BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020341
         (763 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinen...   403   e-110
ref|XP_002517947.1| pre-mRNA splicing factor, putative [Ricinus ...   398   e-109
ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like...   398   e-109
ref|XP_002442232.1| hypothetical protein SORBIDRAFT_08g016670 [S...   396   e-108
ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like...   396   e-108

>gb|AEY85031.1| putative pre-mRNA splicing factor [Camellia sinensis]
          Length = 1023

 Score =  403 bits (1036), Expect = e-110
 Identities = 207/256 (80%), Positives = 223/256 (87%), Gaps = 2/256 (0%)
 Frame = -1

Query: 763  VPDTLLEKARQEKEHVTALDPTSREAGGSETPWVQT--TDLTAVGEGRETVLSLKLDRVL 590
            VPDTLLEKARQE+EHVTALDP SR AGG+ETPW QT  TDLTAVGEGR TVLSLKLDR+ 
Sbjct: 274  VPDTLLEKARQEQEHVTALDPKSRAAGGTETPWAQTPVTDLTAVGEGRGTVLSLKLDRLS 333

Query: 589  DSVSGLTAVDPKGYLTDLKSMNITSNAEISDIKKVRLLLKSLIQTNPKHPLGWIAAAMLE 410
            DSVSGLT VDPKGYLTDLKSM ITS+AEISDIKK RLLLKS+IQTNPKHP GWIAAA LE
Sbjct: 334  DSVSGLTVVDPKGYLTDLKSMKITSDAEISDIKKARLLLKSVIQTNPKHPPGWIAAARLE 393

Query: 409  EVAGKILVARRLISKGCEECPKSEDVWLEACRLSSPMEXXXXXXXXXXXIPTSVKLWMQA 230
            EVAGKI  AR+LI KGCEECPK+EDVWLEACRLSSP E           IP SVKLWMQA
Sbjct: 394  EVAGKIAAARQLIKKGCEECPKNEDVWLEACRLSSPDEAKAVIAKGVKAIPNSVKLWMQA 453

Query: 229  AKLEQDEESRSRVLRKALEQIPDSVRLWKAVVEVSSEENARVLLHRAVECCPLHVELWLA 50
            AKLE D+ ++SRVLRK LE IPDSVRLWKAVVE+++EE+AR+LL RAVECCPLHVELWLA
Sbjct: 454  AKLEHDDANKSRVLRKGLEHIPDSVRLWKAVVELANEEDARLLLQRAVECCPLHVELWLA 513

Query: 49   LARLETYDSAKKVLNK 2
            LARLETYD+AKKVLNK
Sbjct: 514  LARLETYDNAKKVLNK 529



 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 38/158 (24%), Positives = 73/158 (46%), Gaps = 10/158 (6%)
 Frame = -1

Query: 478  LLKSLIQTNPKHPLGWIAAAMLEEVAGKILVARRLISKGCEECPKSEDVWLEACRL---S 308
            LL+  +   P+  + W+  A  + +AG +  AR ++ +     P SE++WL A +L   +
Sbjct: 670  LLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAFKLEFEN 729

Query: 307  SPMEXXXXXXXXXXXIPTSVKLWMQAAKLEQD---EESRSRVLRKALEQIPDSVRLWKAV 137
               E              + ++WM++A +E++        R+L + L+  P   +LW  +
Sbjct: 730  HEPERARMLLAKARERGGTERVWMKSAIVERELGNTNEERRLLDEGLKLFPSFFKLWLML 789

Query: 136  VEVSSE----ENARVLLHRAVECCPLHVELWLALARLE 35
             ++       E A+      ++ CP  + LWL+LA LE
Sbjct: 790  GQLEERLGNLEQAKEAYESGLKHCPSCIPLWLSLANLE 827


>ref|XP_002517947.1| pre-mRNA splicing factor, putative [Ricinus communis]
            gi|223542929|gb|EEF44465.1| pre-mRNA splicing factor,
            putative [Ricinus communis]
          Length = 1031

 Score =  398 bits (1023), Expect = e-109
 Identities = 203/256 (79%), Positives = 222/256 (86%), Gaps = 2/256 (0%)
 Frame = -1

Query: 763  VPDTLLEKARQEKEHVTALDPTSREAGGSETPWVQT--TDLTAVGEGRETVLSLKLDRVL 590
            VPDTLLEKARQE+EHVTALDP SR AGG+ETPW QT  TDLTAVGEGR TVLSLKLDR+ 
Sbjct: 282  VPDTLLEKARQEQEHVTALDPKSRAAGGAETPWSQTPVTDLTAVGEGRGTVLSLKLDRLS 341

