BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020508
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAD12248.1| DCL protein [Coffea arabica]                          231   2e-58
ref|NP_001233874.1| protein DCL, chloroplastic [Solanum lycopers...   224   3e-56
ref|XP_004141259.1| PREDICTED: protein DCL, chloroplastic-like [...   220   4e-55
ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis...   219   9e-55
gb|AFK33859.1| unknown [Lotus japonicus]                              216   6e-54

>emb|CAD12248.1| DCL protein [Coffea arabica]
          Length = 224

 Score =  231 bits (589), Expect = 2e-58
 Identities = 112/179 (62%), Positives = 136/179 (75%), Gaps = 5/179 (2%)
 Frame = +2

Query: 464 RFCALKARNSN---KDSYGSELLRKPVTSPA--GGXXXXXXXXXXXXXXXXXXXXXXXXX 628
           R+ A++  +S     DS+G+ELLRKPV SPA                             
Sbjct: 46  RYAAVRTTSSEGRGSDSFGAELLRKPVVSPAVVSEGEDSVVEEDDKYRSGGEEVEAWVDW 105

Query: 629 XXQILEDTVPLVGFVRMILHSGQYKSGDRLSPEHEKTILQRLLPYHPECQKKIGSGVDYI 808
             QIL+DTVPLV FVRMILHSG+Y+SGDRLSPEHE+TIL+R+LPYHP+C+KKIGSGVDYI
Sbjct: 106 EDQILQDTVPLVNFVRMILHSGKYESGDRLSPEHERTILERVLPYHPQCEKKIGSGVDYI 165

Query: 809 TIGYHPDFESSRCLFVVQKNGDMVDFSYWKCLKGLIRKNYPLYADSFILRHFRKRRRSD 985
           TIGYHPDF+ SRCLF+V+K+G++VDFSYWKC+KGLIRKNYPLYAD+FI+RHF+K RRSD
Sbjct: 166 TIGYHPDFDRSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADTFIIRHFKKPRRSD 224


>ref|NP_001233874.1| protein DCL, chloroplastic [Solanum lycopersicum]
           gi|6014934|sp|Q42463.1|DCL_SOLLC RecName: Full=Protein
           DCL, chloroplastic; AltName: Full=Defective chloroplasts
           and leaves protein; Flags: Precursor
           gi|1305531|gb|AAC49433.1| defective chloroplasts and
           leaves; required for chloroplast development and
           palisade cell differentiation in leaves [Solanum
           lycopersicum] gi|1323698|gb|AAC49434.1| DCL [Solanum
           lycopersicum]
          Length = 224

 Score =  224 bits (571), Expect = 3e-56
 Identities = 116/193 (60%), Positives = 132/193 (68%), Gaps = 10/193 (5%)
 Frame = +2

Query: 437 LSFPSNPPLRFCALKARNSNKDSYG-----SELLRKPVTSP-----AGGXXXXXXXXXXX 586
           LSF     LR C   A  +  +  G     +ELLRKPV S      +             
Sbjct: 32  LSFSRCGGLRLCRCAAVKTGSEGGGIRSDNAELLRKPVISTELETTSESEELVKEESDDE 91

Query: 587 XXXXXXXXXXXXXXXXQILEDTVPLVGFVRMILHSGQYKSGDRLSPEHEKTILQRLLPYH 766
                           QILEDTVPLVGFVRMILHSG+Y  GDRLSP+H++TILQRLLPYH
Sbjct: 92  VGKKSGDGEGWVDWEDQILEDTVPLVGFVRMILHSGKYAIGDRLSPDHQRTILQRLLPYH 151

Query: 767 PECQKKIGSGVDYITIGYHPDFESSRCLFVVQKNGDMVDFSYWKCLKGLIRKNYPLYADS 946
           PEC KKIG GVDYIT+GYHPDFE+SRCLF+V+K+G+ VDFSYWKC+KGLIRKNYPLYADS
Sbjct: 152 PECDKKIGPGVDYITVGYHPDFENSRCLFIVRKDGETVDFSYWKCIKGLIRKNYPLYADS 211

Query: 947 FILRHFRKRRRSD 985
           FILRHFRKRRR+D
Sbjct: 212 FILRHFRKRRRND 224


>ref|XP_004141259.1| PREDICTED: protein DCL, chloroplastic-like [Cucumis sativus]
           gi|449519344|ref|XP_004166695.1| PREDICTED: protein DCL,
           chloroplastic-like [Cucumis sativus]
          Length = 225

 Score =  220 bits (561), Expect = 4e-55
 Identities = 115/194 (59%), Positives = 136/194 (70%), Gaps = 11/194 (5%)
 Frame = +2

