BLASTX nr result

ID: Bupleurum21_contig00020493 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020493
         (430 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83005.1| hypothetical protein VITISV_003699 [Vitis vinifera]   130   1e-28
ref|XP_002282069.1| PREDICTED: uncharacterized protein LOC100247...   127   9e-28
ref|XP_002312600.1| predicted protein [Populus trichocarpa] gi|2...   118   4e-25
ref|XP_003535450.1| PREDICTED: uncharacterized protein LOC100802...   115   3e-24
ref|XP_002315586.1| predicted protein [Populus trichocarpa] gi|2...   114   8e-24

>emb|CAN83005.1| hypothetical protein VITISV_003699 [Vitis vinifera]
          Length = 597

 Score =  130 bits (326), Expect = 1e-28
 Identities = 67/139 (48%), Positives = 89/139 (64%), Gaps = 1/139 (0%)
 Frame = +3

Query: 15  DHIFGYEPTHKRLXXXXXXXXXXXXXXXXPA-ALVSQGMLHCSWSNGLPHYVFSIDDQRE 191
           +HI+G E  HKRL                   A VSQGML C+W  G+PH+VFS+DDQRE
Sbjct: 200 NHIYGPEAVHKRLISTSSTNSTCSDQSPSSGFATVSQGMLQCTWKGGIPHFVFSVDDQRE 259

Query: 192 TYIANMLKAESSVNKVLDYMYIFHSRTGGKKEDVIHAKELNPVGKMKVTTSYTLLQDNAE 371
            Y+AN  KAE   +K LD MY+FHSRTGG+KE  I   + + VGKMKV++S+TL  ++++
Sbjct: 260 VYVANQWKAELPDDKALDCMYLFHSRTGGQKEHKIPDNKADLVGKMKVSSSFTLCPNDSK 319

Query: 372 IKETHFVLFGIDDDCAREM 428
           I ET FV FG  ++ A +M
Sbjct: 320 IMETEFVFFGGRENYASKM 338


>ref|XP_002282069.1| PREDICTED: uncharacterized protein LOC100247804 [Vitis vinifera]
           gi|296083723|emb|CBI23712.3| unnamed protein product
           [Vitis vinifera]
          Length = 642

 Score =  127 bits (319), Expect = 9e-28
 Identities = 66/139 (47%), Positives = 88/139 (63%), Gaps = 1/139 (0%)
 Frame = +3

Query: 15  DHIFGYEPTHKRLXXXXXXXXXXXXXXXXPA-ALVSQGMLHCSWSNGLPHYVFSIDDQRE 191
           +H +G E  HKRL                   A VSQGML C+W  G+PH+VFS+DDQRE
Sbjct: 245 NHRYGPEAVHKRLISTSSTNSTCSDQSPSSGFATVSQGMLQCTWKGGIPHFVFSVDDQRE 304

Query: 192 TYIANMLKAESSVNKVLDYMYIFHSRTGGKKEDVIHAKELNPVGKMKVTTSYTLLQDNAE 371
            Y+AN  KAE   +K LD MY+FHSRTGG+KE  I   + + VGKMKV++S+TL  ++++
Sbjct: 305 VYVANQWKAELPDDKALDCMYLFHSRTGGQKEHKIPDNKADLVGKMKVSSSFTLCPNDSK 364

Query: 372 IKETHFVLFGIDDDCAREM 428
           I ET FV FG  ++ A +M
Sbjct: 365 IMETEFVFFGGRENYASKM 383


>ref|XP_002312600.1| predicted protein [Populus trichocarpa] gi|222852420|gb|EEE89967.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/132 (44%), Positives = 82/132 (62%), Gaps = 1/132 (0%)
 Frame = +3

Query: 18  HIFGYEPTHKRLXXXXXXXXXXXXXXXX-PAALVSQGMLHCSWSNGLPHYVFSIDDQRET 194
           H FG E  HKRL                 P+A V+QG L C+W  G PH+VFSID+Q+  
Sbjct: 211 HKFGSETLHKRLISMSSSNSTCSDQSSSSPSASVTQGTLQCTWKGGNPHFVFSIDNQKLV 270

Query: 195 YIANMLKAESSVNKVLDYMYIFHSRTGGKKEDVIHAKELNPVGKMKVTTSYTLLQDNAEI 374
           Y+AN+   +S+ +K L+Y+Y+FHSR G +KE + H KE + VGKMKV+TS+ L   N+ I
Sbjct: 271 YVANLYNVDSADDKALEYVYLFHSRKGSQKEHMNHDKESHLVGKMKVSTSFALCPKNSRI 330

Query: 375 KETHFVLFGIDD 410
            +  FVLFG ++
Sbjct: 331 TQREFVLFGYEN 342


>ref|XP_003535450.1| PREDICTED: uncharacterized protein LOC100802721 [Glycine max]
          Length = 409

 Score =  115 bits (289), Expect = 3e-24
 Identities = 57/131 (43%), Positives = 77/131 (58%)
 Frame = +3

Query: 6   LLRDHIFGYEPTHKRLXXXXXXXXXXXXXXXXPAALVSQGMLHCSWSNGLPHYVFSIDDQ 185
           L+R H +G    HKRL                 ++ +SQGM+ CSW  G+PH+VFS DDQ
Sbjct: 235 LVRSHKYGSISVHKRLVSTSSTTSTSSDWLSSTSSTLSQGMIQCSWKQGIPHFVFSADDQ 294

Query: 186 RETYIANMLKAESSVNKVLDYMYIFHSRTGGKKEDVIHAKELNPVGKMKVTTSYTLLQDN 365
           +E Y+A + K +S+ NK LDY+Y FH   GG+K   I   +   VGKM V+TS+TL  +N
Sbjct: 295 KEVYVAKLKKVDSTDNKALDYVYEFHLNKGGQKGREIPDGDFPFVGKMHVSTSFTLCPNN 354

Query: 366 AEIKETHFVLF 398
             I+ET F LF
Sbjct: 355 CRIRETEFTLF 365


>ref|XP_002315586.1| predicted protein [Populus trichocarpa] gi|222864626|gb|EEF01757.1|
           predicted protein [Populus trichocarpa]
          Length = 615

 Score =  114 bits (285), Expect = 8e-24
 Identities = 51/107 (47%), Positives = 73/107 (68%)
 Frame = +3

Query: 108 ALVSQGMLHCSWSNGLPHYVFSIDDQRETYIANMLKAESSVNKVLDYMYIFHSRTGGKKE 287
           A V+QG L C+W  G PH++FS+DDQ+  Y+AN     S+ +K L+Y+Y+FHSR GG+KE
Sbjct: 248 AAVTQGTLQCTWKGGNPHFIFSLDDQKVVYVANFYNVNSADDKALEYVYLFHSRKGGQKE 307

Query: 288 DVIHAKELNPVGKMKVTTSYTLLQDNAEIKETHFVLFGIDDDCAREM 428
            +IH KE   VG+M V+TS++L  +N  I E  FVLFG  ++   E+
Sbjct: 308 HMIHDKESRLVGQMNVSTSFSLCPNNCRIMEREFVLFGCYENLVGEL 354


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