCKFGHSCKFNHPMSTLNYSPSTSSLTDMPVAPYPVGSAMAT 57
             G+CKFG +CKF+HP    +   ST     +P AP P  +   T
Sbjct: 152 KTGLCKFGETCKFHHPQPD-SIQLSTPGPAALP-APVPAHTLYPT 194


>ref|XP_002314462.1| predicted protein [Populus trichocarpa] gi|222863502|gb|EEF00633.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score =  247 bits (631), Expect = 1e-63
 Identities = 121/215 (56%), Positives = 140/215 (65%), Gaps = 1/215 (0%)
 Frame = -3

Query: 698 MQSPG-PSSQQYGVVAGNWPVARHGLIPGSYVQGSYXXXXXXXXXXXMAGWNPYXXXXXX 522
           MQSP  PSSQQYGV+     VAR  L+PGSYVQG Y              W+PY      
Sbjct: 193 MQSPSVPSSQQYGVM-----VARPPLLPGSYVQGPYGPVLLSPSLVPYPSWSPYPAPVSP 247

Query: 521 XXXXXXXXXXXXXPIYGMQQLSSSAPAYAGPYISMPSPAGHSGFDQREHAFPERPGQPEC 342
                         +YG+  LS SAPAY G Y S+P+  G S   Q+EH FPERPGQPEC
Sbjct: 248 VASPNAQPAVGSGSVYGISPLSPSAPAYTGAYQSIPTAKGPSSSSQKEHVFPERPGQPEC 307

Query: 341 QHYIKTGECKFGPSCRYHHPPQWSAPNTTFVLSPMGLPLRPGAPLCSHYALNGVCKFGHS 162
           Q+Y+KTG+CKF  SCRYHHPP+     T  VLSPMGLPLRPGAP C+HY  +G CKFG +
Sbjct: 308 QYYMKTGDCKFESSCRYHHPPELVTSKTNVVLSPMGLPLRPGAPTCTHYTQHGQCKFGPA 367

Query: 161 CKFNHPMSTLNYSPSTSSLTDMPVAPYPVGSAMAT 57
           CKF+HPM TL+YSPS SSL DMPVAPYPVGS++ T
Sbjct: 368 CKFDHPMGTLSYSPSASSLADMPVAPYPVGSSIGT 402



 Score = 97.8 bits (242), Expect = 2e-18
 Identities = 44/96 (45%), Positives = 57/96 (59%)
 Frame = -3

Query: 371 FPERPGQPECQHYIKTGECKFGPSCRYHHPPQWSAPNTTFVLSPMGLPLRPGAPLCSHYA 192
           FPER GQP CQ+Y++TG CKFG SC+Y+HP Q  +      L+  G PLRPG   C++Y 
Sbjct: 90  FPERVGQPLCQYYMRTGTCKFGASCKYNHPKQGGSSVRPVSLNYYGYPLRPGERECTYYI 149

Query: 191 LNGVCKFGHSCKFNHPMSTLNYSPSTSSLTDMPVAP 84
             G CKFG +CKF+HP       P+ S    +   P
Sbjct: 150 KTGQCKFGATCKFHHPQPANMQIPAQSLAPQVASVP 185



 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 35/81 (43%), Positives = 47/81 (58%)
 Frame = -3

Query: 386 QREHAFPERPGQPECQHYIKTGECKFGPSCRYHHPPQWSAPNTTFVLSPMGLPLRPGAPL 207
           + E  +PERP + +C +Y++TG C +G  CRY+HP   +A            P R G PL
Sbjct: 39  ETESEYPERPNEQDCMYYLRTGFCGYGARCRYNHPRDRTAVLGAARAGGGEFPERVGQPL 98

Query: 206 CSHYALNGVCKFGHSCKFNHP 144
           C +Y   G CKFG SCK+NHP
Sbjct: 99  CQYYMRTGTCKFGASCKYNHP 119



 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 19/32 (59%), Positives = 27/32 (84%)
 Frame = -3

Query: 377 HAFPERPGQPECQHYIKTGECKFGPSCRYHHP 282
           + +P RPG+ EC +YIKTG+CKFG +C++HHP
Sbjct: 134 YGYPLRPGERECTYYIKTGQCKFGATCKFHHP 165


