BLASTX nr result

ID: Bupleurum21_contig00020364 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020364
         (397 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26076.3| unnamed protein product [Vitis vinifera]              129   3e-28
ref|XP_002273386.1| PREDICTED: uncharacterized protein LOC100261...   129   3e-28
emb|CAN83593.1| hypothetical protein VITISV_037723 [Vitis vinifera]   128   4e-28
gb|AAO27366.1| rapid alkalinization factor 1 precursor [Populus ...   118   4e-25
ref|XP_002330157.1| predicted protein [Populus trichocarpa] gi|1...   118   4e-25

>emb|CBI26076.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score =  129 bits (323), Expect = 3e-28
 Identities = 59/102 (57%), Positives = 82/102 (80%), Gaps = 1/102 (0%)
 Frame = +3

Query: 93  MATSSGFIALLALLVINIMMISLSVEASGSH-QNSVGWMPTRSGCRGTVAECLSGEEEFE 269
           M  SS F+ + A++ +++++ S +V+ SG H Q  +GW+P RS C+G++AECL+GEE FE
Sbjct: 35  MGNSSAFVLICAIMAVHMVLTSSAVDFSGDHLQFQLGWIPARSACQGSIAECLAGEE-FE 93

Query: 270 LDSESNRRILATSKYISYGALQRNNVPCSQRGASYYNCKQGA 395
           +DSE NRRILA+ +YISYGAL RN+VPCS+RGASYYNC+ GA
Sbjct: 94  MDSEINRRILASKRYISYGALSRNSVPCSRRGASYYNCRPGA 135


>ref|XP_002273386.1| PREDICTED: uncharacterized protein LOC100261311 [Vitis vinifera]
          Length = 118

 Score =  129 bits (323), Expect = 3e-28
 Identities = 59/102 (57%), Positives = 82/102 (80%), Gaps = 1/102 (0%)
 Frame = +3

Query: 93  MATSSGFIALLALLVINIMMISLSVEASGSH-QNSVGWMPTRSGCRGTVAECLSGEEEFE 269
           M  SS F+ + A++ +++++ S +V+ SG H Q  +GW+P RS C+G++AECL+GEE FE
Sbjct: 1   MGNSSAFVLICAIMAVHMVLTSSAVDFSGDHLQFQLGWIPARSACQGSIAECLAGEE-FE 59

Query: 270 LDSESNRRILATSKYISYGALQRNNVPCSQRGASYYNCKQGA 395
           +DSE NRRILA+ +YISYGAL RN+VPCS+RGASYYNC+ GA
Sbjct: 60  MDSEINRRILASKRYISYGALSRNSVPCSRRGASYYNCRPGA 101


>emb|CAN83593.1| hypothetical protein VITISV_037723 [Vitis vinifera]
          Length = 118

 Score =  128 bits (322), Expect = 4e-28
 Identities = 59/102 (57%), Positives = 82/102 (80%), Gaps = 1/102 (0%)
 Frame = +3

Query: 93  MATSSGFIALLALLVINIMMISLSVEASGSH-QNSVGWMPTRSGCRGTVAECLSGEEEFE 269
           M  SS F+ + A++ +++++ S +V+ SG H Q  +GW+P RS C+G++AECL+GEE FE
Sbjct: 1   MXNSSAFVLICAIMAVHMVLTSSAVDFSGDHLQFQLGWIPARSACQGSIAECLAGEE-FE 59

Query: 270 LDSESNRRILATSKYISYGALQRNNVPCSQRGASYYNCKQGA 395
           +DSE NRRILA+ +YISYGAL RN+VPCS+RGASYYNC+ GA
Sbjct: 60  MDSEINRRILASKRYISYGALSRNSVPCSRRGASYYNCRPGA 101


>gb|AAO27366.1| rapid alkalinization factor 1 precursor [Populus trichocarpa x
           Populus deltoides]
          Length = 120

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/101 (58%), Positives = 81/101 (80%), Gaps = 3/101 (2%)
 Frame = +3

Query: 102 SSGFIALLALLVINIMMISLSVEASGSHQNSVGWMP-TRSG-CRGTVAECLSGE-EEFEL 272
           SS F+    +L++  M +S +V+ SG H   +GW+P TRS  C+G++AEC++ + EEFE+
Sbjct: 5   SSWFLISATILILMAMGLSSTVQGSGDHH--LGWIPATRSSVCKGSIAECMAEDGEEFEM 62

Query: 273 DSESNRRILATSKYISYGALQRNNVPCSQRGASYYNCKQGA 395
           D+E NRRILAT+KY+SYGALQRNNVPCS+RGASYYNC++GA
Sbjct: 63  DTEINRRILATTKYVSYGALQRNNVPCSRRGASYYNCQRGA 103


>ref|XP_002330157.1| predicted protein [Populus trichocarpa] gi|118484425|gb|ABK94089.1|
           unknown [Populus trichocarpa]
           gi|222871613|gb|EEF08744.1| predicted protein [Populus
           trichocarpa]
          Length = 120

 Score =  118 bits (296), Expect = 4e-25
 Identities = 59/101 (58%), Positives = 81/101 (80%), Gaps = 3/101 (2%)
 Frame = +3

Query: 102 SSGFIALLALLVINIMMISLSVEASGSHQNSVGWMP-TRSG-CRGTVAECLSGE-EEFEL 272
           SS F+    +L++  M +S +V+ SG H   +GW+P TRS  C+G++AEC++ + EEFE+
Sbjct: 5   SSWFLISATILILMAMGLSSTVQGSGDHH--LGWIPATRSSVCKGSIAECMAEDGEEFEM 62

Query: 273 DSESNRRILATSKYISYGALQRNNVPCSQRGASYYNCKQGA 395
           D+E NRRILAT+KY+SYGALQRNNVPCS+RGASYYNC++GA
Sbjct: 63  DTEINRRILATTKYVSYGALQRNNVPCSRRGASYYNCQRGA 103


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