BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020413
         (1138 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal doma...   323   6e-86
ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal doma...   322   8e-86
ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative ...   320   4e-85
ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal doma...   319   9e-85
ref|XP_002437361.1| hypothetical protein SORBIDRAFT_10g025580 [S...   293   5e-77

>ref|XP_004141638.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Cucumis sativus]
          Length = 452

 Score =  323 bits (827), Expect = 6e-86
 Identities = 171/306 (55%), Positives = 216/306 (70%)
 Frame = -3

Query: 920 KKQKVELLEKVIDSHGSTSHGQPIKSSEASTESNICTHPGLIGGMCIKCGQKMDDDQSGV 741
           K++KVE LE   +S     H    +S E  ++  +C+HPG  G MCI CGQ++D++ SGV
Sbjct: 50  KRRKVEKLE---NSEEDIMHEVEEQSLEVLSKQQLCSHPGSFGNMCIICGQRLDEE-SGV 105

Query: 740 AFGYIHKDLRLASDEIARLRDKDXXXXXXXXXXXXXXXXXXXXXNSTLLKHITPEEEYLK 561
            FGYIHK+LRL +DEI R+R+K+                     NST L+++T EEEYL+
Sbjct: 106 TFGYIHKELRLNNDEINRMRNKEMKELLQRKKLILVLDLDHTLLNSTELRYLTVEEEYLR 165

Query: 560 IQPDSLPDSLKGSLFRLDFIHMMTKLRPFVRTFLKEASKLFEMYIYTMGERPYALDMARL 381
            Q DSL D  KGSLF L+ +H MTKLRPFV +FLKEASKLFEMYIYTMGER YA +MA+L
Sbjct: 166 SQTDSLDDVTKGSLFLLNSVHTMTKLRPFVHSFLKEASKLFEMYIYTMGERRYAFEMAKL 225

Query: 380 LDPENIYFNSKVIAQGDCTQRHQKGLDVVLGQDSAVLILDDTEQVWVKHKENLILMERYH 201
           LDP+  YF+SKVI++ D TQ+HQKGLDVVLG++SAVLILDDTE  W KHKENLILMERYH
Sbjct: 226 LDPKKEYFSSKVISRDDGTQKHQKGLDVVLGKESAVLILDDTENAWTKHKENLILMERYH 285

Query: 200 YFVSSYRQFGFDCXXXXXXXXXXXXXDGALANVLEVLRRVHSIFFDTEQGVDIMKQDIRQ 21
           +F SS RQFGF+C             DGAL  +L+VL++VH +FF+   G D++ +D+RQ
Sbjct: 286 FFASSCRQFGFNCKSLSELKNDESETDGALTTILKVLKQVHHMFFNEVSG-DLVDRDVRQ 344

Query: 20  VLKTVR 3
           VLKTVR
Sbjct: 345 VLKTVR 350


>ref|XP_003550691.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Glycine max]
          Length = 442

 Score =  322 bits (826), Expect = 8e-86
 Identities = 173/307 (56%), Positives = 220/307 (71%), Gaps = 1/307 (0%)
 Frame = -3

Query: 920 KKQKVELLEKVIDSHGSTSHGQPIKSSEASTESNIC-THPGLIGGMCIKCGQKMDDDQSG 744
           K++K E +E   ++ GSTS G   +S EAS+E ++C THPG  G MCI+CGQK+D + SG
Sbjct: 51  KRRKFESIE---ETEGSTSEGIVKRSLEASSEVDVCCTHPGSFGNMCIRCGQKLDGE-SG 106

Query: 743 VAFGYIHKDLRLASDEIARLRDKDXXXXXXXXXXXXXXXXXXXXXNSTLLKHITPEEEYL 564
           V FGYIHK LRL  +EI+RLR+ D                     NST L  +T EE +L
Sbjct: 107 VTFGYIHKGLRLHDEEISRLRNTDMKSLLGRKKLYLVLDLDHTLLNSTHLAQLTSEELHL 166

Query: 563 KIQPDSLPDSLKGSLFRLDFIHMMTKLRPFVRTFLKEASKLFEMYIYTMGERPYALDMAR 384
             Q DSL +  KGSLF+L+ ++MMTKLRPFVR FLKEAS++FEMYIYTMG+RPYAL+MA+
Sbjct: 167 LNQTDSLTNVSKGSLFKLEHMNMMTKLRPFVRPFLKEASEMFEMYIYTMGDRPYALEMAK 226

