BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020505
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC33226.1| putative non-LTR retroelement reverse transcripta...    74   3e-16
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]                 72   1e-15
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    72   4e-15
emb|CAB72467.1| putative protein [Arabidopsis thaliana]                74   4e-15
emb|CAB10226.1| reverse transcriptase like protein [Arabidopsis ...    74   4e-15

>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1529

 Score = 73.9 bits (180), Expect(2) = 3e-16
 Identities = 35/68 (51%), Positives = 44/68 (64%)
 Frame = -1

Query: 278  RCTLKLDILKAFDSLSWVFLFQVLDKMKFPHLFVSWIIKQCITSTMFSIKVNGSLEVFFA 99
            RC +K+DI KAFDS+ W FL   L+ + FP  F  W IK CI++  FS++VNG L  FF 
Sbjct: 890  RCAMKIDISKAFDSVQWQFLLNTLEALNFPETFRHW-IKLCISTATFSVQVNGELAGFFG 948

Query: 98   GSSGLWQG 75
             S GL QG
Sbjct: 949  SSRGLRQG 956



 Score = 35.8 bits (81), Expect(2) = 3e-16
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = -3

Query: 78   GDPLSPYLFVLVMEVLSHMIDKS 10
            G  LSPYLFV+ M VLSHMID++
Sbjct: 956  GCALSPYLFVICMNVLSHMIDEA 978


>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
          Length = 740

 Score = 72.4 bits (176), Expect(2) = 1e-15
 Identities = 34/68 (50%), Positives = 43/68 (63%)
 Frame = -1

Query: 278 RCTLKLDILKAFDSLSWVFLFQVLDKMKFPHLFVSWIIKQCITSTMFSIKVNGSLEVFFA 99
           RC +K+DI KAFDS+ W FL   L+ + FP  F  W IK CI++  FS++VNG L  FF 
Sbjct: 166 RCAMKIDISKAFDSVQWQFLLNTLEALNFPENFCHW-IKLCISTATFSVQVNGELAGFFG 224

Query: 98  GSSGLWQG 75
              GL QG
Sbjct: 225 SKRGLRQG 232



 Score = 35.0 bits (79), Expect(2) = 1e-15
 Identities = 16/21 (76%), Positives = 17/21 (80%)
 Frame = -3

Query: 78  GDPLSPYLFVLVMEVLSHMID 16
           G  LSPYLFV+ M VLSHMID
Sbjct: 232 GCALSPYLFVICMNVLSHMID 252


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 72.4 bits (176), Expect(2) = 4e-15
 Identities = 38/68 (55%), Positives = 46/68 (67%)
 Frame = -1

Query: 278 RCTLKLDILKAFDSLSWVFLFQVLDKMKFPHLFVSWIIKQCITSTMFSIKVNGSLEVFFA 99
           R  LK+D+ KAFDS+ W F+ + L     P  FV+WI KQCITST FSI V+GSL  +F 
Sbjct: 586 RGVLKVDLRKAFDSVGWGFIIETLKAANAPPRFVNWI-KQCITSTSFSINVSGSLCGYFK 644

Query: 98  GSSGLWQG 75
           GS GL QG
Sbjct: 645 GSKGLRQG 652



 Score = 33.5 bits (75), Expect(2) = 4e-15
 Identities = 13/21 (61%), Positives = 18/21 (85%)
 Frame = -3

Query: 78  GDPLSPYLFVLVMEVLSHMID 16
           GDPLSP LFV+ ME+LS +++
Sbjct: 652 GDPLSPSLFVIAMEILSRLLE 672


>emb|CAB72467.1| putative protein [Arabidopsis thaliana]
          Length = 762

 Score = 73.6 bits (179), Expect(2) = 4e-15
 Identities = 35/68 (51%), Positives = 44/68 (64%)
 Frame = -1

Query: 278 RCTLKLDILKAFDSLSWVFLFQVLDKMKFPHLFVSWIIKQCITSTMFSIKVNGSLEVFFA 99
           RC +K+DI KA DS+ W FL   L  M FP +F+ W I+ CIT+  FS++VNG L  FF 
Sbjct: 146 RCAIKIDISKASDSVQWSFLINTLTAMHFPEMFIHW-IRLCITTPSFSVQVNGELAGFFQ 204

Query: 98  GSSGLWQG 75
            S GL QG
Sbjct: 205 SSRGLRQG 212



 Score = 32.3 bits (72), Expect(2) = 4e-15
 Identities = 14/22 (63%), Positives = 18/22 (81%)
 Frame = -3

Query: 78  GDPLSPYLFVLVMEVLSHMIDK 13
           G  LSPYLFV+ M+VLS ++DK
Sbjct: 212 GCALSPYLFVICMDVLSKLLDK 233


>emb|CAB10226.1| reverse transcriptase like protein [Arabidopsis thaliana]
           gi|7268153|emb|CAB78489.1| reverse transcriptase like
           protein [Arabidopsis thaliana]
          Length = 318

 Score = 73.6 bits (179), Expect(2) = 4e-15
 Identities = 35/68 (51%), Positives = 46/68 (67%)
 Frame = -1

Query: 278 RCTLKLDILKAFDSLSWVFLFQVLDKMKFPHLFVSWIIKQCITSTMFSIKVNGSLEVFFA 99
           RC +K+DI KAFDS+ W FL  VL  + FP +FV WI+  C+T+  FS++VNG L  +F 
Sbjct: 29  RCAIKIDISKAFDSVQWTFLKNVLLTLDFPQVFVHWIM-LCVTTASFSVQVNGELAGYFN 87

Query: 98  GSSGLWQG 75
            S GL QG
Sbjct: 88  SSRGLRQG 95



 Score = 32.3 bits (72), Expect(2) = 4e-15
 Identities = 14/23 (60%), Positives = 19/23 (82%)
 Frame = -3

Query: 78  GDPLSPYLFVLVMEVLSHMIDKS 10
           G  LSPYLFV+VM+VLS  +D++
Sbjct: 95  GCSLSPYLFVIVMDVLSKKLDRA 117