BLASTX nr result

ID: Bupleurum21_contig00020355 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020355
         (1446 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002275951.1| PREDICTED: RING finger and transmembrane dom...   502   e-140
emb|CBI15794.3| unnamed protein product [Vitis vinifera]              502   e-140
emb|CBI31155.3| unnamed protein product [Vitis vinifera]              495   e-137
ref|XP_002265744.1| PREDICTED: RING finger and transmembrane dom...   495   e-137
ref|XP_003552333.1| PREDICTED: RING finger and transmembrane dom...   492   e-137

>ref|XP_002275951.1| PREDICTED: RING finger and transmembrane domain-containing protein
            2-like [Vitis vinifera]
          Length = 447

 Score =  502 bits (1293), Expect = e-140
 Identities = 242/294 (82%), Positives = 262/294 (89%)
 Frame = +3

Query: 102  QRYGIQQIARWFEQILPFSLLLLVVFIRQHLQGFFGTIWVSAVLFKSNDILRKQTALKGE 281
            QRY IQQ ARW EQILPFSLLLLVVFIRQHLQGFF TIW++AV+FKSNDILRKQTALKGE
Sbjct: 154  QRYDIQQFARWIEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNDILRKQTALKGE 213

Query: 282  RKISVLVCITLMFMLHVISVYWWYQSADXXXXXXXXXXXXXXXFWHAIFVIMVNDTMVRQ 461
            RK+SVL  IT +FMLHVI VYWWY++ D               FWHAIF+IMVNDTMVRQ
Sbjct: 214  RKLSVLTGITAVFMLHVICVYWWYRNNDLLYPLVLLPPKAIPPFWHAIFIIMVNDTMVRQ 273

Query: 462  ASMVFKCILLMYYKNSGGHNYRRQGQMLTLVEYMVLLYRALLPTPVWYRFFLNKEYGSLF 641
            A+M  KCILLMYYKNS G +YR+QGQMLTLVEY++LLYRALLPTPVWYRFFLNKEYGSLF
Sbjct: 274  AAMALKCILLMYYKNSRGRDYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLF 333

Query: 642  SSLTTGLYLTFKLTSIVQKVQLFFAALRALSRKEVHYGSYATSEQVSAAGDLCAICQEKM 821
            SSLTTGLYLTFKLTS+V+KVQ FFAALRALSRKEVHYGSYATSEQV+AAGDLCAICQEKM
Sbjct: 334  SSLTTGLYLTFKLTSVVEKVQSFFAALRALSRKEVHYGSYATSEQVNAAGDLCAICQEKM 393

Query: 822  HAPIFLSCKHIFCEDCVAEWFERERTCPLCRALVRPADIKSYGDGSTSLLFQLF 983
            HAPI L CKHIFCEDCV+EWFERERTCPLCRALV+PADI+SYGDGSTSL FQ+F
Sbjct: 394  HAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADIRSYGDGSTSLFFQIF 447


>emb|CBI15794.3| unnamed protein product [Vitis vinifera]
          Length = 417

 Score =  502 bits (1293), Expect = e-140
 Identities = 242/294 (82%), Positives = 262/294 (89%)
 Frame = +3

Query: 102  QRYGIQQIARWFEQILPFSLLLLVVFIRQHLQGFFGTIWVSAVLFKSNDILRKQTALKGE 281
            QRY IQQ ARW EQILPFSLLLLVVFIRQHLQGFF TIW++AV+FKSNDILRKQTALKGE
Sbjct: 124  QRYDIQQFARWIEQILPFSLLLLVVFIRQHLQGFFVTIWIAAVMFKSNDILRKQTALKGE 183

Query: 282  RKISVLVCITLMFMLHVISVYWWYQSADXXXXXXXXXXXXXXXFWHAIFVIMVNDTMVRQ 461
            RK+SVL  IT +FMLHVI VYWWY++ D               FWHAIF+IMVNDTMVRQ
Sbjct: 184  RKLSVLTGITAVFMLHVICVYWWYRNNDLLYPLVLLPPKAIPPFWHAIFIIMVNDTMVRQ 243

Query: 462  ASMVFKCILLMYYKNSGGHNYRRQGQMLTLVEYMVLLYRALLPTPVWYRFFLNKEYGSLF 641
            A+M  KCILLMYYKNS G +YR+QGQMLTLVEY++LLYRALLPTPVWYRFFLNKEYGSLF
Sbjct: 244  AAMALKCILLMYYKNSRGRDYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLF 303

