BLASTX nr result
ID: Bupleurum21_contig00020348
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Bupleurum21_contig00020348
(674 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI15196.3| unnamed protein product [Vitis vinifera] 299 3e-79
ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containi... 299 3e-79
emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera] 299 3e-79
ref|XP_002310922.1| predicted protein [Populus trichocarpa] gi|2... 281 6e-74
ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containi... 258 1e-66
>emb|CBI15196.3| unnamed protein product [Vitis vinifera]
Length = 467
Score = 299 bits (766), Expect = 3e-79
Identities = 146/225 (64%), Positives = 179/225 (79%), Gaps = 1/225 (0%)
Frame = +2
Query: 2 KARQVFDELSERNVVTWNSLLAGYVRWGEMDLACIFFDDMPERNVVSWTTMIAGLARNGQ 181
KAR+VFDE+ +RN+V+WNSLLAGYVR G++D A FD+MPERNVVSWTTMIAG A+ G+
Sbjct: 86 KARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGR 145
Query: 182 CKRALSLFRDMWIACVKFDRATLVAALSACAELGDLRMGRWIHSYIHGKLHVESEEMMVP 361
CK+AL LF +M A VK D+ LVAALSACAELGDL++G WIHSYI +LH ++ ++V
Sbjct: 146 CKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVS 205
Query: 362 LHNALVHMYASCGFIDDSFKVFKAMPKRSTISWTSMIMSFAKQGRGEEALEVFRWMQRHG 541
L+N+L+HMYASCG ID ++KVF M +RSTISWTSMI FAKQG EEAL VF+WMQR G
Sbjct: 206 LNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLG 265
Query: 542 DKDVRPDAITMIAVLSACSHAGLVEEGRYFFNCI-QTWGIQPRIE 673
+ RPD IT I VL ACSHAG V++GR+FF C+ + WGI PRIE
Sbjct: 266 TDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIE 310
Score = 63.5 bits (153), Expect = 4e-08
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Frame = +2
Query: 53 NSLLAGYVRWGEMDLACIFFDDMPERNVVSWTTMIAGLARNGQCKRALSLFRDMWIACVK 232
NSL+ Y G +D A F M +R+ +SWT+MI G A+ G + AL +F+ W+ +
Sbjct: 208 NSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQ--WMQRLG 265
Query: 233 FDRA-----TLVAALSACAELGDLRMGRWIHSYIHGKLHVESEEMMVPLHNALVHMYASC 397
D T + L AC+ G + GR ++ K + + + +V + +
Sbjct: 266 TDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPR---IEHYGCMVDLLSRA 322
Query: 398 GFIDDSFKVFKAMP-KRSTISWTSMI 472
GF+D++ ++ ++MP K + W +++
Sbjct: 323 GFLDEAHRLIESMPMKPNDAVWGALL 348
>ref|XP_002281803.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Vitis vinifera]
Length = 553
Score = 299 bits (766), Expect = 3e-79
Identities = 146/225 (64%), Positives = 179/225 (79%), Gaps = 1/225 (0%)
Frame = +2
Query: 2 KARQVFDELSERNVVTWNSLLAGYVRWGEMDLACIFFDDMPERNVVSWTTMIAGLARNGQ 181
KAR+VFDE+ +RN+V+WNSLLAGYVR G++D A FD+MPERNVVSWTTMIAG A+ G+
Sbjct: 172 KARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGR 231
Query: 182 CKRALSLFRDMWIACVKFDRATLVAALSACAELGDLRMGRWIHSYIHGKLHVESEEMMVP 361
CK+AL LF +M A VK D+ LVAALSACAELGDL++G WIHSYI +LH ++ ++V