>ref|XP_002330352.1| predicted protein [Populus trichocarpa] gi|222871556|gb|EEF08687.1|
           predicted protein [Populus trichocarpa]
          Length = 477

 Score =  241 bits (616), Expect = 8e-62
 Identities = 120/215 (55%), Positives = 137/215 (63%), Gaps = 1/215 (0%)
 Frame = -3

Query: 698 MQSPG-PSSQQYGVVAGNWPVARHGLIPGSYVQGSYXXXXXXXXXXXMAGWNPYXXXXXX 522
           +QSP  PSSQQYGV+     VAR  L+PGSYVQG Y              WNPY      
Sbjct: 193 VQSPSVPSSQQYGVM-----VARPPLLPGSYVQGPYGPVLLSPSVVPYPSWNPYPAPVSP 247

Query: 521 XXXXXXXXXXXXXPIYGMQQLSSSAPAYAGPYISMPSPAGHSGFDQREHAFPERPGQPEC 342
                         +YGM  LS SAPAY G + S+P   G S   Q+EH FPERPGQPEC
Sbjct: 248 VASPNTQPAVGSGSVYGMSALSPSAPAYTGAFQSIPPATGPSSSTQKEHLFPERPGQPEC 307

Query: 341 QHYIKTGECKFGPSCRYHHPPQWSAPNTTFVLSPMGLPLRPGAPLCSHYALNGVCKFGHS 162
           Q+YIKTG+CKF  SCRYHHPP+     +  VLSP+GLPLRPGAP CSHY   G CKFG +
Sbjct: 308 QYYIKTGDCKFRSSCRYHHPPELVVSKSNVVLSPIGLPLRPGAPTCSHYTQRGQCKFGPA 367

Query: 161 CKFNHPMSTLNYSPSTSSLTDMPVAPYPVGSAMAT 57
           CKF+HPM TL+YSPS SSL DMPVAPY VGS++ T
Sbjct: 368 CKFDHPMGTLSYSPSASSLADMPVAPYLVGSSIGT 402



 Score =  100 bits (250), Expect = 2e-19
 Identities = 45/98 (45%), Positives = 58/98 (59%)
 Frame = -3

Query: 371 FPERPGQPECQHYIKTGECKFGPSCRYHHPPQWSAPNTTFVLSPMGLPLRPGAPLCSHYA 192
           +PER GQP CQ+Y++TG CKFG SC+YHHP Q     +   L+  G PLRPG   C++Y 
Sbjct: 90  YPERAGQPLCQYYMRTGTCKFGASCKYHHPKQGGGSASPVSLNYYGYPLRPGERECTYYI 149

Query: 191 LNGVCKFGHSCKFNHPMSTLNYSPSTSSLTDMPVAPYP 78
             G CKFG +CKF+HP       P+ S    +   P P
Sbjct: 150 KTGQCKFGATCKFHHPQPGNIQIPAQSLAPQIAPVPGP 187



 Score = 85.1 bits (209), Expect = 1e-14
 Identities = 41/112 (36%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
 Frame = -3

Query: 467 QQLSSSAPAY----AGPYISMPSPAGHSGFDQREHAFPERPGQPECQHYIKTGECKFGPS 300
           Q+ S S PA     +GP   +       G  + E  +PER  + +C +Y++TG C +G  
Sbjct: 8   QEGSQSDPALEWTGSGPETGLEEGVWQLGLGETESEYPERSNEQDCMYYLRTGFCGYGAR 67

Query: 299 CRYHHPPQWSAPNTTFVLSPMGLPLRPGAPLCSHYALNGVCKFGHSCKFNHP 144
           CRY+HP   +A            P R G PLC +Y   G CKFG SCK++HP
Sbjct: 68  CRYNHPRDRNAVLGAARAGGAEYPERAGQPLCQYYMRTGTCKFGASCKYHHP 119



 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 25/57 (43%), Positives = 36/57 (63%)
 Frame = -3

Query: 377 HAFPERPGQPECQHYIKTGECKFGPSCRYHHPPQWSAPNTTFVLSPMGLPLRPGAPL 207
           + +P RPG+ EC +YIKTG+CKFG +C++HHP   +       L+P   P+ PG  L
Sbjct: 134 YGYPLRPGERECTYYIKTGQCKFGATCKFHHPQPGNIQIPAQSLAPQIAPV-PGPTL 189


