BLASTX nr result

ID: Bupleurum21_contig00020422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020422
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302935.1| predicted protein [Populus trichocarpa] gi|2...   114   6e-45
ref|XP_003538389.1| PREDICTED: centromere protein V-like [Glycin...   108   3e-42
emb|CBI34157.3| unnamed protein product [Vitis vinifera]              106   5e-42
ref|XP_003553110.1| PREDICTED: centromere protein V-like [Glycin...   110   9e-42
ref|XP_002279711.1| PREDICTED: centromere protein V-like [Vitis ...   104   2e-41

>ref|XP_002302935.1| predicted protein [Populus trichocarpa] gi|222844661|gb|EEE82208.1|
           predicted protein [Populus trichocarpa]
          Length = 137

 Score =  114 bits (284), Expect(2) = 6e-45
 Identities = 48/64 (75%), Positives = 57/64 (89%)
 Frame = +2

Query: 68  MNSPMVVHSGGCHCKSVRWKVHAPTSIVAWDCNCSICSMIRNTHFIVPSERFELLGDSKE 247
           M S MV+H+GGCHC+ VRW+V AP+S+VAW+CNCS CSM  NTHFIVPSE+F+LLGDSKE
Sbjct: 1   MESDMVIHNGGCHCRRVRWRVQAPSSVVAWNCNCSDCSMRGNTHFIVPSEKFDLLGDSKE 60

Query: 248 FLTT 259
           FLTT
Sbjct: 61  FLTT 64



 Score = 92.8 bits (229), Expect(2) = 6e-45
 Identities = 39/50 (78%), Positives = 46/50 (92%)
 Frame = +3

Query: 366 FYIPRSNPDGVAVTFRCIDPGTVSHVEIKVFDGENWENSYTMSGIASCSK 515
           FYIPRSNPDGVAVTFRC+DPGT++HVEIK +DG NWE+SY  +GIASCS+
Sbjct: 85  FYIPRSNPDGVAVTFRCVDPGTLTHVEIKHYDGRNWESSYNQTGIASCSQ 134


>ref|XP_003538389.1| PREDICTED: centromere protein V-like [Glycine max]
          Length = 137

 Score =  108 bits (269), Expect(2) = 3e-42
 Identities = 47/64 (73%), Positives = 54/64 (84%)
 Frame = +2

Query: 68  MNSPMVVHSGGCHCKSVRWKVHAPTSIVAWDCNCSICSMIRNTHFIVPSERFELLGDSKE 247
           M+   VVH+GGCHCKSVRWKV AP+S+VAWDCNCS C M  NTHFIVP+  FELLGDS++
Sbjct: 1   MDVEKVVHTGGCHCKSVRWKVVAPSSVVAWDCNCSTCYMRANTHFIVPANNFELLGDSEK 60

Query: 248 FLTT 259
           FLTT
Sbjct: 61  FLTT 64



 Score = 89.4 bits (220), Expect(2) = 3e-42
 Identities = 37/51 (72%), Positives = 47/51 (92%)
 Frame = +3

Query: 366 FYIPRSNPDGVAVTFRCIDPGTVSHVEIKVFDGENWENSYTMSGIASCSKV 518
           FY PRSNPDGVAVTFRC+DPGT++HVEI+ FDG+NW+++YT +GI+S SKV
Sbjct: 85  FYCPRSNPDGVAVTFRCVDPGTLTHVEIRYFDGKNWDSAYTQTGISSYSKV 135


>emb|CBI34157.3| unnamed protein product [Vitis vinifera]
          Length = 201

 Score =  106 bits (264), Expect(2) = 5e-42
 Identities = 48/72 (66%), Positives = 58/72 (80%), Gaps = 1/72 (1%)
 Frame = +2