Query: 434 ILSFPSNPPLRFC----ALKA-----RNSNKDSYGSELLRKPVTSPAGGXXXXXXXXXXX 586
           IL FP++P   F     ALK      R  +   Y S+LLRKPV   A             
Sbjct: 29  ILCFPTHPINSFHPSTRALKTGPEGIRLRSHQEYSSDLLRKPVGPSAKDLAGPSEDDDSS 88

Query: 587 XXXXXXXXXXXXXXXXQ--ILEDTVPLVGFVRMILHSGQYKSGDRLSPEHEKTILQRLLP 760
                           +  ILEDTVPLVGFVRM+LH+G+Y++GDRL PEHEKTIL+RLLP
Sbjct: 89  EESGNEDEEEVEWVDWEDKILEDTVPLVGFVRMVLHTGKYENGDRLRPEHEKTILERLLP 148

Query: 761 YHPECQKKIGSGVDYITIGYHPDFESSRCLFVVQKNGDMVDFSYWKCLKGLIRKNYPLYA 940
           YHPE +KKIG GVDYIT+GYHPDFESSRCLF+V+K+G+MVDFSYWKC+KGLIRKNYPLYA
Sbjct: 149 YHPESEKKIGCGVDYITVGYHPDFESSRCLFIVRKDGEMVDFSYWKCIKGLIRKNYPLYA 208

Query: 941 DSFILRHFRKRRRS 982
           +SFILRHFR+RRR+
Sbjct: 209 ESFILRHFRRRRRN 222


>ref|XP_002282478.1| PREDICTED: protein DCL, chloroplastic [Vitis vinifera]
           gi|147773590|emb|CAN69898.1| hypothetical protein
           VITISV_032063 [Vitis vinifera]
          Length = 205

 Score =  219 bits (558), Expect = 9e-55
 Identities = 113/190 (59%), Positives = 138/190 (72%), Gaps = 10/190 (5%)
 Frame = +2

Query: 446 PSNPPLRFC--------ALK-ARNSNKDSYGSELLRKP-VTSPAGGXXXXXXXXXXXXXX 595
           PS+P L F         ALK A + +++ YG +LLRKP V++P                 
Sbjct: 25  PSHPILHFATHRTPSVPALKTASDGSQEVYGPDLLRKPHVSAP---------DDEGDRKR 75

Query: 596 XXXXXXXXXXXXXQILEDTVPLVGFVRMILHSGQYKSGDRLSPEHEKTILQRLLPYHPEC 775
                        QILEDTVPLVGFVRMILHSG+Y+SG+RLSPEHEK IL+RLLPYHP  
Sbjct: 76  TKRKGGEWVDWEDQILEDTVPLVGFVRMILHSGKYRSGERLSPEHEKIILERLLPYHPGY 135

Query: 776 QKKIGSGVDYITIGYHPDFESSRCLFVVQKNGDMVDFSYWKCLKGLIRKNYPLYADSFIL 955
           ++KIGSG+DYIT+GYHP+FESSRCLF+V+K+G++VDFSYWKC+KG IRKNYPLYADSFIL
Sbjct: 136 ERKIGSGIDYITVGYHPEFESSRCLFIVRKDGELVDFSYWKCIKGFIRKNYPLYADSFIL 195

Query: 956 RHFRKRRRSD 985
           RHFR+ RRS+
Sbjct: 196 RHFRQHRRSE 205


>gb|AFK33859.1| unknown [Lotus japonicus]
          Length = 224

 Score =  216 bits (551), Expect = 6e-54
 Identities = 107/176 (60%), Positives = 124/176 (70%), Gaps = 3/176 (1%)
 Frame = +2

Query: 464 RFCALKARNSNKDSYGSELLRKPVTSPA---GGXXXXXXXXXXXXXXXXXXXXXXXXXXX 634
           R  ALKA  +        LLRKP+ +P     G                           
Sbjct: 48  RLSALKAAAAASSDAADNLLRKPLITPRKDPAGVLEEHGYAYEEEDDEEEEEDKWVDWED 107

Query: 635 QILEDTVPLVGFVRMILHSGQYKSGDRLSPEHEKTILQRLLPYHPECQKKIGSGVDYITI 814
           QILEDTVPLVGFVR ILHSG Y+SGDRLSPEHEKTIL++LLP+HPE +KKIG G+DYITI
Sbjct: 108 QILEDTVPLVGFVRTILHSGHYESGDRLSPEHEKTILEKLLPFHPESEKKIGCGIDYITI 167

Query: 815 GYHPDFESSRCLFVVQKNGDMVDFSYWKCLKGLIRKNYPLYADSFILRHFRKRRRS 982
           GYHP F+ SRCLF+V+K+G++VDFSYWKC+KGLIRKNYPLYADSFILRHFRKR R+
Sbjct: 168 GYHPQFDRSRCLFIVRKDGELVDFSYWKCIKGLIRKNYPLYADSFILRHFRKRSRN 223