BLASTX nr result

ID: Bupleurum21_contig00020464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020464
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265190.1| PREDICTED: AP-1 complex subunit gamma-2 [Vit...    85   7e-15
ref|XP_002309097.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_002521026.1| AP-1 complex subunit gamma-2, putative [Rici...    83   3e-14
ref|XP_002323533.1| predicted protein [Populus trichocarpa] gi|2...    78   8e-13
ref|XP_002886637.1| clathrin binding protein [Arabidopsis lyrata...    76   2e-12

>ref|XP_002265190.1| PREDICTED: AP-1 complex subunit gamma-2 [Vitis vinifera]
           gi|296086533|emb|CBI32122.3| unnamed protein product
           [Vitis vinifera]
          Length = 878

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 47/90 (52%), Positives = 53/90 (58%)
 Frame = +3

Query: 3   NIRSALCERMPVLDESIFSQRRAGSLPAAVSTIQGAVPNLSNGVAKXXXXXXXXXXXXXX 182
           NIRS L ERMPVLDE+ ++ RRAGS+PA VS   GA  NL NGVAK              
Sbjct: 581 NIRSVLVERMPVLDEATYNGRRAGSMPATVSMSSGASLNLPNGVAKPPAAPLVDLLDLSS 640

Query: 183 XXXXXXXXXGNDFLHDLLGVDMSTGSSQTG 272
                    G DFLHDLLGVD+S GSS +G
Sbjct: 641 DDTPAPSSSGGDFLHDLLGVDLSVGSSLSG 670


>ref|XP_002309097.1| predicted protein [Populus trichocarpa] gi|222855073|gb|EEE92620.1|
           predicted protein [Populus trichocarpa]
          Length = 877

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 47/91 (51%), Positives = 53/91 (58%)
 Frame = +3

Query: 3   NIRSALCERMPVLDESIFSQRRAGSLPAAVSTIQGAVPNLSNGVAKXXXXXXXXXXXXXX 182
           NIRS L ERMP+LDE+ F+ RRAGSLPAAVST  GA  NL NGV K              
Sbjct: 581 NIRSTLVERMPILDEATFTTRRAGSLPAAVSTSGGASLNLPNGVVKPSTAPLVDLLDLSD 640

Query: 183 XXXXXXXXXGNDFLHDLLGVDMSTGSSQTGT 275
                    G DFL DLLGVD+S   +Q+GT
Sbjct: 641 DVPAAPGSSGGDFLQDLLGVDLSPAPTQSGT 671


>ref|XP_002521026.1| AP-1 complex subunit gamma-2, putative [Ricinus communis]
           gi|223539863|gb|EEF41443.1| AP-1 complex subunit
           gamma-2, putative [Ricinus communis]
          Length = 875

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 48/91 (52%), Positives = 55/91 (60%)
 Frame = +3

Query: 3   NIRSALCERMPVLDESIFSQRRAGSLPAAVSTIQGAVPNLSNGVAKXXXXXXXXXXXXXX 182
           +IRSAL ERMPVLDE+ FS RRAGSLP  VST  GA  N+ NGVAK              
Sbjct: 581 SIRSALVERMPVLDEATFSGRRAGSLPTTVSTSSGASLNIPNGVAK-PSAAPLVDLLDLS 639

Query: 183 XXXXXXXXXGNDFLHDLLGVDMSTGSSQTGT 275
                    G DFLHDLLGVD++ GS+Q G+
Sbjct: 640 DDAPAPSSSGGDFLHDLLGVDLAPGSTQPGS 670


>ref|XP_002323533.1| predicted protein [Populus trichocarpa] gi|222868163|gb|EEF05294.1|
           predicted protein [Populus trichocarpa]
          Length = 875

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 46/90 (51%), Positives = 52/90 (57%)
 Frame = +3

Query: 3   NIRSALCERMPVLDESIFSQRRAGSLPAAVSTIQGAVPNLSNGVAKXXXXXXXXXXXXXX 182
           NIRSAL ERMP+LD++ FS RRAGSLPAA ST  GA  NL NGV K              
Sbjct: 581 NIRSALVERMPILDDATFSTRRAGSLPAAASTSGGASLNLPNGVVK-PSAAPLVDLLDLS 639

Query: 183 XXXXXXXXXGNDFLHDLLGVDMSTGSSQTG 272
                    G DFL DLLGVD+S   +Q+G
Sbjct: 640 DDLPAPSSSGGDFLQDLLGVDLSPAPTQSG 669


>ref|XP_002886637.1| clathrin binding protein [Arabidopsis lyrata subsp. lyrata]
           gi|297332478|gb|EFH62896.1| clathrin binding protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 862

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 44/90 (48%), Positives = 53/90 (58%)
 Frame = +3

Query: 3   NIRSALCERMPVLDESIFSQRRAGSLPAAVSTIQGAVPNLSNGVAKXXXXXXXXXXXXXX 182
           NIRSAL ERMPVLDE+ FS RRAGSLPAAVST   +  ++ NGVAK              
Sbjct: 581 NIRSALVERMPVLDEATFSGRRAGSLPAAVSTSGKSPLSIPNGVAKAAPAPLVDLLDLGS 640

Query: 183 XXXXXXXXXGNDFLHDLLGVDMSTGSSQTG 272
                     N+FL DLLG+D++  S+Q G
Sbjct: 641 DDTPAPTSSSNNFLQDLLGIDLTQPSAQPG 670


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