BLASTX nr result

ID: Bupleurum21_contig00020502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020502
         (360 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36982.1| unknown [Medicago truncatula]                           72   6e-11
ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago trunc...    72   6e-11
ref|XP_002521998.1| ubiquitin-protein ligase, putative [Ricinus ...    71   8e-11
emb|CAN82914.1| hypothetical protein VITISV_031085 [Vitis vinifera]    70   2e-10
ref|XP_002522000.1| ubiquitin-protein ligase, putative [Ricinus ...    68   7e-10

>gb|AFK36982.1| unknown [Medicago truncatula]
          Length = 418

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/64 (56%), Positives = 45/64 (70%)
 Frame = -3

Query: 196 MTSDAKRRHNGTAVDRISSLPRNLIDLILQCLPVRDAARTSILSRTWRDMWGTLPQLVFN 17
           MT   K+ + G  +DRIS LP N+ID ILQ L +RD ARTSILSR WRD+W + P L F+
Sbjct: 1   MTLSNKKANYGDHLDRISDLPSNVIDGILQHLNIRDLARTSILSRKWRDIWISFPWLEFD 60

Query: 16  DEFF 5
            +FF
Sbjct: 61  KDFF 64


>ref|XP_003613588.1| F-box/FBD/LRR-repeat protein [Medicago truncatula]
           gi|355514923|gb|AES96546.1| F-box/FBD/LRR-repeat protein
           [Medicago truncatula]
          Length = 499

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 36/64 (56%), Positives = 45/64 (70%)
 Frame = -3

Query: 196 MTSDAKRRHNGTAVDRISSLPRNLIDLILQCLPVRDAARTSILSRTWRDMWGTLPQLVFN 17
           MT   K+ + G  +DRIS LP N+ID ILQ L +RD ARTSILSR WRD+W + P L F+
Sbjct: 82  MTLSNKKANYGDHLDRISDLPSNVIDGILQHLNIRDLARTSILSRKWRDIWISFPWLEFD 141

Query: 16  DEFF 5
            +FF
Sbjct: 142 KDFF 145


>ref|XP_002521998.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223538802|gb|EEF40402.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 437

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 29/54 (53%), Positives = 42/54 (77%)
 Frame = -3

Query: 166 GTAVDRISSLPRNLIDLILQCLPVRDAARTSILSRTWRDMWGTLPQLVFNDEFF 5
           G+ +DRIS LP N+ID IL CLP++DA RTS LS+ W++ W T+PQ++ ++ FF
Sbjct: 7   GSGLDRISDLPSNVIDHILACLPLKDAVRTSTLSKKWKEKWHTVPQIIVDENFF 60


>emb|CAN82914.1| hypothetical protein VITISV_031085 [Vitis vinifera]
          Length = 341

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 35/51 (68%), Positives = 37/51 (72%)
 Frame = -3

Query: 160 AVDRISSLPRNLIDLILQCLPVRDAARTSILSRTWRDMWGTLPQLVFNDEF 8
           A DRIS LP N+ID IL  LP+ DA RTSILSR WR  W TLPQLVF D F
Sbjct: 7   AADRISXLPSNIIDBILVRLPIHDAVRTSILSRKWRYKWLTLPQLVFEDSF 57


>ref|XP_002522000.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223538804|gb|EEF40404.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 429

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 30/59 (50%), Positives = 42/59 (71%)
 Frame = -3

Query: 181 KRRHNGTAVDRISSLPRNLIDLILQCLPVRDAARTSILSRTWRDMWGTLPQLVFNDEFF 5
           +R + G+ +DRIS LP N+ID IL CLP +DA RTS LS+ W++ W  +PQ+V +  FF
Sbjct: 2   ERIYVGSGLDRISDLPSNVIDHILACLPFKDAVRTSTLSKKWKEKWHMVPQIVVDKNFF 60


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