Query: 383 LLDPENIYFNSKVIAQGDCTQRHQKGLDVVLGQDSAVLILDDTEQVWVKHKENLILMERY 204
           LLDP+  YFN+KVI++ D TQ+HQKGLDVVLGQ+SAV+ILDDTE  W+KHK+NLILMERY
Sbjct: 227 LLDPQGEYFNAKVISRDDGTQKHQKGLDVVLGQESAVIILDDTEHAWMKHKDNLILMERY 286

Query: 203 HYFVSSYRQFGFDCXXXXXXXXXXXXXDGALANVLEVLRRVHSIFFDTEQGVDIMKQDIR 24
           H+F SS RQFGF+C             DGALA +L+VL++VH +FFD ++  D   QD+R
Sbjct: 287 HFFGSSCRQFGFNCKSLAELKSDEDETDGALAKILKVLKQVHCMFFDKQEDFD--DQDVR 344

Query: 23  QVLKTVR 3
           QVL +VR
Sbjct: 345 QVLSSVR 351


>ref|XP_002526210.1| RNA polymerase II ctd phosphatase, putative [Ricinus communis]
           gi|223534449|gb|EEF36151.1| RNA polymerase II ctd
           phosphatase, putative [Ricinus communis]
          Length = 478

 Score =  320 bits (820), Expect = 4e-85
 Identities = 173/307 (56%), Positives = 212/307 (69%), Gaps = 1/307 (0%)
 Frame = -3

Query: 920 KKQKVELLEKVIDSHGSTSHGQPIKSSEASTESNICTHPGLIGGMCIKCGQKMDDDQSGV 741
           K+ +VE LE   +   ST      ++  AS+    CTHPG  G MCI CG+++ ++ +GV
Sbjct: 77  KRSRVETLENGENPKESTRVSLD-QTLVASSSKVACTHPGSFGDMCILCGERLIEE-TGV 134

Query: 740 AFGYIHKDLRLASDEIARLRDKDXXXXXXXXXXXXXXXXXXXXXNSTLLKHITPEEEYLK 561
            FGYIHK LRLA+DEI RLR+ D                     NST L H+T EEEYLK
Sbjct: 135 TFGYIHKGLRLANDEIVRLRNTDMKNLLRHRKLYLVLDLDHTLLNSTQLMHLTAEEEYLK 194

Query: 560 IQPDSLPDSLKGSLFRLDFIHMMTKLRPFVRTFLKEASKLFEMYIYTMGERPYALDMARL 381
            Q DS+ D   GSLF +DF+HMMTKLRPF+RTFLKEAS++FEMYIYTMG+R YAL+MA+ 
Sbjct: 195 SQIDSMQDVSNGSLFMVDFMHMMTKLRPFIRTFLKEASQMFEMYIYTMGDRAYALEMAKF 254

Query: 380 LDPENIYFNSKVIAQGDCTQRHQKGLDVVLGQDSAVLILDDTEQVWVKHKENLILMERYH 201
           LDP   YFN++VI++ D TQRHQKGLD+VLGQ+SAVLILDDTE  W KHK+NLILMERYH
Sbjct: 255 LDPGREYFNARVISRDDGTQRHQKGLDIVLGQESAVLILDDTENAWTKHKDNLILMERYH 314

Query: 200 YFVSSYRQFGFDCXXXXXXXXXXXXXDGALANVLEVLRRVHSIFFD-TEQGVDIMKQDIR 24
           +F SS RQFGF+C             DGALA+VL+VLRR+H IFFD  E  +D   +D+R
Sbjct: 315 FFASSCRQFGFECKSLSQLKSDENESDGALASVLKVLRRIHHIFFDELEDAID--GRDVR 372

Query: 23  QVLKTVR 3
           QVL TVR
Sbjct: 373 QVLSTVR 379


>ref|XP_003518215.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           4-like [Glycine max]
          Length = 428

 Score =  319 bits (817), Expect = 9e-85
 Identities = 164/285 (57%), Positives = 205/285 (71%)
 Frame = -3

Query: 857 QPIKSSEASTESNICTHPGLIGGMCIKCGQKMDDDQSGVAFGYIHKDLRLASDEIARLRD 678
           + I+ +E ST   +CTHPG  G MCI+CGQK+D + SGV FGYIHK LRL  +EI+RLR+
Sbjct: 56  ESIEETEGSTSEGVCTHPGSFGNMCIRCGQKLDGE-SGVTFGYIHKGLRLHDEEISRLRN 114

