BLASTX nr result

ID: Bupleurum21_contig00020402 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020402
         (343 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235984.1| uncharacterized protein LOC100526919 [Glycin...   152   4e-35
gb|AEI90836.1| RBX1 [Hevea brasiliensis]                              150   1e-34
ref|XP_004144035.1| PREDICTED: RING-box protein 1a-like [Cucumis...   150   1e-34
ref|XP_002534469.1| ring finger, putative [Ricinus communis] gi|...   149   2e-34
ref|XP_003527486.1| PREDICTED: RING-box protein 1a-like [Glycine...   147   7e-34

>ref|NP_001235984.1| uncharacterized protein LOC100526919 [Glycine max]
           gi|255631147|gb|ACU15939.1| unknown [Glycine max]
          Length = 118

 Score =  152 bits (383), Expect = 4e-35
 Identities = 72/88 (81%), Positives = 76/88 (86%)
 Frame = -1

Query: 265 MDTDVTMVPAGEVATEAGPXXXXXXXXXSTKKPKRFEIKKWNAVALWAWDIVVDNCAICR 86
           +D+DVTMVPAGE +T AGP          TKKPKRFEIKKWNAV+LWAWDIVVDNCAICR
Sbjct: 4   LDSDVTMVPAGEPSTSAGPSSS-------TKKPKRFEIKKWNAVSLWAWDIVVDNCAICR 56

Query: 85  NHIMDLCIECQANQASATSEECTVAWGV 2
           NHIMDLCIECQANQASATSEECTVAWGV
Sbjct: 57  NHIMDLCIECQANQASATSEECTVAWGV 84


>gb|AEI90836.1| RBX1 [Hevea brasiliensis]
          Length = 116

 Score =  150 bits (379), Expect = 1e-34
 Identities = 74/89 (83%), Positives = 76/89 (85%), Gaps = 1/89 (1%)
 Frame = -1

Query: 265 MDTDVTMVPAGEVATE-AGPXXXXXXXXXSTKKPKRFEIKKWNAVALWAWDIVVDNCAIC 89
           MDTDVTMVPAGE ++  AGP          TKKPKRFEIKKWNAVALWAWDIVVDNCAIC
Sbjct: 1   MDTDVTMVPAGEASSSVAGPSSS-------TKKPKRFEIKKWNAVALWAWDIVVDNCAIC 53

Query: 88  RNHIMDLCIECQANQASATSEECTVAWGV 2
           RNHIMDLCIECQANQASATSEECTVAWGV
Sbjct: 54  RNHIMDLCIECQANQASATSEECTVAWGV 82


>ref|XP_004144035.1| PREDICTED: RING-box protein 1a-like [Cucumis sativus]
           gi|449500506|ref|XP_004161116.1| PREDICTED: RING-box
           protein 1a-like [Cucumis sativus]
          Length = 117

 Score =  150 bits (378), Expect = 1e-34
 Identities = 71/88 (80%), Positives = 75/88 (85%)
 Frame = -1

Query: 265 MDTDVTMVPAGEVATEAGPXXXXXXXXXSTKKPKRFEIKKWNAVALWAWDIVVDNCAICR 86
           +DTDV MVPAGE ++ AGP          +KKPKRFEIKKWNAVALWAWDIVVDNCAICR
Sbjct: 4   LDTDVPMVPAGEASSSAGPSS--------SKKPKRFEIKKWNAVALWAWDIVVDNCAICR 55

Query: 85  NHIMDLCIECQANQASATSEECTVAWGV 2
           NHIMDLCIECQANQASATSEECTVAWGV
Sbjct: 56  NHIMDLCIECQANQASATSEECTVAWGV 83


>ref|XP_002534469.1| ring finger, putative [Ricinus communis]
           gi|223525242|gb|EEF27918.1| ring finger, putative
           [Ricinus communis]
          Length = 83

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/89 (82%), Positives = 76/89 (85%), Gaps = 1/89 (1%)
 Frame = -1

Query: 265 MDTDVTMVPAGEVATEA-GPXXXXXXXXXSTKKPKRFEIKKWNAVALWAWDIVVDNCAIC 89
           MDTDVTMVPAGE ++ A GP          TKKPKRFEIKKWNAVALWAWDIVVDNCAIC
Sbjct: 1   MDTDVTMVPAGEASSSAAGPSSS-------TKKPKRFEIKKWNAVALWAWDIVVDNCAIC 53

Query: 88  RNHIMDLCIECQANQASATSEECTVAWGV 2
           RNHIMDLCIECQANQASATSEECTVAWG+
Sbjct: 54  RNHIMDLCIECQANQASATSEECTVAWGM 82


>ref|XP_003527486.1| PREDICTED: RING-box protein 1a-like [Glycine max]
           gi|83701143|gb|ABC41134.1| RING-box protein [Arachis
           hypogaea]
          Length = 116

 Score =  147 bits (372), Expect = 7e-34
 Identities = 70/88 (79%), Positives = 75/88 (85%)
 Frame = -1

Query: 265 MDTDVTMVPAGEVATEAGPXXXXXXXXXSTKKPKRFEIKKWNAVALWAWDIVVDNCAICR 86
           +D+DV MVPAGE ++ AGP          +KKPKRFEIKKWNAVALWAWDIVVDNCAICR
Sbjct: 4   LDSDVPMVPAGEPSSSAGPS---------SKKPKRFEIKKWNAVALWAWDIVVDNCAICR 54

Query: 85  NHIMDLCIECQANQASATSEECTVAWGV 2
           NHIMDLCIECQANQASATSEECTVAWGV
Sbjct: 55  NHIMDLCIECQANQASATSEECTVAWGV 82


Top