Query: 589  DSVSGLTAVDPKGYLTDLKSMNITSNAEISDIKKVRLLLKSLIQTNPKHPLGWIAAAMLE 410
            DSVSGLT VDPKGYLTDLKSM ITS+AEISDIKK RLLLKS+ QTNPKHP GWIAAA LE
Sbjct: 342  DSVSGLTVVDPKGYLTDLKSMKITSDAEISDIKKARLLLKSVTQTNPKHPPGWIAAARLE 401

Query: 409  EVAGKILVARRLISKGCEECPKSEDVWLEACRLSSPMEXXXXXXXXXXXIPTSVKLWMQA 230
            EVAGKI  AR+LI +GCEECPK+EDVW+EACRL+SP E           IP SVKLW+QA
Sbjct: 402  EVAGKIQAARQLIQRGCEECPKNEDVWIEACRLASPDEAKAVIAKGVKCIPNSVKLWLQA 461

Query: 229  AKLEQDEESRSRVLRKALEQIPDSVRLWKAVVEVSSEENARVLLHRAVECCPLHVELWLA 50
            AKLE D+ ++SRVLRK LE IPDSVRLWKAVVE+++EE+AR LLHRAVECCPLHVELWLA
Sbjct: 462  AKLEHDDVNKSRVLRKGLEHIPDSVRLWKAVVELANEEDARTLLHRAVECCPLHVELWLA 521

Query: 49   LARLETYDSAKKVLNK 2
            LARLETYDSAKKVLN+
Sbjct: 522  LARLETYDSAKKVLNR 537



 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 38/158 (24%), Positives = 76/158 (48%), Gaps = 10/158 (6%)
 Frame = -1

Query: 478  LLKSLIQTNPKHPLGWIAAAMLEEVAGKILVARRLISKGCEECPKSEDVWLEACRL---S 308
            LL+  +   P+  + W+  A  + +AG +  AR ++ +     P SE++WL A +L   +
Sbjct: 678  LLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAFKLEFEN 737

Query: 307  SPMEXXXXXXXXXXXIPTSVKLWMQAAKLEQD---EESRSRVLRKALEQIPDSVRLWKAV 137
               E              + ++WM++A +E++    E   R+L + L++ P   +LW  +
Sbjct: 738  HEPERARMLLAKARERGGTERVWMKSAIVERELGNTEEERRLLDEGLKRFPSFFKLWLML 797

Query: 136  VEVSSE----ENARVLLHRAVECCPLHVELWLALARLE 35
             ++       + A+ +    ++ CP  + LWL+LA LE
Sbjct: 798  GQLEERIFHLDKAKEVYESGLKHCPSCIPLWLSLANLE 835


>ref|XP_004140515.1| PREDICTED: pre-mRNA-processing factor 6-like [Cucumis sativus]
            gi|449514699|ref|XP_004164455.1| PREDICTED:
            pre-mRNA-processing factor 6-like [Cucumis sativus]
          Length = 1023

 Score =  398 bits (1022), Expect = e-109
 Identities = 204/255 (80%), Positives = 220/255 (86%), Gaps = 2/255 (0%)
 Frame = -1

Query: 763  VPDTLLEKARQEKEHVTALDPTSREAGGSETPWVQT--TDLTAVGEGRETVLSLKLDRVL 590
            VPDTLLEKARQE+EHVTALDP SR AGG+ETPW QT  TDLTAVGEGR TVLSLKLDR+ 
Sbjct: 274  VPDTLLEKARQEQEHVTALDPKSRAAGGTETPWAQTPVTDLTAVGEGRGTVLSLKLDRLS 333

Query: 589  DSVSGLTAVDPKGYLTDLKSMNITSNAEISDIKKVRLLLKSLIQTNPKHPLGWIAAAMLE 410
            DSVSGLT VDPKGYLTDLKSM ITS+AEISDIKK RLLLKS+ QTNPKHP GWIAAA LE
Sbjct: 334  DSVSGLTVVDPKGYLTDLKSMKITSDAEISDIKKARLLLKSVTQTNPKHPPGWIAAARLE 393