Query: 677 KDXXXXXXXXXXXXXXXXXXXXXNSTLLKHITPEEEYLKIQPDSLPDSLKGSLFRLDFIH 498
            D                     NST L H+T EE +L  Q DSL D  KGSLF+L+ ++
Sbjct: 115 TDMKSLLCRKKLYLVLDLDHTLLNSTHLAHLTSEESHLLNQTDSLRDVSKGSLFKLEHMN 174

Query: 497 MMTKLRPFVRTFLKEASKLFEMYIYTMGERPYALDMARLLDPENIYFNSKVIAQGDCTQR 318
           MMTKLRPFVR FLKEAS++FEMYIYTMG+RPYAL+MA+LLDP+  YFN+KVI++ D TQ+
Sbjct: 175 MMTKLRPFVRPFLKEASEMFEMYIYTMGDRPYALEMAKLLDPQGEYFNAKVISRDDGTQK 234

Query: 317 HQKGLDVVLGQDSAVLILDDTEQVWVKHKENLILMERYHYFVSSYRQFGFDCXXXXXXXX 138
           HQKGLDVVLGQ+SAVLILDDTE  W+KHK+NLILMERYH+F SS RQFGF+C        
Sbjct: 235 HQKGLDVVLGQESAVLILDDTEHAWMKHKDNLILMERYHFFGSSCRQFGFNCKSLAELKS 294

Query: 137 XXXXXDGALANVLEVLRRVHSIFFDTEQGVDIMKQDIRQVLKTVR 3
                DGALA +L+VL++VH +FFD ++  D   +D+RQ+L  VR
Sbjct: 295 DENETDGALAKILKVLKQVHCMFFDKQEDFD--DRDVRQMLSLVR 337


>ref|XP_002437361.1| hypothetical protein SORBIDRAFT_10g025580 [Sorghum bicolor]
           gi|241915584|gb|EER88728.1| hypothetical protein
           SORBIDRAFT_10g025580 [Sorghum bicolor]
          Length = 558

 Score =  293 bits (750), Expect = 5e-77
 Identities = 157/307 (51%), Positives = 197/307 (64%), Gaps = 1/307 (0%)
 Frame = -3

Query: 920 KKQKVELLEKVIDSHGSTSHGQPIKSSEASTESNICTHPGLIGGMCIKCGQKMDDDQ-SG 744
           K+++VE  E++ D   S    +    +  + +   C HPG  GG+C +CG+  D++  SG
Sbjct: 74  KRRRVE--EQLQDQGTSVRPDKIPTGASKNVQVEACPHPGYFGGLCFRCGKPQDEENVSG 131

Query: 743 VAFGYIHKDLRLASDEIARLRDKDXXXXXXXXXXXXXXXXXXXXXNSTLLKHITPEEEYL 564
           VAFGYIHK LRL + EI RLR  D                     NST L+ I+  E+ L
Sbjct: 132 VAFGYIHKGLRLGTSEIDRLRGADLKNLLRERKLVLILDLDHTLINSTKLQDISSAEKDL 191

Query: 563 KIQPDSLPDSLKGSLFRLDFIHMMTKLRPFVRTFLKEASKLFEMYIYTMGERPYALDMAR 384
            IQ  +  D    S+F LD + M+TKLRPFVR FLKEAS +FEMYIYTMG++ YA+++A+
Sbjct: 192 GIQTAASKDDPNRSIFSLDSMQMLTKLRPFVREFLKEASNMFEMYIYTMGDKAYAIEIAK 251

Query: 383 LLDPENIYFNSKVIAQGDCTQRHQKGLDVVLGQDSAVLILDDTEQVWVKHKENLILMERY 204
           LLDP NIYF SKVI+  DCTQRHQKGLDV+LG +S  +ILDDTE VW KHKENLILMERY
Sbjct: 252 LLDPSNIYFPSKVISNSDCTQRHQKGLDVILGAESVAVILDDTEYVWQKHKENLILMERY 311

Query: 203 HYFVSSYRQFGFDCXXXXXXXXXXXXXDGALANVLEVLRRVHSIFFDTEQGVDIMKQDIR 24
           H+F SS RQFGF               DGALA VL+VL+R+HSIFFD     D+  QD+R
Sbjct: 312 HFFASSCRQFGFGVRSLSESMQDERESDGALATVLDVLKRIHSIFFDLAVETDLSSQDVR 371

Query: 23  QVLKTVR 3
           QV+K VR
Sbjct: 372 QVIKAVR 378