BLASTX nr result

ID: Bupleurum21_contig00020425 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020425
         (905 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30066.3| unnamed protein product [Vitis vinifera]              328   1e-87
ref|XP_002274658.1| PREDICTED: peptide chain release factor 2-li...   328   1e-87
ref|XP_003520972.1| PREDICTED: peptide chain release factor 2-li...   307   3e-81
ref|XP_003535895.1| PREDICTED: peptide chain release factor 2-li...   305   1e-80
emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]   304   2e-80

>emb|CBI30066.3| unnamed protein product [Vitis vinifera]
          Length = 414

 Score =  328 bits (841), Expect = 1e-87
 Identities = 176/290 (60%), Positives = 216/290 (74%), Gaps = 1/290 (0%)
 Frame = +3

Query: 39  MAAQALCVRTI-ASHSSKWSSRFLNQRRLSSSIQACQSSNDKSKFYTELGLFSLRKKIEE 215
           MAA+++ V    A  SSKW +    + +L + ++A QS +DK+K + ELGLFSLRKKIE 
Sbjct: 1   MAAESVTVSVQRAPFSSKWQAS--RRDKLHTQVRASQSMDDKNKVFKELGLFSLRKKIEG 58

Query: 216 SVIRAENLAPSALEAEEATRVKQEEMIHGYDLWDDVATSNDILLSLADSVELVDALKDLQ 395
            V++A+ LAP+ALE EEA+R++QEEMI  Y+LWDDV  SN+IL  LADS ++VD LKDL 
Sbjct: 59  VVLQADMLAPAALELEEASRIRQEEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLT 118

Query: 396 YKAEEAKLITELAGMDVINYGLFKQAYTTSNDVRKLLDKYKMSKLLKGPYDAEGACVVIE 575
           YKAEEAKLIT+L  MD IN+GLF+QAY  S DV K L +Y+MSKLL+G +D EGAC+ I+
Sbjct: 119 YKAEEAKLITQLVEMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIK 178

Query: 576 AGSEGIISENQIWAKQLLKMYTRWARKQGYNGRVTEKCGSKTGGIKSAIIEFESKYAYGY 755
           AG  GI SE  IWA+QLL MYT+WA KQGY GRV EK  SK GGIKSA IEFES+Y YGY
Sbjct: 179 AGPRGIYSE--IWAEQLLSMYTKWAEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGY 236

Query: 756 LSGERGVHCVTRSTQSQSQCAEVNLAAVNVIPLFLNAAPDLIIDEKDLDI 905
           LSGERGVH + RS+  +S   E   A V+VIPLFL  APDL ID+ DL I
Sbjct: 237 LSGERGVHHMIRSSDDESILHETGSAVVDVIPLFLETAPDLQIDDGDLRI 286


>ref|XP_002274658.1| PREDICTED: peptide chain release factor 2-like [Vitis vinifera]
          Length = 417

 Score =  328 bits (841), Expect = 1e-87
 Identities = 176/290 (60%), Positives = 216/290 (74%), Gaps = 1/290 (0%)
 Frame = +3

Query: 39  MAAQALCVRTI-ASHSSKWSSRFLNQRRLSSSIQACQSSNDKSKFYTELGLFSLRKKIEE 215
           MAA+++ V    A  SSKW +    + +L + ++A QS +DK+K + ELGLFSLRKKIE 
Sbjct: 4   MAAESVTVSVQRAPFSSKWQAS--RRDKLHTQVRASQSMDDKNKVFKELGLFSLRKKIEG 61

Query: 216 SVIRAENLAPSALEAEEATRVKQEEMIHGYDLWDDVATSNDILLSLADSVELVDALKDLQ 395
            V++A+ LAP+ALE EEA+R++QEEMI  Y+LWDDV  SN+IL  LADS ++VD LKDL 
Sbjct: 62  VVLQADMLAPAALELEEASRIRQEEMIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLT 121

Query: 396 YKAEEAKLITELAGMDVINYGLFKQAYTTSNDVRKLLDKYKMSKLLKGPYDAEGACVVIE 575
           YKAEEAKLIT+L  MD IN+GLF+QAY  S DV K L +Y+MSKLL+G +D EGAC+ I+
Sbjct: 122 YKAEEAKLITQLVEMDAINHGLFEQAYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIK 181

