BLASTX nr result

ID: Bupleurum21_contig00020465 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020465
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002314825.1| predicted protein [Populus trichocarpa] gi|2...    60   5e-13
ref|XP_002280212.1| PREDICTED: MATE efflux family protein 5 [Vit...    55   3e-12
emb|CBI26941.3| unnamed protein product [Vitis vinifera]               55   3e-12
ref|XP_002528061.1| TRANSPARENT TESTA 12 protein, putative [Rici...    56   6e-12
ref|XP_002312424.1| predicted protein [Populus trichocarpa] gi|2...    55   6e-12

>ref|XP_002314825.1| predicted protein [Populus trichocarpa] gi|222863865|gb|EEF00996.1|
           predicted protein [Populus trichocarpa]
          Length = 482

 Score = 60.1 bits (144), Expect(2) = 5e-13
 Identities = 30/60 (50%), Positives = 37/60 (61%)
 Frame = +3

Query: 3   TRVCNELGAGNPNSAQLATMSVMVLGAAEAIVAVSFLYC*RNVLGYAFGYEKEVKSLTTS 182
           TRV NELGAGNP +A+LA  + M L  +E I+  S L+  R V GY F  EKEV    T+
Sbjct: 318 TRVANELGAGNPRAARLAVYAAMFLAVSETIIVTSALFASRRVFGYLFSNEKEVIDYVTT 377



 Score = 38.9 bits (89), Expect(2) = 5e-13
 Identities = 16/27 (59%), Positives = 22/27 (81%)
 Frame = +2

Query: 164 QVIDYVKNMTPIICLSMILDILQAVVS 244
           +VIDYV  M P++CLS+I+D LQ V+S
Sbjct: 370 EVIDYVTTMAPLVCLSVIMDSLQGVLS 396


>ref|XP_002280212.1| PREDICTED: MATE efflux family protein 5 [Vitis vinifera]
          Length = 481

 Score = 55.1 bits (131), Expect(2) = 3e-12
 Identities = 28/60 (46%), Positives = 35/60 (58%)
 Frame = +3

Query: 3   TRVCNELGAGNPNSAQLATMSVMVLGAAEAIVAVSFLYC*RNVLGYAFGYEKEVKSLTTS 182
           TRV NELGAGNP  A+LA  ++M L   E  +  + L+  R V GY F  EKEV    T+
Sbjct: 314 TRVSNELGAGNPQKARLAVYALMFLAVTETALVSTTLFASRRVFGYLFSNEKEVVDYVTN 373



 Score = 41.2 bits (95), Expect(2) = 3e-12
 Identities = 16/27 (59%), Positives = 24/27 (88%)
 Frame = +2

Query: 164 QVIDYVKNMTPIICLSMILDILQAVVS 244
           +V+DYV NM+P++CLS+ILD +Q V+S
Sbjct: 366 EVVDYVTNMSPLVCLSVILDSMQGVLS 392


>emb|CBI26941.3| unnamed protein product [Vitis vinifera]
          Length = 443

 Score = 55.1 bits (131), Expect(2) = 3e-12
 Identities = 28/60 (46%), Positives = 35/60 (58%)
 Frame = +3

Query: 3   TRVCNELGAGNPNSAQLATMSVMVLGAAEAIVAVSFLYC*RNVLGYAFGYEKEVKSLTTS 182
           TRV NELGAGNP  A+LA  ++M L   E  +  + L+  R V GY F  EKEV    T+
Sbjct: 276 TRVSNELGAGNPQKARLAVYALMFLAVTETALVSTTLFASRRVFGYLFSNEKEVVDYVTN 335



 Score = 41.2 bits (95), Expect(2) = 3e-12
 Identities = 16/27 (59%), Positives = 24/27 (88%)
 Frame = +2

Query: 164 QVIDYVKNMTPIICLSMILDILQAVVS 244
           +V+DYV NM+P++CLS+ILD +Q V+S
Sbjct: 328 EVVDYVTNMSPLVCLSVILDSMQGVLS 354


>ref|XP_002528061.1| TRANSPARENT TESTA 12 protein, putative [Ricinus communis]
           gi|223532522|gb|EEF34311.1| TRANSPARENT TESTA 12
           protein, putative [Ricinus communis]
          Length = 470

 Score = 56.2 bits (134), Expect(2) = 6e-12
 Identities = 28/54 (51%), Positives = 37/54 (68%)
 Frame = +3

Query: 3   TRVCNELGAGNPNSAQLATMSVMVLGAAEAIVAVSFLYC*RNVLGYAFGYEKEV 164
           TRV NELGAGNP SA+LA M  + L  AEA +  + ++  R+VLGYA+   K+V
Sbjct: 314 TRVSNELGAGNPQSARLAVMVAICLAGAEAAIVSATVFFSRHVLGYAYSNNKQV 367



 Score = 38.9 bits (89), Expect(2) = 6e-12
 Identities = 18/27 (66%), Positives = 22/27 (81%)
 Frame = +2

Query: 164 QVIDYVKNMTPIICLSMILDILQAVVS 244
           QV++YV  M P+ICLS ILD LQAV+S
Sbjct: 366 QVVNYVAIMAPLICLSFILDSLQAVLS 392


>ref|XP_002312424.1| predicted protein [Populus trichocarpa] gi|222852244|gb|EEE89791.1|
           predicted protein [Populus trichocarpa]
          Length = 456

 Score = 54.7 bits (130), Expect(2) = 6e-12
 Identities = 26/54 (48%), Positives = 35/54 (64%)
 Frame = +3

Query: 3   TRVCNELGAGNPNSAQLATMSVMVLGAAEAIVAVSFLYC*RNVLGYAFGYEKEV 164
           TRV NELGAG P +A++A  SVM+L   E  V    L+  R++ GY+F  E+EV
Sbjct: 294 TRVSNELGAGRPQAARIAAYSVMILAIIELFVVSGTLFATRHIFGYSFSNEREV 347



 Score = 40.4 bits (93), Expect(2) = 6e-12
 Identities = 16/27 (59%), Positives = 23/27 (85%)
 Frame = +2

Query: 164 QVIDYVKNMTPIICLSMILDILQAVVS 244
           +V+DYV NM P++CLS+I+D LQ V+S
Sbjct: 346 EVVDYVSNMAPLVCLSVIIDGLQGVLS 372


Top