>ref|XP_003529584.1| PREDICTED: zinc finger CCCH domain-containing protein 32-like
           [Glycine max]
          Length = 484

 Score =  238 bits (608), Expect = 7e-61
 Identities = 116/211 (54%), Positives = 134/211 (63%), Gaps = 1/211 (0%)
 Frame = -3

Query: 686 GPSSQQYGVVAGNWPVARHGLIPGSYVQGSYXXXXXXXXXXXMAGWNPYXXXXXXXXXXX 507
           GPS QQYGV+     VAR  ++PGS VQG Y            +GW+PY           
Sbjct: 201 GPSQQQYGVL-----VARPPMLPGSVVQGPYGPMVVSPTMVPFSGWSPYQAPATNPLLPS 255

Query: 506 XXXXXXXXP-IYGMQQLSSSAPAYAGPYISMPSPAGHSGFDQREHAFPERPGQPECQHYI 330
                     +YG+ QL SSA  Y GPY    S  G SG  Q+EH FPERP QPEC HY+
Sbjct: 256 STTSNVGSTQLYGITQLPSSAATYTGPYQPSGSSIGPSGASQKEHPFPERPDQPECHHYM 315

Query: 329 KTGECKFGPSCRYHHPPQWSAPNTTFVLSPMGLPLRPGAPLCSHYALNGVCKFGHSCKFN 150
           KTG+CKFGP CRYHHPP  SAP     LSP+GLPLRPGAP C+HY   GVCKFG +CKF+
Sbjct: 316 KTGDCKFGPLCRYHHPPDKSAPKANVTLSPVGLPLRPGAPPCTHYTQRGVCKFGSACKFD 375

Query: 149 HPMSTLNYSPSTSSLTDMPVAPYPVGSAMAT 57
           HPM +L+YSPS SSL DMPVAPYPVGS++ T
Sbjct: 376 HPMGSLSYSPSASSLADMPVAPYPVGSSIGT 406



 Score =  102 bits (255), Expect = 6e-20
 Identities = 49/103 (47%), Positives = 60/103 (58%)
 Frame = -3

Query: 371 FPERPGQPECQHYIKTGECKFGPSCRYHHPPQWSAPNTTFVLSPMGLPLRPGAPLCSHYA 192
           FPER GQP CQ+Y++TG CKFG SC+YHHP Q     T   L+  G PLR G   CS+Y 
Sbjct: 90  FPERVGQPVCQYYMRTGSCKFGASCKYHHPRQVPGTATPVPLNYYGYPLRVGQKECSYYV 149

Query: 191 LNGVCKFGHSCKFNHPMSTLNYSPSTSSLTDMPVAPYPVGSAM 63
             G CKFG +CKF+HP        + S +  +   P PV S M
Sbjct: 150 KTGQCKFGATCKFHHPQPAGVQVLAPSPVPPVSPLPVPVPSPM 192



 Score = 74.7 bits (182), Expect = 2e-11
 Identities = 34/100 (34%), Positives = 54/100 (54%)
 Frame = -3

Query: 374 AFPERPGQPECQHYIKTGECKFGPSCRYHHPPQWSAPNTTFVLSPMGLPLRPGAPLCSHY 195
           ++P RP + +C +Y++TG C +G  CR++HP   +A       +    P R G P+C +Y
Sbjct: 43  SYPMRPDEADCIYYLRTGFCGYGTRCRFNHPRDRAAVIGAAPRTGGEFPERVGQPVCQYY 102

Query: 194 ALNGVCKFGHSCKFNHPMSTLNYSPSTSSLTDMPVAPYPV 75
              G CKFG SCK++HP       P T++   +    YP+
Sbjct: 103 MRTGSCKFGASCKYHHPRQV----PGTATPVPLNYYGYPL 138



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 24/55 (43%), Positives = 37/55 (67%), Gaps = 4/55 (7%)
 Frame = -3

Query: 377 HAFPERPGQPECQHYIKTGECKFGPSCRYHHPP----QWSAPNTTFVLSPMGLPL 225
           + +P R GQ EC +Y+KTG+CKFG +C++HHP     Q  AP+    +SP+ +P+
Sbjct: 134 YGYPLRVGQKECSYYVKTGQCKFGATCKFHHPQPAGVQVLAPSPVPPVSPLPVPV 188


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