BLASTX nr result

ID: Bupleurum21_contig00020395 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020395
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282892.1| PREDICTED: uncharacterized protein LOC100267...    99   3e-19
emb|CAN83345.1| hypothetical protein VITISV_042276 [Vitis vinifera]    99   3e-19
ref|XP_002510189.1| protein binding protein, putative [Ricinus c...    97   2e-18
emb|CBI19496.3| unnamed protein product [Vitis vinifera]               92   6e-17
emb|CAI30139.1| RING-finger domain protein [Zinnia violacea]           89   5e-16

>ref|XP_002282892.1| PREDICTED: uncharacterized protein LOC100267740 [Vitis vinifera]
          Length = 734

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 55/87 (63%), Positives = 65/87 (74%), Gaps = 6/87 (6%)
 Frame = -1

Query: 257 QGHRLSHSRSVALL-----GTFGIPHSLRNLAAGTEGRGRLMSEQIRNVLAQMRRGEGLR 93
           QGH  S+ RS  L+     G  GIP+SLR LAA +EGR RL+SE IRNVL  MRRGE LR
Sbjct: 550 QGHHQSYPRSALLMERHGDGVLGIPYSLRTLAAASEGRSRLVSE-IRNVLDLMRRGEDLR 608

Query: 92  FEDIMILDQSGYFGMSD-HDGHRDMRI 15
           FED+MILDQS +FG++D HD HRDMR+
Sbjct: 609 FEDVMILDQSVFFGVADIHDRHRDMRL 635


>emb|CAN83345.1| hypothetical protein VITISV_042276 [Vitis vinifera]
          Length = 1022

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 55/87 (63%), Positives = 65/87 (74%), Gaps = 6/87 (6%)
 Frame = -1

Query: 257 QGHRLSHSRSVALL-----GTFGIPHSLRNLAAGTEGRGRLMSEQIRNVLAQMRRGEGLR 93
           QGH  S+ RS  L+     G  GIP+SLR LAA +EGR RL+SE IRNVL  MRRGE LR
Sbjct: 550 QGHHQSYPRSALLMERHGDGVLGIPYSLRTLAAASEGRSRLVSE-IRNVLDLMRRGEDLR 608

Query: 92  FEDIMILDQSGYFGMSD-HDGHRDMRI 15
           FED+MILDQS +FG++D HD HRDMR+
Sbjct: 609 FEDVMILDQSVFFGVADIHDRHRDMRL 635


>ref|XP_002510189.1| protein binding protein, putative [Ricinus communis]
           gi|223550890|gb|EEF52376.1| protein binding protein,
           putative [Ricinus communis]
          Length = 709

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 50/87 (57%), Positives = 63/87 (72%), Gaps = 6/87 (6%)
 Frame = -1

Query: 257 QGHRLSHSRSVALL-----GTFGIPHSLRNLAAGTEGRGRLMSEQIRNVLAQMRRGEGLR 93
           QGH  S+ RS + +     G  GIP+ LR LAA ++GR RL+  +IRNVL  MRRGE LR
Sbjct: 525 QGHHQSYPRSASWMERQGEGVLGIPYPLRTLAANSDGRSRLLVSEIRNVLDLMRRGESLR 584

Query: 92  FEDIMILDQSGYFGMSD-HDGHRDMRI 15
           FED+MILDQS +FG++D HD HRDMR+
Sbjct: 585 FEDVMILDQSVFFGVADIHDRHRDMRL 611


>emb|CBI19496.3| unnamed protein product [Vitis vinifera]
          Length = 172

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 48/68 (70%), Positives = 56/68 (82%), Gaps = 1/68 (1%)
 Frame = -1

Query: 215 GTFGIPHSLRNLAAGTEGRGRLMSEQIRNVLAQMRRGEGLRFEDIMILDQSGYFGMSD-H 39
           G  GIP+SLR LAA +EGR RL+SE IRNVL  MRRGE LRFED+MILDQS +FG++D H
Sbjct: 7   GVLGIPYSLRTLAAASEGRSRLVSE-IRNVLDLMRRGEDLRFEDVMILDQSVFFGVADIH 65

Query: 38  DGHRDMRI 15
           D HRDMR+
Sbjct: 66  DRHRDMRL 73


>emb|CAI30139.1| RING-finger domain protein [Zinnia violacea]
          Length = 463

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 53/93 (56%), Positives = 62/93 (66%), Gaps = 8/93 (8%)
 Frame = -1

Query: 269 LPAGQGHRLSHSRSVALLG-----TFGIPHSLRNLAAGTEGRGRLMSE--QIRNVLAQMR 111
           +P GQ H    SRS  LLG      F  PH  R     +EGRGRL+SE  QIRNVL  MR
Sbjct: 274 VPPGQ-HNQPLSRSSLLLGRQLEGVFAFPHHSRTATPNSEGRGRLVSEIRQIRNVLDLMR 332

Query: 110 RGEGLRFEDIMILDQSGYFGMSD-HDGHRDMRI 15
           RGE LRFED+MILDQS ++G++D HD HRDMR+
Sbjct: 333 RGEPLRFEDLMILDQSVFYGVADIHDRHRDMRL 365


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