BLASTX nr result

ID: Bupleurum21_contig00020504 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020504
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002307012.1| predicted protein [Populus trichocarpa] gi|2...   145   4e-33
ref|XP_002301888.1| predicted protein [Populus trichocarpa] gi|2...   144   6e-33
emb|CBI40793.3| unnamed protein product [Vitis vinifera]              141   5e-32
ref|XP_002277140.1| PREDICTED: uncharacterized protein LOC100263...   141   5e-32
emb|CAN67637.1| hypothetical protein VITISV_044256 [Vitis vinifera]   139   2e-31

>ref|XP_002307012.1| predicted protein [Populus trichocarpa] gi|222856461|gb|EEE94008.1|
           predicted protein [Populus trichocarpa]
          Length = 237

 Score =  145 bits (365), Expect = 4e-33
 Identities = 77/144 (53%), Positives = 93/144 (64%)
 Frame = -3

Query: 463 MVDLGSQRGPIVLHIMDTATSVDCSRDVRFRKTFRSLIECMVPACCTFHXXXXXXXXXXX 284
           M+DLG+QRG  ++ IMDT TSVDC R+VRFR++FRSL+ECMVPACC F            
Sbjct: 4   MIDLGNQRG--MVPIMDTPTSVDCGREVRFRRSFRSLVECMVPACCGFQASADSLASDTD 61

Query: 283 XXXXXXXXXXXXXXXXXXXXXXXXTGTFFGFRKGRVSFCFQDDTKSSPLLLLELGIPTSF 104
                                    GTFFG+RKGRVSFC QDDT+SSPLLLLE  +PT++
Sbjct: 62  ERYTSSSPSITTTTVT---------GTFFGYRKGRVSFCLQDDTRSSPLLLLEFAVPTAY 112

Query: 103 LAKQMQYGLLRIALVECEGRQSSS 32
           LAK+MQ+GLLRIAL  C  RQ+ S
Sbjct: 113 LAKEMQHGLLRIALECCHPRQNDS 136


>ref|XP_002301888.1| predicted protein [Populus trichocarpa] gi|222843614|gb|EEE81161.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  144 bits (364), Expect = 6e-33
 Identities = 77/144 (53%), Positives = 93/144 (64%)
 Frame = -3

Query: 463 MVDLGSQRGPIVLHIMDTATSVDCSRDVRFRKTFRSLIECMVPACCTFHXXXXXXXXXXX 284
           M+DLG+QRG  ++ IMDT TSVDC R+VRFRK+FRSL+ECMVPACC F            
Sbjct: 4   MIDLGTQRG--MVPIMDTPTSVDCGREVRFRKSFRSLVECMVPACCGFQASADSLASDTD 61

Query: 283 XXXXXXXXXXXXXXXXXXXXXXXXTGTFFGFRKGRVSFCFQDDTKSSPLLLLELGIPTSF 104
                                    GTFFG+RKGRVSFC QDDT+SSPL+LLE  +PT++
Sbjct: 62  DYYTSSSASTTTTTTVT--------GTFFGYRKGRVSFCLQDDTRSSPLILLEFAVPTAY 113

Query: 103 LAKQMQYGLLRIALVECEGRQSSS 32
           LAK+MQ+GLLRIAL  C  RQ +S
Sbjct: 114 LAKEMQHGLLRIALECCHPRQINS 137


>emb|CBI40793.3| unnamed protein product [Vitis vinifera]
          Length = 221

 Score =  141 bits (356), Expect = 5e-32
 Identities = 76/144 (52%), Positives = 95/144 (65%)
 Frame = -3

Query: 463 MVDLGSQRGPIVLHIMDTATSVDCSRDVRFRKTFRSLIECMVPACCTFHXXXXXXXXXXX 284
           M+DLG+QRGP  LHIMDT TSV+C R+VRFR++FRSL+ECMVP CC F            
Sbjct: 1   MIDLGNQRGP--LHIMDTPTSVECGREVRFRRSFRSLVECMVP-CCGFQPSDSISSDTES 57

Query: 283 XXXXXXXXXXXXXXXXXXXXXXXXTGTFFGFRKGRVSFCFQDDTKSSPLLLLELGIPTSF 104
                                    GTFFG+RKGRVSFC QDDT+S+PLLLLE  +PT++
Sbjct: 58  THASTVT------------------GTFFGYRKGRVSFCLQDDTRSTPLLLLEFAVPTAY 99

Query: 103 LAKQMQYGLLRIALVECEGRQSSS 32
           LA++MQYGLLRIAL EC+ ++ +S
Sbjct: 100 LAREMQYGLLRIAL-ECDRQKQAS 122


>ref|XP_002277140.1| PREDICTED: uncharacterized protein LOC100263245 [Vitis vinifera]
          Length = 223

 Score =  141 bits (356), Expect = 5e-32
 Identities = 76/144 (52%), Positives = 95/144 (65%)
 Frame = -3

Query: 463 MVDLGSQRGPIVLHIMDTATSVDCSRDVRFRKTFRSLIECMVPACCTFHXXXXXXXXXXX 284
           M+DLG+QRGP  LHIMDT TSV+C R+VRFR++FRSL+ECMVP CC F            
Sbjct: 3   MIDLGNQRGP--LHIMDTPTSVECGREVRFRRSFRSLVECMVP-CCGFQPSDSISSDTES 59

Query: 283 XXXXXXXXXXXXXXXXXXXXXXXXTGTFFGFRKGRVSFCFQDDTKSSPLLLLELGIPTSF 104
                                    GTFFG+RKGRVSFC QDDT+S+PLLLLE  +PT++
Sbjct: 60  THASTVT------------------GTFFGYRKGRVSFCLQDDTRSTPLLLLEFAVPTAY 101

Query: 103 LAKQMQYGLLRIALVECEGRQSSS 32
           LA++MQYGLLRIAL EC+ ++ +S
Sbjct: 102 LAREMQYGLLRIAL-ECDRQKQAS 124


>emb|CAN67637.1| hypothetical protein VITISV_044256 [Vitis vinifera]
          Length = 223

 Score =  139 bits (351), Expect = 2e-31
 Identities = 76/144 (52%), Positives = 94/144 (65%)
 Frame = -3

Query: 463 MVDLGSQRGPIVLHIMDTATSVDCSRDVRFRKTFRSLIECMVPACCTFHXXXXXXXXXXX 284
           M+DLG+QRGP  LHIMDT TSV+C R+VRFR++FRSL+ECMVP CC F            
Sbjct: 3   MIDLGNQRGP--LHIMDTPTSVECGREVRFRRSFRSLVECMVP-CCGFQPSDSISSDTES 59

Query: 283 XXXXXXXXXXXXXXXXXXXXXXXXTGTFFGFRKGRVSFCFQDDTKSSPLLLLELGIPTSF 104
                                    GTFFG+RKGRVSFC QDDT+S+PLLLLE  +PT+ 
Sbjct: 60  THASTVT------------------GTFFGYRKGRVSFCLQDDTRSTPLLLLEFAVPTAC 101

Query: 103 LAKQMQYGLLRIALVECEGRQSSS 32
           LA++MQYGLLRIAL EC+ ++ +S
Sbjct: 102 LAREMQYGLLRIAL-ECDRQKQAS 124


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