BLASTX nr result

ID: Bupleurum21_contig00020476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020476
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                               164   7e-39
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...   162   3e-38
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...   139   3e-31
emb|CCH50954.1| T1.2 [Malus x robusta]                                136   2e-30
emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [He...   114   1e-23

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score =  164 bits (416), Expect = 7e-39
 Identities = 83/159 (52%), Positives = 98/159 (61%)
 Frame = -3

Query: 482 EMYRRLDTKEGANAIFKLAKARERGRRDLGSVRFVKDDLGQVLVNEEAIKERWHSYFHKL 303
           +MY+RLDTKEG   I+KLA+ARE+  RDL  VR +KD+ G+VL  E A+K+RW  YFH L
Sbjct: 472 DMYKRLDTKEGELDIYKLARAREKKTRDLNQVRCIKDEDGKVLATENAVKDRWRGYFHNL 531

Query: 302 FNEXXXXXXXXXXXXXXXXXXXXXXXXXXSKEEVKGALKKMGRGKAVGPDQIPIEVWLCL 123
           FNE                           KEEV  ALKKM   KA+GPD IPIEVW  L
Sbjct: 532 FNEGHERSASLWELSNSEECRNYSFYRRIRKEEVVVALKKMKHRKAIGPDDIPIEVWKVL 591

Query: 122 GETGVQWLADLFNVLLLGAMMPTEWRRSIVVPFFKNKGD 6
           GETG+ WL DLFN +L    MP EWR S +VP +KNKGD
Sbjct: 592 GETGITWLTDLFNRILKTKKMPNEWRTSTLVPIYKNKGD 630


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score =  162 bits (411), Expect = 3e-38
 Identities = 83/159 (52%), Positives = 98/159 (61%)
 Frame = -3

Query: 482 EMYRRLDTKEGANAIFKLAKARERGRRDLGSVRFVKDDLGQVLVNEEAIKERWHSYFHKL 303
           +MY+RLDTKEG   I+KLA+ARE+  RDL  VR +KD+ G+VL  E A+K++W  YFH L
Sbjct: 76  DMYKRLDTKEGELDIYKLARAREKKTRDLNQVRCIKDEDGKVLATENAVKDKWRGYFHNL 135

Query: 302 FNEXXXXXXXXXXXXXXXXXXXXXXXXXXSKEEVKGALKKMGRGKAVGPDQIPIEVWLCL 123
           FNE                           KEEV  ALKKM   KAVGPD IPIEVW  L
Sbjct: 136 FNEGHERSASLGELSNSEECRNYSFYRRIRKEEVVVALKKMKHRKAVGPDDIPIEVWKVL 195

Query: 122 GETGVQWLADLFNVLLLGAMMPTEWRRSIVVPFFKNKGD 6
           GETG+ WL DLFN +L    MP EWR S +VP +KNKGD
Sbjct: 196 GETGITWLIDLFNRILKTKKMPNEWRTSPLVPIYKNKGD 234


>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score =  139 bits (350), Expect = 3e-31
 Identities = 72/158 (45%), Positives = 91/158 (57%)
 Frame = -3

Query: 479  MYRRLDTKEGANAIFKLAKARERGRRDLGSVRFVKDDLGQVLVNEEAIKERWHSYFHKLF 300
            +Y+ LDTKEG   I+++AK+RER  RDL  V+ +KD   +VL  EE I ERW SYF++LF
Sbjct: 872  LYQSLDTKEGEKGIYRIAKSRERRTRDLDQVKCIKDKDREVLAQEEKINERWKSYFYELF 931

Query: 299  NEXXXXXXXXXXXXXXXXXXXXXXXXXXSKEEVKGALKKMGRGKAVGPDQIPIEVWLCLG 120
            NE                             EVK ALK+M  G+AVGPD IPIEVW  LG
Sbjct: 932  NEGQKTLPSLGRLCTREEDQNFNYYRRIRDFEVKEALKQMKNGRAVGPDNIPIEVWKGLG 991

Query: 119  ETGVQWLADLFNVLLLGAMMPTEWRRSIVVPFFKNKGD 6
              G+ WL  LF  +L    MP EWR+S +VP ++ KGD
Sbjct: 992  GKGINWLTKLFYEILRSKKMPDEWRKSTLVPIYRIKGD 1029


>emb|CCH50954.1| T1.2 [Malus x robusta]
          Length = 554

 Score =  136 bits (343), Expect = 2e-30
 Identities = 76/160 (47%), Positives = 91/160 (56%), Gaps = 1/160 (0%)
 Frame = -3

Query: 482 EMYRRLDTK-EGANAIFKLAKARERGRRDLGSVRFVKDDLGQVLVNEEAIKERWHSYFHK 306
           E YRR   + + A  I+KLAK RE+  RDL  VR +KD+ G+VL  E A+K+R   YFH 
Sbjct: 94  ERYRRAKQEAKKALDIYKLAKVREKKTRDLNQVRCIKDEDGKVLATENAVKDRLRDYFHN 153

Query: 305 LFNEXXXXXXXXXXXXXXXXXXXXXXXXXXSKEEVKGALKKMGRGKAVGPDQIPIEVWLC 126
           LFNE                           KEEV  ALKKM   KAVGP+ IPI+VW  
Sbjct: 154 LFNEGHEWSTSLGELSNSEEYRNYFFYRRIRKEEVVVALKKMKHIKAVGPNDIPIKVWKV 213

Query: 125 LGETGVQWLADLFNVLLLGAMMPTEWRRSIVVPFFKNKGD 6
           LGETG+ WL DLFN +L    M  EWR S +VP +KNKGD
Sbjct: 214 LGETGITWLTDLFNRILKMKKMSNEWRNSTLVPIYKNKGD 253


>emb|CBA11992.1| endonuclease-reverse transcriptase HmRTE-e01 [Heliconius melpomene]
          Length = 990

 Score =  114 bits (285), Expect = 1e-23
 Identities = 58/157 (36%), Positives = 83/157 (52%)
 Frame = -3

Query: 479 MYRRLDTKEGANAIFKLAKARERGRRDLGSVRFVKDDLGQVLVNEEAIKERWHSYFHKLF 300
           +Y +L+T EG   I+KLA++R++  +D+     V+D  G +L N +++KERW SYF +L 
Sbjct: 422 LYDKLETVEGQKLIYKLARSRDKVTQDIAKCLCVRDSQGTLLCNHDSVKERWRSYFQELL 481

Query: 299 NEXXXXXXXXXXXXXXXXXXXXXXXXXXSKEEVKGALKKMGRGKAVGPDQIPIEVWLCLG 120
           N                             +E +  L++M  GKAVGPD IPIE W  LG
Sbjct: 482 NTQHPCSLHHDPPPNLGLIAPITL------DETRNCLRRMKNGKAVGPDDIPIEAWKSLG 535

Query: 119 ETGVQWLADLFNVLLLGAMMPTEWRRSIVVPFFKNKG 9
             GV  L DLFN +L    MP +WR S + P +K +G
Sbjct: 536 SLGVLMLTDLFNHILNTGKMPHQWRLSFITPIYKGRG 572


Top