Sbjct: 232 CKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVS 291
Query: 362 LHNALVHMYASCGFIDDSFKVFKAMPKRSTISWTSMIMSFAKQGRGEEALEVFRWMQRHG 541
L+N+L+HMYASCG ID ++KVF M +RSTISWTSMI FAKQG EEAL VF+WMQR G
Sbjct: 292 LNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLG 351
Query: 542 DKDVRPDAITMIAVLSACSHAGLVEEGRYFFNCI-QTWGIQPRIE 673
+ RPD IT I VL ACSHAG V++GR+FF C+ + WGI PRIE
Sbjct: 352 TDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIE 396
Score = 73.6 bits (179), Expect = 3e-11
Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 7/220 (3%)
Frame = +2
Query: 5 ARQVFDELSERNVVTWNSLLAGYVRWGEMDLACIFFDDM----PERNVVSWTTMIAGLAR 172
A +VF+ + + WN ++ G+ + ++ M E N +++ +I G AR
Sbjct: 69 AHKVFERIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCAR 128
Query: 173 NGQCKRALSLFRDMWI--ACVK-FDRATLVAALSACAELGDLRMGRWIHSYIHGKLHVES 343
+ + + + C F R +LV + +R R ++ E
Sbjct: 129 SRLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKAR--------RVFDEI 180
Query: 344 EEMMVPLHNALVHMYASCGFIDDSFKVFKAMPKRSTISWTSMIMSFAKQGRGEEALEVFR 523
+ + N+L+ Y CG +D + ++F MP+R+ +SWT+MI A+ GR ++AL +F
Sbjct: 181 VDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFH 240
Query: 524 WMQRHGDKDVRPDAITMIAVLSACSHAGLVEEGRYFFNCI 643
M+R G V+ D + ++A LSAC+ G ++ G + + I
Sbjct: 241 EMRRAG---VKLDQVALVAALSACAELGDLKLGTWIHSYI 277
Score = 63.5 bits (153), Expect = 4e-08
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Frame = +2
Query: 53 NSLLAGYVRWGEMDLACIFFDDMPERNVVSWTTMIAGLARNGQCKRALSLFRDMWIACVK 232
NSL+ Y G +D A F M +R+ +SWT+MI G A+ G + AL +F+ W+ +
Sbjct: 294 NSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQ--WMQRLG 351
Query: 233 FDRA-----TLVAALSACAELGDLRMGRWIHSYIHGKLHVESEEMMVPLHNALVHMYASC 397
D T + L AC+ G + GR ++ K + + + +V + +
Sbjct: 352 TDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPR---IEHYGCMVDLLSRA 408
Query: 398 GFIDDSFKVFKAMP-KRSTISWTSMI 472
GF+D++ ++ ++MP K + W +++
Sbjct: 409 GFLDEAHRLIESMPMKPNDAVWGALL 434
>emb|CAN66661.1| hypothetical protein VITISV_031721 [Vitis vinifera]
Length = 569
Score = 299 bits (766), Expect = 3e-79
Identities = 146/225 (64%), Positives = 179/225 (79%), Gaps = 1/225 (0%)
Frame = +2
Query: 2 KARQVFDELSERNVVTWNSLLAGYVRWGEMDLACIFFDDMPERNVVSWTTMIAGLARNGQ 181
KAR+VFDE+ +RN+V+WNSLLAGYVR G++D A FD+MPERNVVSWTTMIAG A+ G+
Sbjct: 188 KARRVFDEIVDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGR 247
Query: 182 CKRALSLFRDMWIACVKFDRATLVAALSACAELGDLRMGRWIHSYIHGKLHVESEEMMVP 361
CK+AL LF +M A VK D+ LVAALSACAELGDL++G WIHSYI +LH ++ ++V
Sbjct: 248 CKQALHLFHEMRRAGVKLDQVALVAALSACAELGDLKLGTWIHSYIDERLHAGNQPLLVS 307
Query: 362 LHNALVHMYASCGFIDDSFKVFKAMPKRSTISWTSMIMSFAKQGRGEEALEVFRWMQRHG 541
L+N+L+HMYASCG ID ++KVF M +RSTISWTSMI FAKQG EEAL VF+WMQR G