Query: 47  AEDLEN-KMNSPMVVHSGGCHCKSVRWKVHAPTSIVAWDCNCSICSMIRNTHFIVPSERF 223
           +E LE+ +M+S  VVHSGGCHC+ VRWKV AP S++ W C+CS C M  N HFIVP+E+F
Sbjct: 53  SEGLESSEMDSKKVVHSGGCHCRRVRWKVEAPASVLVWKCDCSNCFMRGNAHFIVPAEKF 112

Query: 224 ELLGDSKEFLTT 259
           ELLGDSKEFLTT
Sbjct: 113 ELLGDSKEFLTT 124



 Score = 90.5 bits (223), Expect(2) = 5e-42
 Identities = 41/54 (75%), Positives = 46/54 (85%)
 Frame = +3

Query: 366 FYIPRSNPDGVAVTFRCIDPGTVSHVEIKVFDGENWENSYTMSGIASCSKVLPE 527
           FYIPRSN DGVAV+F C+DPGT++HVEIK FDG+NWENSY  S IASCSKV  E
Sbjct: 145 FYIPRSNQDGVAVSFMCVDPGTLTHVEIKNFDGKNWENSYIESNIASCSKVQNE 198


>ref|XP_003553110.1| PREDICTED: centromere protein V-like [Glycine max]
          Length = 137

 Score =  110 bits (274), Expect(2) = 9e-42
 Identities = 47/64 (73%), Positives = 56/64 (87%)
 Frame = +2

Query: 68  MNSPMVVHSGGCHCKSVRWKVHAPTSIVAWDCNCSICSMIRNTHFIVPSERFELLGDSKE 247
           M++  VVH+GGCHCKSVRWKV AP+S+VAWDCNCS C M  NTHFIVP++ FELLGDS++
Sbjct: 1   MDAEKVVHTGGCHCKSVRWKVVAPSSVVAWDCNCSTCYMRANTHFIVPADNFELLGDSEK 60

Query: 248 FLTT 259
           FLTT
Sbjct: 61  FLTT 64



 Score = 85.9 bits (211), Expect(2) = 9e-42
 Identities = 36/51 (70%), Positives = 46/51 (90%)
 Frame = +3

Query: 366 FYIPRSNPDGVAVTFRCIDPGTVSHVEIKVFDGENWENSYTMSGIASCSKV 518
           FY PRSNPDGVAVTFRC+DPGT++HVEI+ FDG+NW+++Y  +GI+S SKV
Sbjct: 85  FYHPRSNPDGVAVTFRCVDPGTLTHVEIRHFDGKNWDSAYNQTGISSFSKV 135


>ref|XP_002279711.1| PREDICTED: centromere protein V-like [Vitis vinifera]
          Length = 141

 Score =  104 bits (260), Expect(2) = 2e-41
 Identities = 45/64 (70%), Positives = 52/64 (81%)
 Frame = +2

Query: 68  MNSPMVVHSGGCHCKSVRWKVHAPTSIVAWDCNCSICSMIRNTHFIVPSERFELLGDSKE 247
           M+S  VVHSGGCHC+ VRWKV AP S++ W C+CS C M  N HFIVP+E+FELLGDSKE
Sbjct: 1   MDSKKVVHSGGCHCRRVRWKVEAPASVLVWKCDCSNCFMRGNAHFIVPAEKFELLGDSKE 60

Query: 248 FLTT 259
           FLTT
Sbjct: 61  FLTT 64



 Score = 90.5 bits (223), Expect(2) = 2e-41
 Identities = 41/54 (75%), Positives = 46/54 (85%)
 Frame = +3

Query: 366 FYIPRSNPDGVAVTFRCIDPGTVSHVEIKVFDGENWENSYTMSGIASCSKVLPE 527
           FYIPRSN DGVAV+F C+DPGT++HVEIK FDG+NWENSY  S IASCSKV  E
Sbjct: 85  FYIPRSNQDGVAVSFMCVDPGTLTHVEIKNFDGKNWENSYIESNIASCSKVQNE 138


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