BLASTX nr result

ID: Bupleurum21_contig00020408 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020408
         (426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299328.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-24
emb|CBI38159.3| unnamed protein product [Vitis vinifera]               96   2e-20
emb|CAN80808.1| hypothetical protein VITISV_008190 [Vitis vinifera]    96   2e-20
ref|XP_002265828.1| PREDICTED: 5-methylthioadenosine/S-adenosylh...    96   2e-20
ref|XP_004152121.1| PREDICTED: 5-methylthioadenosine/S-adenosylh...    93   2e-19

>ref|XP_002299328.1| predicted protein [Populus trichocarpa] gi|222846586|gb|EEE84133.1|
           predicted protein [Populus trichocarpa]
          Length = 225

 Score =  110 bits (274), Expect(2) = 1e-24
 Identities = 53/72 (73%), Positives = 60/72 (83%), Gaps = 3/72 (4%)
 Frame = +3

Query: 48  ILRNGGIVVEEDRIIAIGQSDDILRRFS---HHSQIMDLQSHFLLPGLINTHVHTSQQLG 218
           + +NGGIV+E+D+I AIGQS DIL +FS   HH QI+DL SH LLPG INTHVHTSQQL 
Sbjct: 29  VFKNGGIVIEQDKIKAIGQSSDILSQFSSVAHHLQIIDLHSHILLPGFINTHVHTSQQLA 88

Query: 219 RGIADDVDLMTW 254
           RGIADDVDLMTW
Sbjct: 89  RGIADDVDLMTW 100



 Score = 27.7 bits (60), Expect(2) = 1e-24
 Identities = 11/15 (73%), Positives = 14/15 (93%)
 Frame = +2

Query: 2  VTVIHNAVIVTMDSD 46
          VT+IHNA+IVTMD +
Sbjct: 12 VTIIHNAMIVTMDPE 26


>emb|CBI38159.3| unnamed protein product [Vitis vinifera]
          Length = 493

 Score = 95.5 bits (236), Expect(2) = 2e-20
 Identities = 47/70 (67%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
 Frame = +3

Query: 48  ILRNGGIVVEEDRIIAIGQSDDILRRFSHHSQ-IMDLQSHFLLPGLINTHVHTSQQLGRG 224
           +  NG IVVE+DRIIA+GQS +I  +F+  +Q + DL    LLPG INTHVHTSQQLGRG
Sbjct: 25  VFYNGAIVVEKDRIIALGQSHNIFNQFAPLAQNVFDLHGQILLPGFINTHVHTSQQLGRG 84

Query: 225 IADDVDLMTW 254
           IADDVDLMTW
Sbjct: 85  IADDVDLMTW 94



 Score = 28.1 bits (61), Expect(2) = 2e-20
 Identities = 11/15 (73%), Positives = 15/15 (100%)
 Frame = +2

Query: 2  VTVIHNAVIVTMDSD 46
          VT++HNA+IVTMDS+
Sbjct: 8  VTLLHNALIVTMDSE 22


>emb|CAN80808.1| hypothetical protein VITISV_008190 [Vitis vinifera]
          Length = 470

 Score = 95.5 bits (236), Expect(2) = 2e-20
 Identities = 47/70 (67%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
 Frame = +3

Query: 48  ILRNGGIVVEEDRIIAIGQSDDILRRFSHHSQ-IMDLQSHFLLPGLINTHVHTSQQLGRG 224
           +  NG IVVE+DRIIA+GQS +I  +F+  +Q + DL    LLPG INTHVHTSQQLGRG
Sbjct: 25  VFYNGAIVVEKDRIIALGQSHNIFNQFAPLAQNVFDLHGQILLPGFINTHVHTSQQLGRG 84

Query: 225 IADDVDLMTW 254
           IADDVDLMTW
Sbjct: 85  IADDVDLMTW 94



 Score = 28.1 bits (61), Expect(2) = 2e-20
 Identities = 11/15 (73%), Positives = 15/15 (100%)
 Frame = +2

Query: 2  VTVIHNAVIVTMDSD 46
          VT++HNA+IVTMDS+
Sbjct: 8  VTLLHNALIVTMDSE 22


>ref|XP_002265828.1| PREDICTED: 5-methylthioadenosine/S-adenosylhomocysteine deaminase
           [Vitis vinifera]
          Length = 469

 Score = 95.5 bits (236), Expect(2) = 2e-20
 Identities = 47/70 (67%), Positives = 55/70 (78%), Gaps = 1/70 (1%)
 Frame = +3

Query: 48  ILRNGGIVVEEDRIIAIGQSDDILRRFSHHSQ-IMDLQSHFLLPGLINTHVHTSQQLGRG 224
           +  NG IVVE+DRIIA+GQS +I  +F+  +Q + DL    LLPG INTHVHTSQQLGRG
Sbjct: 25  VFYNGAIVVEKDRIIALGQSHNIFNQFAPLAQNVFDLHGQILLPGFINTHVHTSQQLGRG 84

Query: 225 IADDVDLMTW 254
           IADDVDLMTW
Sbjct: 85  IADDVDLMTW 94



 Score = 28.1 bits (61), Expect(2) = 2e-20
 Identities = 11/15 (73%), Positives = 15/15 (100%)
 Frame = +2

Query: 2  VTVIHNAVIVTMDSD 46
          VT++HNA+IVTMDS+
Sbjct: 8  VTLLHNALIVTMDSE 22


>ref|XP_004152121.1| PREDICTED: 5-methylthioadenosine/S-adenosylhomocysteine
           deaminase-like [Cucumis sativus]
           gi|449484683|ref|XP_004156951.1| PREDICTED:
           5-methylthioadenosine/S-adenosylhomocysteine
           deaminase-like [Cucumis sativus]
          Length = 484

 Score = 93.2 bits (230), Expect(2) = 2e-19
 Identities = 48/72 (66%), Positives = 54/72 (75%), Gaps = 3/72 (4%)
 Frame = +3

Query: 48  ILRNGGIVVEEDRIIAIGQSDDILRRFS---HHSQIMDLQSHFLLPGLINTHVHTSQQLG 218
           + RNGGIV+  D+I AIG S +IL +FS   HH  I+DL S  LLPG INTHVHTSQQL 
Sbjct: 40  VFRNGGIVISGDKIKAIGHSSEILHQFSASAHH--IIDLHSQILLPGFINTHVHTSQQLA 97

Query: 219 RGIADDVDLMTW 254
           R IADDVDLMTW
Sbjct: 98  RSIADDVDLMTW 109



 Score = 27.3 bits (59), Expect(2) = 2e-19
 Identities = 13/22 (59%), Positives = 18/22 (81%)
 Frame = +2

Query: 2  VTVIHNAVIVTMDSDHSPKRRN 67
          +T++HNA+I+TMDS HS   RN
Sbjct: 23 LTLLHNALIITMDS-HSRVFRN 43


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