BLASTX nr result

ID: Bupleurum21_contig00020506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020506
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI20540.3| unnamed protein product [Vitis vinifera]              155   3e-36
ref|XP_002273767.1| PREDICTED: peroxisome biogenesis protein 1-l...   155   3e-36
ref|XP_003529444.1| PREDICTED: peroxisome biogenesis protein 1-l...   147   2e-33
ref|XP_002871329.1| peroxisome biogenesis protein PEX1 [Arabidop...   131   7e-29
gb|AAG44817.1| peroxisome biogenesis protein PEX1 [Arabidopsis t...   130   2e-28

>emb|CBI20540.3| unnamed protein product [Vitis vinifera]
          Length = 1114

 Score =  155 bits (393), Expect = 3e-36
 Identities = 86/142 (60%), Positives = 104/142 (73%), Gaps = 1/142 (0%)
 Frame = +3

Query: 147 MEVKVRVVAGIESCFVSLPLFLIQSLESTRSDSVPLPPCLALELRDADH-LWHVXXXXXX 323
           ME+ VR V GIESCFVSLPL LIQ+L+ST S    LPP LALELR +++ +W V      
Sbjct: 1   MELAVRTVGGIESCFVSLPLPLIQTLQSTSSGL--LPPVLALELRSSNNDVWVVAWSGSA 58

Query: 324 XXXXDIEIAQQYAQCIGMXXXXXXXNQTSVQVRAVPNLPKATYVTIEPHTEDDWEVLELN 503
                IE+A+Q+A+CI +       + T+VQVRAV NLPKAT VTIEPHTEDDWEVLELN
Sbjct: 59  STSSSIEVARQFAECISLP------DHTAVQVRAVANLPKATLVTIEPHTEDDWEVLELN 112

Query: 504 AEIAEASILTQVGLVHQGMRFP 569
           AE AEA+IL Q+G+VH+ MRFP
Sbjct: 113 AEHAEAAILKQIGIVHEAMRFP 134


>ref|XP_002273767.1| PREDICTED: peroxisome biogenesis protein 1-like [Vitis vinifera]
          Length = 1134

 Score =  155 bits (393), Expect = 3e-36
 Identities = 86/142 (60%), Positives = 104/142 (73%), Gaps = 1/142 (0%)
 Frame = +3

Query: 147 MEVKVRVVAGIESCFVSLPLFLIQSLESTRSDSVPLPPCLALELRDADH-LWHVXXXXXX 323
           ME+ VR V GIESCFVSLPL LIQ+L+ST S    LPP LALELR +++ +W V      
Sbjct: 1   MELAVRTVGGIESCFVSLPLPLIQTLQSTSSGL--LPPVLALELRSSNNDVWVVAWSGSA 58

Query: 324 XXXXDIEIAQQYAQCIGMXXXXXXXNQTSVQVRAVPNLPKATYVTIEPHTEDDWEVLELN 503
                IE+A+Q+A+CI +       + T+VQVRAV NLPKAT VTIEPHTEDDWEVLELN
Sbjct: 59  STSSSIEVARQFAECISLP------DHTAVQVRAVANLPKATLVTIEPHTEDDWEVLELN 112

Query: 504 AEIAEASILTQVGLVHQGMRFP 569
           AE AEA+IL Q+G+VH+ MRFP
Sbjct: 113 AEHAEAAILKQIGIVHEAMRFP 134


>ref|XP_003529444.1| PREDICTED: peroxisome biogenesis protein 1-like [Glycine max]
          Length = 1130

 Score =  147 bits (370), Expect = 2e-33
 Identities = 80/145 (55%), Positives = 101/145 (69%), Gaps = 4/145 (2%)
 Frame = +3

Query: 147 MEVKVRVVAGIESCFVSLPLFLIQSLESTRSDSVPLPPCLALELRDADH---LWHVXXXX 317
           ME++V+VV GI+SCFVSLPL LIQ+L+STRS   P+P  LALELR   H    W V    
Sbjct: 1   MELEVQVVGGIDSCFVSLPLSLIQTLQSTRSS--PIPQILALELRSPTHPPHTWFVAWSG 58

Query: 318 XXXXXXD-IEIAQQYAQCIGMXXXXXXXNQTSVQVRAVPNLPKATYVTIEPHTEDDWEVL 494
                   IE++ Q+A+C+ +       N  +VQVRA PN+P A+ VTIEPHTEDDWE+L
Sbjct: 59  ATSSSSSAIEVSPQFAECVSLP------NHATVQVRAAPNVPHASLVTIEPHTEDDWEIL 112

Query: 495 ELNAEIAEASILTQVGLVHQGMRFP 569
           ELNA+ AEA IL+QV +VH+GMRFP
Sbjct: 113 ELNADQAEAQILSQVRIVHEGMRFP 137


>ref|XP_002871329.1| peroxisome biogenesis protein PEX1 [Arabidopsis lyrata subsp.
           lyrata] gi|297317166|gb|EFH47588.1| peroxisome
           biogenesis protein PEX1 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1122

 Score =  131 bits (330), Expect = 7e-29
 Identities = 72/142 (50%), Positives = 94/142 (66%)
 Frame = +3

Query: 144 EMEVKVRVVAGIESCFVSLPLFLIQSLESTRSDSVPLPPCLALELRDADHLWHVXXXXXX 323
           E E  V  VAG++ CFVSLP  L+ +L+ST S   PLPP L +ELR  D  W V      
Sbjct: 2   ETEAVVSTVAGVD-CFVSLPRQLLHALQSTSSS--PLPPLLPVELRSGDRRWSVAWSGSS 58

Query: 324 XXXXDIEIAQQYAQCIGMXXXXXXXNQTSVQVRAVPNLPKATYVTIEPHTEDDWEVLELN 503
                IE+A+ +A+ I +       + T VQVR +PN+PKAT VT+EP TEDDWEVLELN
Sbjct: 59  SSSSAIEVARVFAETISLP------DATVVQVRVLPNVPKATLVTVEPETEDDWEVLELN 112

Query: 504 AEIAEASILTQVGLVHQGMRFP 569
           AE+AEA+IL+QV ++H+ M+FP
Sbjct: 113 AELAEAAILSQVRILHETMKFP 134


>gb|AAG44817.1| peroxisome biogenesis protein PEX1 [Arabidopsis thaliana]
          Length = 1119

 Score =  130 bits (327), Expect = 2e-28
 Identities = 72/142 (50%), Positives = 94/142 (66%)
 Frame = +3

Query: 144 EMEVKVRVVAGIESCFVSLPLFLIQSLESTRSDSVPLPPCLALELRDADHLWHVXXXXXX 323
           E E  V  VAG++ CFVSLP  L+ +L+ST S   PLPP L +ELR  D  W V      
Sbjct: 4   ETEAVVNTVAGVD-CFVSLPRQLLHALQSTSSS--PLPPLLPVELRSGDRRWSVAWSGSS 60

Query: 324 XXXXDIEIAQQYAQCIGMXXXXXXXNQTSVQVRAVPNLPKATYVTIEPHTEDDWEVLELN 503
                IEIA+ +A+ I +       + T V+VR +PN+PKAT VT+EP TEDDWEVLELN
Sbjct: 61  SSSSAIEIARVFAESISLP------DGTVVKVRVLPNVPKATLVTVEPETEDDWEVLELN 114

Query: 504 AEIAEASILTQVGLVHQGMRFP 569
           AE+AEA+IL+QV ++H+ M+FP
Sbjct: 115 AELAEAAILSQVRILHETMKFP 136


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