BLASTX nr result

ID: Bupleurum21_contig00020521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020521
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB17000.1| ribosomal protein L23 family protein [Solanum tub...   234   9e-60
ref|XP_004137193.1| PREDICTED: 50S ribosomal protein L23-like [C...   228   8e-58
emb|CAN63891.1| hypothetical protein VITISV_012657 [Vitis vinifera]   227   1e-57
ref|XP_002270942.2| PREDICTED: uncharacterized protein LOC100245...   226   3e-57
ref|XP_003552058.1| PREDICTED: uncharacterized protein LOC100800...   213   3e-53

>gb|ABB17000.1| ribosomal protein L23 family protein [Solanum tuberosum]
          Length = 188

 Score =  234 bits (598), Expect = 9e-60
 Identities = 127/185 (68%), Positives = 139/185 (75%), Gaps = 4/185 (2%)
 Frame = +2

Query: 104 MGSRLGRRVVNFANLPIKLLMPSSFSNITEIALKTIPSASKIEIKRVLESLYGFEVEKVQ 283
           MGSRLGRRVVNFANLPIKLLMPSSFSNITEI+LKTIPSASKIEIKRVLESLYGFEVEKVQ
Sbjct: 1   MGSRLGRRVVNFANLPIKLLMPSSFSNITEISLKTIPSASKIEIKRVLESLYGFEVEKVQ 60

Query: 284 TLNMDGKKKKRGGVVIAKPDYKKAYVTLRNPLSISPDLFPIRVIEDDKKSLNKQSKSSFV 463
           TLNMDGKKKKRGG++IAKPDYKKAYVTLRNPLSISPDLFPI VI+++KK+++K+SKSS V
Sbjct: 61  TLNMDGKKKKRGGLLIAKPDYKKAYVTLRNPLSISPDLFPIGVIQEEKKNMSKKSKSSIV 120

Query: 464 EGDDAKKKSHWL----EGNGKPETSXXXXXXXXXXXXXSKDXXXXXXXXXXXXXXVKFPW 631
           E DD  KK HWL    +G  + E                                 KFPW
Sbjct: 121 E-DDEPKKMHWLDEKKDGRNRSEMRFGRGRDHRSGQRSDVGRDRGGEHRDVGAAAAKFPW 179

Query: 632 SSMRS 646
           SSMRS
Sbjct: 180 SSMRS 184


>ref|XP_004137193.1| PREDICTED: 50S ribosomal protein L23-like [Cucumis sativus]
           gi|449483270|ref|XP_004156540.1| PREDICTED: 50S
           ribosomal protein L23-like isoform 1 [Cucumis sativus]
           gi|449483272|ref|XP_004156541.1| PREDICTED: 50S
           ribosomal protein L23-like isoform 2 [Cucumis sativus]
          Length = 174

 Score =  228 bits (581), Expect = 8e-58
 Identities = 121/181 (66%), Positives = 137/181 (75%)
 Frame = +2

Query: 104 MGSRLGRRVVNFANLPIKLLMPSSFSNITEIALKTIPSASKIEIKRVLESLYGFEVEKVQ 283
           MGSRLGRRVV+FANLPIKLLMP+SF+NITEIALKTIPSASKIEIKRVLESLYGFEV+KVQ
Sbjct: 1   MGSRLGRRVVHFANLPIKLLMPTSFTNITEIALKTIPSASKIEIKRVLESLYGFEVDKVQ 60

Query: 284 TLNMDGKKKKRGGVVIAKPDYKKAYVTLRNPLSISPDLFPIRVIEDDKKSLNKQSKSSFV 463
           TLNM+GKKKKRGG++IAKPDYKKAYVTLRNPLSISPD++PIR+IE+DK+++NKQSKSS V
Sbjct: 61  TLNMEGKKKKRGGILIAKPDYKKAYVTLRNPLSISPDMYPIRIIEEDKRNMNKQSKSSIV 120

Query: 464 EGDDAKKKSHWLEGNGKPETSXXXXXXXXXXXXXSKDXXXXXXXXXXXXXXVKFPWSSMR 643
           E  +AKK  HWL                       +                KFPWSSMR
Sbjct: 121 EEGEAKK--HWLH-------EKEPVGIKTYKGFADRGRRRSGGGAETVEPSTKFPWSSMR 171

Query: 644 S 646
           S
Sbjct: 172 S 172


>emb|CAN63891.1| hypothetical protein VITISV_012657 [Vitis vinifera]
          Length = 480

 Score =  227 bits (579), Expect = 1e-57
 Identities = 122/192 (63%), Positives = 143/192 (74%), Gaps = 4/192 (2%)
 Frame = +2