Query: 576 AGSEGIISENQIWAKQLLKMYTRWARKQGYNGRVTEKCGSKTGGIKSAIIEFESKYAYGY 755
           AG  GI SE  IWA+QLL MYT+WA KQGY GRV EK  SK GGIKSA IEFES+Y YGY
Sbjct: 182 AGPRGIYSE--IWAEQLLSMYTKWAEKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGY 239

Query: 756 LSGERGVHCVTRSTQSQSQCAEVNLAAVNVIPLFLNAAPDLIIDEKDLDI 905
           LSGERGVH + RS+  +S   E   A V+VIPLFL  APDL ID+ DL I
Sbjct: 240 LSGERGVHHMIRSSDDESILHETGSAVVDVIPLFLETAPDLQIDDGDLRI 289


>ref|XP_003520972.1| PREDICTED: peptide chain release factor 2-like [Glycine max]
          Length = 437

 Score =  307 bits (786), Expect = 3e-81
 Identities = 159/300 (53%), Positives = 219/300 (73%), Gaps = 11/300 (3%)
 Frame = +3

Query: 39  MAAQALCVRTI----ASHSSKW--SSRFLNQRRL-----SSSIQACQSSNDKSKFYTELG 185
           + ++  C RT+    +S SSKW  SS    Q R      S  I+AC S  +K   Y ++G
Sbjct: 6   VGSEPACARTVHDVASSFSSKWQHSSTVKKQPRARILQCSLRIRACSSMANKKDIYKQVG 65

Query: 186 LFSLRKKIEESVIRAENLAPSALEAEEATRVKQEEMIHGYDLWDDVATSNDILLSLADSV 365
           LFSL++KIE++V+RAE  A +ALE EEAT +KQEEM+  +D+WDD A SNDIL+ LA+S 
Sbjct: 66  LFSLKRKIEDAVLRAETFASTALEMEEATWIKQEEMVRDFDMWDDPAKSNDILVKLANSA 125

Query: 366 ELVDALKDLQYKAEEAKLITELAGMDVINYGLFKQAYTTSNDVRKLLDKYKMSKLLKGPY 545
           ++VD+LKDL+YK EEAKLI +LA ++ I+YGL+KQAY TS DV +++D+Y++SKLLKGP+
Sbjct: 126 KVVDSLKDLKYKVEEAKLINQLAEINAIDYGLYKQAYETSLDVSEIVDQYEISKLLKGPF 185

Query: 546 DAEGACVVIEAGSEGIISENQIWAKQLLKMYTRWARKQGYNGRVTEKCGSKTGGIKSAII 725
           D  GAC+VI+AG +GI    ++WA+Q+L MY RWA+++GY GR+ +KC  K GGI SAII
Sbjct: 186 DMAGACLVIKAGPKGIYP--KLWAEQILSMYLRWAKRRGYEGRIVDKCPFKNGGINSAII 243

Query: 726 EFESKYAYGYLSGERGVHCVTRSTQSQSQCAEVNLAAVNVIPLFLNAAPDLIIDEKDLDI 905
           EFE + AYGYLSGE+GVH + R + ++S   E + A V+VIP+FL +A DL ID +DL I
Sbjct: 244 EFEFECAYGYLSGEKGVHYLIRGSPNESSQLEASSATVDVIPMFLESACDLEIDSEDLII 303


>ref|XP_003535895.1| PREDICTED: peptide chain release factor 2-like [Glycine max]
          Length = 427

 Score =  305 bits (781), Expect = 1e-80
 Identities = 159/300 (53%), Positives = 218/300 (72%), Gaps = 11/300 (3%)
 Frame = +3

Query: 39  MAAQALCVRTI----ASHSSKW--SSRFLNQRRL-----SSSIQACQSSNDKSKFYTELG 185
           + ++  C RT+    +S SSKW  SS    Q R      S  I+AC S  +K   Y ++G
Sbjct: 6   VGSEPACARTVHDVASSFSSKWQHSSTVKKQPRARIPQCSLRIRACSSMANKKDIYNQVG 65

Query: 186 LFSLRKKIEESVIRAENLAPSALEAEEATRVKQEEMIHGYDLWDDVATSNDILLSLADSV 365
           LFSL++KIE++V+RAE  A +ALE EEAT +KQEEM+  +D+WDD A SNDIL+ LA+S 
Sbjct: 66  LFSLKRKIEDAVLRAEMFASTALEMEEATWIKQEEMVRDFDMWDDPAKSNDILVKLANSA 125