Sbjct: 308 LNNSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQWMQRLG 367
Query: 542 DKDVRPDAITMIAVLSACSHAGLVEEGRYFFNCI-QTWGIQPRIE 673
+ RPD IT I VL ACSHAG V++GR+FF C+ + WGI PRIE
Sbjct: 368 TDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPRIE 412
Score = 73.9 bits (180), Expect = 3e-11
Identities = 55/220 (25%), Positives = 104/220 (47%), Gaps = 7/220 (3%)
Frame = +2
Query: 5 ARQVFDELSERNVVTWNSLLAGYVRWGEMDLACIFFDDM----PERNVVSWTTMIAGLAR 172
A +VF+ + + WN ++ G+ + ++ M E N +++ +I G AR
Sbjct: 85 AHKVFERIENPSTTVWNQMIRGHSQSETPHKLVELYNRMVEAEAEPNEFTYSFLIGGCAR 144
Query: 173 NGQCKRALSLFRDMWI--ACVK-FDRATLVAALSACAELGDLRMGRWIHSYIHGKLHVES 343
+ + + + C F R +LV + +R R ++ E
Sbjct: 145 SXLLREGEQVHGRVVANGYCTNVFVRTSLVNLYAIAGGYDGVRKAR--------RVFDEI 196
Query: 344 EEMMVPLHNALVHMYASCGFIDDSFKVFKAMPKRSTISWTSMIMSFAKQGRGEEALEVFR 523
+ + N+L+ Y CG +D + ++F MP+R+ +SWT+MI A+ GR ++AL +F
Sbjct: 197 VDRNIVSWNSLLAGYVRCGDVDGARRIFDEMPERNVVSWTTMIAGCAQIGRCKQALHLFH 256
Query: 524 WMQRHGDKDVRPDAITMIAVLSACSHAGLVEEGRYFFNCI 643
M+R G V+ D + ++A LSAC+ G ++ G + + I
Sbjct: 257 EMRRAG---VKLDQVALVAALSACAELGDLKLGTWIHSYI 293
Score = 63.2 bits (152), Expect = 5e-08
Identities = 39/146 (26%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Frame = +2
Query: 53 NSLLAGYVRWGEMDLACIFFDDMPERNVVSWTTMIAGLARNGQCKRALSLFRDMWIACVK 232
NSL+ Y G +D A F M +R+ +SWT+MI G A+ G + AL +F+ W+ +
Sbjct: 310 NSLIHMYASCGVIDKAYKVFIGMQQRSTISWTSMITGFAKQGHAEEALGVFQ--WMQRLG 367
Query: 233 FDRA-----TLVAALSACAELGDLRMGRWIHSYIHGKLHVESEEMMVPLHNALVHMYASC 397
D T + L AC+ G + GR ++ K + + + +V + +
Sbjct: 368 TDEGRPDGITFIGVLCACSHAGFVDQGRHFFECMNKKWGIVPR---IEHYGCMVDLLSRA 424
Query: 398 GFIDDSFKVFKAMP-KRSTISWTSMI 472
GF+D++ ++ ++MP K + W +++
Sbjct: 425 GFLDEAHRLXESMPMKPNDAVWGALL 450
>ref|XP_002310922.1| predicted protein [Populus trichocarpa] gi|222850742|gb|EEE88289.1|
predicted protein [Populus trichocarpa]
Length = 554
Score = 281 bits (720), Expect = 6e-74
Identities = 137/224 (61%), Positives = 175/224 (78%), Gaps = 1/224 (0%)
Frame = +2
Query: 5 ARQVFDELSERNVVTWNSLLAGYVRWGEMDLACIFFDDMPERNVVSWTTMIAGLARNGQC 184
AR+VFD++SERNVV WNS+LAGY+R G +D A F +MPERNVVSWTTMI+G A+NG+C
Sbjct: 186 ARKVFDDMSERNVVCWNSMLAGYMRRGNLDGARRIFYEMPERNVVSWTTMISGYAKNGKC 245
Query: 185 KRALSLFRDMWIACVKFDRATLVAALSACAELGDLRMGRWIHSYIHGKLHVESEEMMVPL 364
K+AL+LF M A V+ D+ L+AAL+ACAELGDL+MG WIHSYI ++ ++V L
Sbjct: 246 KQALNLFDQMRKAGVELDQVVLLAALTACAELGDLKMGMWIHSYIQDTFVGSNQRVLVSL 305
Query: 365 HNALVHMYASCGFIDDSFKVFKAMPKRSTISWTSMIMSFAKQGRGEEALEVFRWMQRHGD 544
+NAL+HMYASCG ID++++VF+ MP+RS +SWTS+I +FAKQG + LE+FR MQR G
Sbjct: 306 NNALIHMYASCGMIDEAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGT 365
Query: 545 KDVRPDAITMIAVLSACSHAGLVEEGRYFF-NCIQTWGIQPRIE 673