Query: 86  QAKPRRMGSRLGRRVVNFANLPIKLLMPSSFSNITEIALKTIPSASKIEIKRVLESLYGF 265
           Q +  +MGSRLGRRV+NF NLPIKLLMPSSF+NI EIALKT+PSASKIEIKRVLESLYGF
Sbjct: 304 QNEGSKMGSRLGRRVINFTNLPIKLLMPSSFTNIKEIALKTVPSASKIEIKRVLESLYGF 363

Query: 266 EVEKVQTLNMDGKKKKRGGVVIAKPDYKKAYVTLRNPLSISPDLFPIRVIEDDKKSLNKQ 445
           EVEKV+TLNM+GKKKKRGG++IAKPDYKKAY+TL+NPLSISPDL+PIR+IE++KK+ NKQ
Sbjct: 364 EVEKVRTLNMEGKKKKRGGLLIAKPDYKKAYITLKNPLSISPDLYPIRLIEEEKKNTNKQ 423

Query: 446 SKSSFVEGDDAKKKSHWLEGNG----KPETSXXXXXXXXXXXXXSKDXXXXXXXXXXXXX 613
           SKSS VE  +A  KSHWL+G      +PE S             +               
Sbjct: 424 SKSSIVEEGEA--KSHWLDGKDGDRFRPEKSSAERGRGGRGGAAA--------------A 467

Query: 614 XVKFPWSSMRSS 649
             KFPWS MR+S
Sbjct: 468 AAKFPWSGMRAS 479


>ref|XP_002270942.2| PREDICTED: uncharacterized protein LOC100245960 [Vitis vinifera]
           gi|296084744|emb|CBI25888.3| unnamed protein product
           [Vitis vinifera]
          Length = 170

 Score =  226 bits (576), Expect = 3e-57
 Identities = 121/186 (65%), Positives = 140/186 (75%), Gaps = 4/186 (2%)
 Frame = +2

Query: 104 MGSRLGRRVVNFANLPIKLLMPSSFSNITEIALKTIPSASKIEIKRVLESLYGFEVEKVQ 283
           MGSRLGRRV+NF NLPIKLLMPSSF+NI EIALKT+PSASKIEIKRVLESLYGFEVEKV+
Sbjct: 1   MGSRLGRRVINFTNLPIKLLMPSSFTNIKEIALKTVPSASKIEIKRVLESLYGFEVEKVR 60

Query: 284 TLNMDGKKKKRGGVVIAKPDYKKAYVTLRNPLSISPDLFPIRVIEDDKKSLNKQSKSSFV 463
           TLNM+GKKKKRGG++IAKPDYKKAY+TL+NPLSISPDL+PIR+IE++KK+ NKQSKSS V
Sbjct: 61  TLNMEGKKKKRGGLLIAKPDYKKAYITLKNPLSISPDLYPIRLIEEEKKNTNKQSKSSIV 120

Query: 464 EGDDAKKKSHWLEGNG----KPETSXXXXXXXXXXXXXSKDXXXXXXXXXXXXXXVKFPW 631
           E  +A  KSHWL+G      +PE S             +                 KFPW
Sbjct: 121 EEGEA--KSHWLDGKDGDRFRPEKSSAERGRGGRGGAAA---------------AAKFPW 163

Query: 632 SSMRSS 649
           S MR+S
Sbjct: 164 SGMRAS 169


>ref|XP_003552058.1| PREDICTED: uncharacterized protein LOC100800404 [Glycine max]
          Length = 176

 Score =  213 bits (542), Expect = 3e-53
 Identities = 112/185 (60%), Positives = 137/185 (74%), Gaps = 2/185 (1%)
 Frame = +2

Query: 104 MGSRLGRRVVNFANLPIKLLMPSSFSNITEIALKTIPSASKIEIKRVLESLYGFEVEKVQ 283
           MGSRLGRRVV FANLPIKLLMP+SF+NI EIALKTIPSA+KIEIKRVL+SLYGF+V+KV+
Sbjct: 1   MGSRLGRRVVQFANLPIKLLMPNSFTNIHEIALKTIPSATKIEIKRVLQSLYGFDVDKVR 60

Query: 284 TLNMDGKKKKRGGVVIAKPDYKKAYVTLRNPLSISPDLFPIRVIEDDKKSLNKQSKSSFV 463
           TLNM+GKKKKRGG++IAKPDYKKAYVTL+ PLSISPDL+PIR+I++DKK +NKQ+KSS V
Sbjct: 61  TLNMEGKKKKRGGLLIAKPDYKKAYVTLKTPLSISPDLYPIRIIDEDKKRINKQAKSSLV 120

Query: 464 EGDDAKKKS--HWLEGNGKPETSXXXXXXXXXXXXXSKDXXXXXXXXXXXXXXVKFPWSS 637
           +  +A  ++  HWL    + +                +                KFPWSS
Sbjct: 121 QDHEAHTEAHHHWLHDRKEAQPPF-------------RPQKHGRLGRPEGASNAKFPWSS 167

Query: 638 MRSSS 652
           MRS+S
Sbjct: 168 MRSAS 172


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