Query: 366 ELVDALKDLQYKAEEAKLITELAGMDVINYGLFKQAYTTSNDVRKLLDKYKMSKLLKGPY 545
           ++VD+LKDL+YK EEAKLI +LA ++ I+YGL+KQAY TS DV +++D Y++SKLLKGP+
Sbjct: 126 KVVDSLKDLKYKVEEAKLINQLAEINAIDYGLYKQAYETSLDVSEIVDLYEISKLLKGPF 185

Query: 546 DAEGACVVIEAGSEGIISENQIWAKQLLKMYTRWARKQGYNGRVTEKCGSKTGGIKSAII 725
           D  GAC+VI+AG +G+    ++WA+Q+L MY RWA++QGY GR+ +KC  K GGI SAII
Sbjct: 186 DMAGACLVIKAGPKGMYP--KLWAEQILSMYLRWAKRQGYEGRIVDKCLYKNGGINSAII 243

Query: 726 EFESKYAYGYLSGERGVHCVTRSTQSQSQCAEVNLAAVNVIPLFLNAAPDLIIDEKDLDI 905
           EFE + AYGYLSGE+GVH + R + ++S   E + A V+VIP+FL +A DL ID +DL I
Sbjct: 244 EFEFECAYGYLSGEKGVHYLIRGSPNESSQLEASSATVDVIPMFLESACDLEIDSEDLII 303


>emb|CAN74766.1| hypothetical protein VITISV_041859 [Vitis vinifera]
          Length = 450

 Score =  304 bits (779), Expect = 2e-80
 Identities = 176/326 (53%), Positives = 215/326 (65%), Gaps = 37/326 (11%)
 Frame = +3

Query: 39  MAAQALCVRTI-ASHSSKWSSRFLNQRRLSSSIQACQSSNDKSKFYTELGL--------- 188
           MAA+++ V    A  SSKW +   N  +L + ++A QS +DK+K + ELGL         
Sbjct: 1   MAAESVTVSVQRAPFSSKWQASRRN--KLHTQVRASQSMDDKNKVFKELGLSPYAFPLLI 58

Query: 189 --------------------------FSLRKKIEESVIRAENLAPSALEAEEATRVKQEE 290
                                     F LRKKIE  V++A+ LAP+ALE EEA+R++QEE
Sbjct: 59  LSQFLIRMILVDLTTISQMGKTYLVCFLLRKKIEGVVLQADMLAPAALELEEASRIRQEE 118

Query: 291 MIHGYDLWDDVATSNDILLSLADSVELVDALKDLQYKAEEAKLITELAGMDVINYGLFKQ 470
           MI  Y+LWDDV  SN+IL  LADS ++VD LKDL YKAEEAKLIT+L  MD IN+GLF+Q
Sbjct: 119 MIRKYNLWDDVTKSNEILGKLADSSKVVDTLKDLTYKAEEAKLITQLVEMDAINHGLFEQ 178

Query: 471 AYTTSNDVRKLLDKYKMSKLLKGPYDAEGACVVIEAGSEGIISENQIWAKQLLKMYTRWA 650
           AY  S DV K L +Y+MSKLL+G +D EGAC+ I+AG  GI SE  IWA+QLL MYT+WA
Sbjct: 179 AYNASVDVSKFLYQYEMSKLLRGQFDMEGACLTIKAGPRGIYSE--IWAEQLLSMYTKWA 236

Query: 651 RKQGYNGRVTEKCGSKTGGIKSAIIEFESKYAYGYLSGERGVHCVTRSTQSQSQCAE-VN 827
            KQGY GRV EK  SK GGIKSA IEFES+Y YGYLSGERGVH + RS+  +S   E   
Sbjct: 237 EKQGYKGRVVEKYASKNGGIKSATIEFESEYGYGYLSGERGVHHMIRSSDDESILHEQTG 296

Query: 828 LAAVNVIPLFLNAAPDLIIDEKDLDI 905
            A V+VIPLFL  APDL ID+ DL I
Sbjct: 297 SAVVDVIPLFLETAPDLQIDDGDLRI 322


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