+ RPD IT I VL ACSHAGLV+EGR F + IQ WGI+PRIE
Sbjct: 366 SEARPDGITFIGVLCACSHAGLVDEGRQLFKDMIQRWGIKPRIE 409
Score = 60.1 bits (144), Expect = 4e-07
Identities = 45/184 (24%), Positives = 85/184 (46%), Gaps = 4/184 (2%)
Frame = +2
Query: 53 NSLLAGYVRWGEMDLACIFFDDMPERNVVSWTTMIAGLARNGQCKRALSLFRDMW---IA 223
N+L+ Y G +D A F MPER+ VSWT++I A+ G + L +FR M +
Sbjct: 307 NALIHMYASCGMIDEAYEVFRWMPERSAVSWTSLITAFAKQGYAQAVLEIFRSMQRLGTS 366
Query: 224 CVKFDRATLVAALSACAELGDLRMGRWIHSYIHGKLHVESEEMMVPLHNALVHMYASCGF 403
+ D T + L AC+ G + GR + + + ++ + + +V + + GF
Sbjct: 367 EARPDGITFIGVLCACSHAGLVDEGRQLFKDMIQRWGIKPR---IEHYGCMVDLLSRAGF 423
Query: 404 IDDSFKVFKAMP-KRSTISWTSMIMSFAKQGRGEEALEVFRWMQRHGDKDVRPDAITMIA 580
+D++ ++ MP K + W +++ E A V + + D D ++++A
Sbjct: 424 LDEAQELIATMPVKPNNAVWGALLGGCRFYRNAELASLVSQKLVAEPDPDKAAGYLSLLA 483
Query: 581 VLSA 592
+ A
Sbjct: 484 QVYA 487
>ref|XP_003550788.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g66520-like [Glycine max]
Length = 478
Score = 258 bits (658), Expect = 1e-66
Identities = 131/228 (57%), Positives = 170/228 (74%), Gaps = 4/228 (1%)
Frame = +2
Query: 2 KARQVFDELSERNVVTWNSLLAGYVRWGEMDLACIFFDDMPERNVVSWTTMIAGLARNGQ 181
+AR VFD + +R+VV+WNS+LAGYVR + D A FD MP RNVVSWTTM+AG ARNG+
Sbjct: 94 RARHVFDGMPQRSVVSWNSMLAGYVRCADFDGARRVFDVMPCRNVVSWTTMVAGCARNGK 153
Query: 182 CKRALSLFRDMWIACVKFDRATLVAALSACAELGDLRMGRWIHSYIHGKLHVES-EEMMV 358
++AL LF +M ACV+ D+ LVAALSACAELGDL++GRWIH Y+ + + ++ V
Sbjct: 154 SRQALLLFGEMRRACVELDQVALVAALSACAELGDLKLGRWIHWYVQQRFVARNWQQPSV 213
Query: 359 PLHNALVHMYASCGFIDDSFKVFKAMPKRSTISWTSMIMSFAKQGRGEEALEVFRWMQRH 538
L+NAL+HMYASCG + ++++VF MP++ST+SWTSMIM+FAKQG G+EAL++F+ M
Sbjct: 214 RLNNALIHMYASCGILHEAYQVFVKMPRKSTVSWTSMIMAFAKQGLGKEALDLFKTMLSD 273
Query: 539 GDK--DVRPDAITMIAVLSACSHAGLVEEGRYFFNCIQ-TWGIQPRIE 673
G K VRPD IT I VL ACSHAG V+EG F ++ TWGI P IE
Sbjct: 274 GVKVDGVRPDEITFIGVLCACSHAGFVDEGHQIFASMKHTWGISPSIE 321
Score = 64.3 bits (155), Expect = 2e-08
Identities = 53/206 (25%), Positives = 91/206 (44%), Gaps = 31/206 (15%)
Frame = +2
Query: 143 WTTMIAGLARNGQCKRALSLFRDMWIACVKFDRATLVAALSACAELGDLRMGRWIHSYIH 322
W +I G AR+ +A+ + M + + D T + LSACA G ++ G +H+ +
Sbjct: 9 WNHVIRGYARSHTPWKAVECYTHMVSSKAEPDGFTHSSLLSACARGGLVKEGEQVHATVL 68
Query: 323 GKLHVESEEMMVPLHNALVHMYASCGFIDDSFKVFKAMPKRSTISWTSMIMSF------- 481
K + + V + +L+ YA G ++ + VF MP+RS +SW SM+ +
Sbjct: 69 VKGYCSN----VFVDTSLITFYAGRGGVERARHVFDGMPQRSVVSWNSMLAGYVRCADFD 124
Query: 482 ------------------------AKQGRGEEALEVFRWMQRHGDKDVRPDAITMIAVLS 589
A+ G+ +AL +F M+R V D + ++A LS
Sbjct: 125 GARRVFDVMPCRNVVSWTTMVAGCARNGKSRQALLLFGEMRR---ACVELDQVALVAALS 181
Query: 590 ACSHAGLVEEGRYFFNCIQTWGIQPR 667
AC+ G ++ GR+ W +Q R
Sbjct: 182 ACAELGDLKLGRWIH-----WYVQQR 202