Query: 642  SSLTTGLYLTFKLTSIVQKVQLFFAALRALSRKEVHYGSYATSEQVSAAGDLCAICQEKM 821
            SSLTTGLYLTFKLTS+V+KVQ FFAALRALSRKEVHYGSYATSEQV+AAGDLCAICQEKM
Sbjct: 304  SSLTTGLYLTFKLTSVVEKVQSFFAALRALSRKEVHYGSYATSEQVNAAGDLCAICQEKM 363

Query: 822  HAPIFLSCKHIFCEDCVAEWFERERTCPLCRALVRPADIKSYGDGSTSLLFQLF 983
            HAPI L CKHIFCEDCV+EWFERERTCPLCRALV+PADI+SYGDGSTSL FQ+F
Sbjct: 364  HAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADIRSYGDGSTSLFFQIF 417


>emb|CBI31155.3| unnamed protein product [Vitis vinifera]
          Length = 418

 Score =  495 bits (1274), Expect = e-137
 Identities = 237/294 (80%), Positives = 260/294 (88%)
 Frame = +3

Query: 102  QRYGIQQIARWFEQILPFSLLLLVVFIRQHLQGFFGTIWVSAVLFKSNDILRKQTALKGE 281
            QRY IQQ ARW EQ+LPF+LLLLVVFIRQHLQGFF TIW+SAV+FKSN+ILRKQTALKGE
Sbjct: 125  QRYDIQQAARWIEQVLPFTLLLLVVFIRQHLQGFFVTIWISAVMFKSNEILRKQTALKGE 184

Query: 282  RKISVLVCITLMFMLHVISVYWWYQSADXXXXXXXXXXXXXXXFWHAIFVIMVNDTMVRQ 461
            RKISVLV I+L+F LHV  VYWWY + D               FWHAIF+IMVNDT+VRQ
Sbjct: 185  RKISVLVGISLVFTLHVAGVYWWYHNGDLLYPLIMLPPKAIPPFWHAIFIIMVNDTLVRQ 244

Query: 462  ASMVFKCILLMYYKNSGGHNYRRQGQMLTLVEYMVLLYRALLPTPVWYRFFLNKEYGSLF 641
            A+MVFKCILLMYYKNS G NYR+QGQ+LTLVEY +LLYRALLP PVWYRFFLNKEYGSLF
Sbjct: 245  AAMVFKCILLMYYKNSRGRNYRKQGQLLTLVEYTLLLYRALLPAPVWYRFFLNKEYGSLF 304

Query: 642  SSLTTGLYLTFKLTSIVQKVQLFFAALRALSRKEVHYGSYATSEQVSAAGDLCAICQEKM 821
            SSL TGLYLTFKLTS+V+KVQ FFAAL+ALSRKEVHYG+YATSEQV+AAGDLCAICQEKM
Sbjct: 305  SSLMTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVNAAGDLCAICQEKM 364

Query: 822  HAPIFLSCKHIFCEDCVAEWFERERTCPLCRALVRPADIKSYGDGSTSLLFQLF 983
            HAPI L CKHIFCEDCV+EWFERERTCPLCRALV+PAD++SYGDGSTSL FQLF
Sbjct: 365  HAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSYGDGSTSLFFQLF 418


>ref|XP_002265744.1| PREDICTED: RING finger and transmembrane domain-containing protein
            2-like [Vitis vinifera]
          Length = 462

 Score =  495 bits (1274), Expect = e-137
 Identities = 237/294 (80%), Positives = 260/294 (88%)
 Frame = +3

Query: 102  QRYGIQQIARWFEQILPFSLLLLVVFIRQHLQGFFGTIWVSAVLFKSNDILRKQTALKGE 281
            QRY IQQ ARW EQ+LPF+LLLLVVFIRQHLQGFF TIW+SAV+FKSN+ILRKQTALKGE
Sbjct: 169  QRYDIQQAARWIEQVLPFTLLLLVVFIRQHLQGFFVTIWISAVMFKSNEILRKQTALKGE 228

