BLASTX nr result

ID: Bupleurum21_contig00020367 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020367
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275681.2| PREDICTED: uncharacterized protein LOC100247...    86   2e-15
emb|CAN73103.1| hypothetical protein VITISV_042892 [Vitis vinifera]    86   2e-15
ref|XP_002307139.1| predicted protein [Populus trichocarpa] gi|2...    74   1e-11
ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|2...    70   1e-10
emb|CBI21533.3| unnamed protein product [Vitis vinifera]               68   7e-10

>ref|XP_002275681.2| PREDICTED: uncharacterized protein LOC100247348 [Vitis vinifera]
          Length = 3288

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 53/127 (41%), Positives = 82/127 (64%), Gaps = 7/127 (5%)
 Frame = -3

Query: 397 RLFSNTSPSLLS--VEDKFSGMDNMSYDEFPRLQGFRDKTGGCK--AFLSGFSTGSQIVE 230
           ++FSN   S +S  +++ FS  D++  +E  ++Q    +  G +    LSGFS  S++V+
Sbjct: 612 QVFSNGHNSNISTVMDEIFSVRDDIESNELQQVQYRNLQFKGAQHGLHLSGFSAASKMVD 671

Query: 229 AKYPSS-ILSHATRKLFLPTQRFEEDNILCFSAFGITRLIKQRNR--ERSSQIVYSSLHV 59
            ++PSS +LSH  RK+FLPT +F ED+  CFS  GITRLIK++N   ++S QI++S LHV
Sbjct: 672 ERFPSSGLLSHPMRKIFLPTNKFSEDDFFCFSPLGITRLIKKQNSKGKKSFQILHSYLHV 731

Query: 58  GSATIND 38
            S   +D
Sbjct: 732 DSVVNDD 738


>emb|CAN73103.1| hypothetical protein VITISV_042892 [Vitis vinifera]
          Length = 995

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 53/127 (41%), Positives = 82/127 (64%), Gaps = 7/127 (5%)
 Frame = -3

Query: 397 RLFSNTSPSLLS--VEDKFSGMDNMSYDEFPRLQGFRDKTGGCK--AFLSGFSTGSQIVE 230
           ++FSN   S +S  +++ FS  D++  +E  ++Q    +  G +    LSGFS  S++V+
Sbjct: 612 QVFSNGHNSNISTVMDEIFSVRDDIESNELQQVQYRNLQFKGAQHGLHLSGFSAASKMVD 671

Query: 229 AKYPSS-ILSHATRKLFLPTQRFEEDNILCFSAFGITRLIKQRNR--ERSSQIVYSSLHV 59
            ++PSS +LSH  RK+FLPT +F ED+  CFS  GITRLIK++N   ++S QI++S LHV
Sbjct: 672 ERFPSSGLLSHPMRKIFLPTNKFSEDDFFCFSPLGITRLIKKQNSKGKKSFQILHSYLHV 731

Query: 58  GSATIND 38
            S   +D
Sbjct: 732 DSVVNDD 738


>ref|XP_002307139.1| predicted protein [Populus trichocarpa] gi|222856588|gb|EEE94135.1|
           predicted protein [Populus trichocarpa]
          Length = 814

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 44/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
 Frame = -3

Query: 364 SVEDKFSGMDNMSYDEFPRLQGFRDKTGGCK-AFLSGFSTGSQIVEAKYPSSILSHATRK 188
           +  +KFS +D    +   ++Q       GC+   LSGFS  +  V   +     SH  RK
Sbjct: 568 TTNEKFSFLDYAGKNTLEKIQNLNHH--GCEDLLLSGFSEIA--VHTFHDREASSHLVRK 623

Query: 187 LFLPTQRFEEDNILCFSAFGITRLIKQRN--RERSSQIVYSSLHVGSATINDICLD 26
           +FLPT+RF ED+ +CFS  GITRL+K+ +    R++Q+V+ +LH  SA  +D CL+
Sbjct: 624 VFLPTERFNEDDYICFSPMGITRLMKKHDAKNHRTTQVVHFNLHTSSAVHDDRCLN 679


>ref|XP_002310617.1| predicted protein [Populus trichocarpa] gi|222853520|gb|EEE91067.1|
           predicted protein [Populus trichocarpa]
          Length = 920

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
 Frame = -3

Query: 280 GCKAFLSGFSTGSQIVEAKYPSSILSHATRKLFLPTQRFEEDNILCFSAFGITRLIKQRN 101
           GC+  ++GFS  +      + S + SH  RK+FLPT R  ED+ +CFS  G+TRLIK+ +
Sbjct: 597 GCEDLMNGFSEIA--THTFHDSEVCSHLMRKVFLPTNRSSEDDYICFSPMGVTRLIKKHD 654

Query: 100 RERSS--QIVYSSLHVGSATINDICLD 26
            +  S  Q+V+ ++H  SA ++D CL+
Sbjct: 655 AKSQSTTQLVHFNMHTSSAVLDDRCLN 681


>emb|CBI21533.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 35/66 (53%), Positives = 48/66 (72%), Gaps = 3/66 (4%)
 Frame = -3

Query: 226 KYPSS-ILSHATRKLFLPTQRFEEDNILCFSAFGITRLIKQRNR--ERSSQIVYSSLHVG 56
           ++PSS +LSH  RK+FLPT +F ED+  CFS  GITRLIK++N   ++S QI++S LHV 
Sbjct: 422 RFPSSGLLSHPMRKIFLPTNKFSEDDFFCFSPLGITRLIKKQNSKGKKSFQILHSYLHVD 481

Query: 55  SATIND 38
           S   +D
Sbjct: 482 SVVNDD 487


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