BLASTX nr result

ID: Bupleurum21_contig00020447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020447
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACJ11713.1| UDP-L-rhamnose synthase [Gossypium hirsutum]           101   6e-20
gb|ADB24764.1| UDP-L-rhamnose synthase [Gossypium hirsutum]           100   2e-19
emb|CBI34766.3| unnamed protein product [Vitis vinifera]               95   5e-18
ref|XP_002282339.1| PREDICTED: probable rhamnose biosynthetic en...    95   5e-18
gb|AFK41450.1| unknown [Medicago truncatula]                           95   7e-18

>gb|ACJ11713.1| UDP-L-rhamnose synthase [Gossypium hirsutum]
          Length = 300

 Score =  101 bits (252), Expect = 6e-20
 Identities = 49/59 (83%), Positives = 52/59 (88%), Gaps = 3/59 (5%)
 Frame = +3

Query: 90  MGFPAN---DAPLKFLIYGRTGWIGGLLGKICESKGIDYSYGSGRLENRPSIESDIATV 257
           MGFPAN   D PLKFLIYGRTGWIGGLLGK+CES+GIDY YGSGRLENR S+ESDIA V
Sbjct: 1   MGFPANGSSDKPLKFLIYGRTGWIGGLLGKLCESQGIDYEYGSGRLENRISLESDIANV 59


>gb|ADB24764.1| UDP-L-rhamnose synthase [Gossypium hirsutum]
          Length = 300

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 48/59 (81%), Positives = 52/59 (88%), Gaps = 3/59 (5%)
 Frame = +3

Query: 90  MGFPAN---DAPLKFLIYGRTGWIGGLLGKICESKGIDYSYGSGRLENRPSIESDIATV 257
           MGFPAN   D PLKFLIYGRTGWIGGLLGK+CES+GIDY YGSGRLE+R S+ESDIA V
Sbjct: 1   MGFPANGSSDKPLKFLIYGRTGWIGGLLGKLCESQGIDYEYGSGRLESRISLESDIANV 59


>emb|CBI34766.3| unnamed protein product [Vitis vinifera]
          Length = 119

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/61 (72%), Positives = 53/61 (86%), Gaps = 5/61 (8%)
 Frame = +3

Query: 90  MGFPAN-----DAPLKFLIYGRTGWIGGLLGKICESKGIDYSYGSGRLENRPSIESDIAT 254
           MGFPAN     D  LKFLIYGRTGWIGGLLGK+CE++G++YSYGSGRLENR S+E+D+A+
Sbjct: 1   MGFPANGAAASDRKLKFLIYGRTGWIGGLLGKLCEAQGLEYSYGSGRLENRASLEADLAS 60

Query: 255 V 257
           V
Sbjct: 61  V 61


>ref|XP_002282339.1| PREDICTED: probable rhamnose biosynthetic enzyme 1 [Vitis vinifera]
          Length = 302

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 44/61 (72%), Positives = 53/61 (86%), Gaps = 5/61 (8%)
 Frame = +3

Query: 90  MGFPAN-----DAPLKFLIYGRTGWIGGLLGKICESKGIDYSYGSGRLENRPSIESDIAT 254
           MGFPAN     D  LKFLIYGRTGWIGGLLGK+CE++G++YSYGSGRLENR S+E+D+A+
Sbjct: 1   MGFPANGAAASDRKLKFLIYGRTGWIGGLLGKLCEAQGLEYSYGSGRLENRASLEADLAS 60

Query: 255 V 257
           V
Sbjct: 61  V 61


>gb|AFK41450.1| unknown [Medicago truncatula]
          Length = 298

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 44/58 (75%), Positives = 50/58 (86%), Gaps = 2/58 (3%)
 Frame = +3

Query: 90  MGFPA--NDAPLKFLIYGRTGWIGGLLGKICESKGIDYSYGSGRLENRPSIESDIATV 257
           MGFPA  +D PLKFLIYGRTGWIGGLLGK+C ++GI Y YGSGRLENR S+ESDIA +
Sbjct: 1   MGFPAPSSDTPLKFLIYGRTGWIGGLLGKLCTAQGIQYEYGSGRLENRSSLESDIAEI 58


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