Query: 282  RKISVLVCITLMFMLHVISVYWWYQSADXXXXXXXXXXXXXXXFWHAIFVIMVNDTMVRQ 461
            RKISVLV I+L+F LHV  VYWWY + D               FWHAIF+IMVNDT+VRQ
Sbjct: 229  RKISVLVGISLVFTLHVAGVYWWYHNGDLLYPLIMLPPKAIPPFWHAIFIIMVNDTLVRQ 288

Query: 462  ASMVFKCILLMYYKNSGGHNYRRQGQMLTLVEYMVLLYRALLPTPVWYRFFLNKEYGSLF 641
            A+MVFKCILLMYYKNS G NYR+QGQ+LTLVEY +LLYRALLP PVWYRFFLNKEYGSLF
Sbjct: 289  AAMVFKCILLMYYKNSRGRNYRKQGQLLTLVEYTLLLYRALLPAPVWYRFFLNKEYGSLF 348

Query: 642  SSLTTGLYLTFKLTSIVQKVQLFFAALRALSRKEVHYGSYATSEQVSAAGDLCAICQEKM 821
            SSL TGLYLTFKLTS+V+KVQ FFAAL+ALSRKEVHYG+YATSEQV+AAGDLCAICQEKM
Sbjct: 349  SSLMTGLYLTFKLTSVVEKVQSFFAALKALSRKEVHYGAYATSEQVNAAGDLCAICQEKM 408

Query: 822  HAPIFLSCKHIFCEDCVAEWFERERTCPLCRALVRPADIKSYGDGSTSLLFQLF 983
            HAPI L CKHIFCEDCV+EWFERERTCPLCRALV+PAD++SYGDGSTSL FQLF
Sbjct: 409  HAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSYGDGSTSLFFQLF 462


>ref|XP_003552333.1| PREDICTED: RING finger and transmembrane domain-containing protein
            2-like [Glycine max]
          Length = 440

 Score =  492 bits (1267), Expect = e-137
 Identities = 235/294 (79%), Positives = 261/294 (88%)
 Frame = +3

Query: 102  QRYGIQQIARWFEQILPFSLLLLVVFIRQHLQGFFGTIWVSAVLFKSNDILRKQTALKGE 281
            QRY IQ  ARW EQ+LPFSLLLLVVFIRQHLQGFF TIW++AVLFKSNDILRKQTALKGE
Sbjct: 147  QRYDIQHAARWIEQVLPFSLLLLVVFIRQHLQGFFVTIWIAAVLFKSNDILRKQTALKGE 206

Query: 282  RKISVLVCITLMFMLHVISVYWWYQSADXXXXXXXXXXXXXXXFWHAIFVIMVNDTMVRQ 461
            RK+ VLV I++ F LHV+ VYWWYQ+ D               FWHAIF+IMVNDT+VRQ
Sbjct: 207  RKMLVLVGISVGFALHVVGVYWWYQNDDLMYPLIMLPPKDIPPFWHAIFIIMVNDTLVRQ 266

Query: 462  ASMVFKCILLMYYKNSGGHNYRRQGQMLTLVEYMVLLYRALLPTPVWYRFFLNKEYGSLF 641
            A+MVFKCILLMYYKNS G NYR+QGQMLTLVEY++LLYRALLPTPVWYRFFLNKEYGSLF
Sbjct: 267  AAMVFKCILLMYYKNSRGRNYRKQGQMLTLVEYLLLLYRALLPTPVWYRFFLNKEYGSLF 326

Query: 642  SSLTTGLYLTFKLTSIVQKVQLFFAALRALSRKEVHYGSYATSEQVSAAGDLCAICQEKM 821
            SSL TGLYLTFKLTS+V+KVQ FFAA++ALSRKE+HYG+YATSEQV+AAGDLCAICQEKM
Sbjct: 327  SSLMTGLYLTFKLTSVVEKVQSFFAAVKALSRKEMHYGAYATSEQVNAAGDLCAICQEKM 386

Query: 822  HAPIFLSCKHIFCEDCVAEWFERERTCPLCRALVRPADIKSYGDGSTSLLFQLF 983
            HAPI L CKHIFCEDCV+EWFERERTCPLCRALV+PAD++S+GDGSTSL FQLF
Sbjct: 387  HAPILLRCKHIFCEDCVSEWFERERTCPLCRALVKPADLRSFGDGSTSLFFQLF 440


Top