Query: 409  EVAGKILVARRLISKGCEECPKSEDVWLEACRLSSPMEXXXXXXXXXXXIPTSVKLWMQA 230
            EVAGKI  AR+LI KGCEECPK+EDVWLEACRL+SP E           IP SVKLW+QA
Sbjct: 394  EVAGKIQAARQLIQKGCEECPKNEDVWLEACRLASPDEAKAVIAKGAKSIPNSVKLWLQA 453

Query: 229  AKLEQDEESRSRVLRKALEQIPDSVRLWKAVVEVSSEENARVLLHRAVECCPLHVELWLA 50
            AKLE D  ++SRVLRK LE IPDSVRLWKAVVE+++EE+AR+LLHRAVECCPLHVELWLA
Sbjct: 454  AKLEHDTANKSRVLRKGLEHIPDSVRLWKAVVELANEEDARLLLHRAVECCPLHVELWLA 513

Query: 49   LARLETYDSAKKVLN 5
            LARLETYD AKKVLN
Sbjct: 514  LARLETYDRAKKVLN 528



 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 10/158 (6%)
 Frame = -1

Query: 478  LLKSLIQTNPKHPLGWIAAAMLEEVAGKILVARRLISKGCEECPKSEDVWLEACRL---S 308
            LL+  +   P+  + W+  A  + +AG +  AR ++ +     P SE++WL A +L   +
Sbjct: 670  LLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARSILQEAYAAIPNSEEIWLAAFKLEFEN 729

Query: 307  SPMEXXXXXXXXXXXIPTSVKLWMQAAKLEQD---EESRSRVLRKALEQIPDSVRLWKAV 137
               E              + ++WM++A +E++    E  S++L + L++ P   +LW  +
Sbjct: 730  HEPERARMLLAKARERGGTERVWMKSAIVERELGNAEEESKLLIEGLKRFPSFFKLWLML 789

Query: 136  VEVSSE----ENARVLLHRAVECCPLHVELWLALARLE 35
             ++       E A+      ++ CP  + LWL+LA LE
Sbjct: 790  GQLEERLKHLEKAKEAYESGLKHCPSCIPLWLSLAHLE 827


>ref|XP_002442232.1| hypothetical protein SORBIDRAFT_08g016670 [Sorghum bicolor]
           gi|241942925|gb|EES16070.1| hypothetical protein
           SORBIDRAFT_08g016670 [Sorghum bicolor]
          Length = 963

 Score =  396 bits (1018), Expect = e-108
 Identities = 201/256 (78%), Positives = 222/256 (86%), Gaps = 2/256 (0%)
 Frame = -1

Query: 763 VPDTLLEKARQEKEHVTALDPTSREAGGSETPWVQT--TDLTAVGEGRETVLSLKLDRVL 590
           VPDTLLEKARQE+EHVTALDP SR AGG+ETPW QT  TDLTAVGEGR TVLSLKLDR+ 
Sbjct: 215 VPDTLLEKARQEQEHVTALDPKSRAAGGTETPWAQTPVTDLTAVGEGRGTVLSLKLDRLS 274

Query: 589 DSVSGLTAVDPKGYLTDLKSMNITSNAEISDIKKVRLLLKSLIQTNPKHPLGWIAAAMLE 410
           DSVSGLT VDPKGYLTDLKSM ITS+AEISDIKK RLLLKS+ QTNPKHP GWIAAA LE
Sbjct: 275 DSVSGLTVVDPKGYLTDLKSMKITSDAEISDIKKARLLLKSVTQTNPKHPPGWIAAARLE 334

Query: 409 EVAGKILVARRLISKGCEECPKSEDVWLEACRLSSPMEXXXXXXXXXXXIPTSVKLWMQA 230
           E+AGK+ VAR+LI +GCEECPK+EDVWLEACRL+SP E           IP SVKLW+QA
Sbjct: 335 EIAGKLQVARQLIQRGCEECPKNEDVWLEACRLASPDEAKAVIARGVMSIPNSVKLWLQA 394

Query: 229 AKLEQDEESRSRVLRKALEQIPDSVRLWKAVVEVSSEENARVLLHRAVECCPLHVELWLA 50
           AKLE  + ++SRVLRK LE IPDSVRLWKAVVE+++EE+AR+LLHRAVECCPLHVELWLA
Sbjct: 395 AKLESSDLNKSRVLRKGLEHIPDSVRLWKAVVELANEEDARLLLHRAVECCPLHVELWLA 454

Query: 49  LARLETYDSAKKVLNK 2
           LARLETYD A+KVLNK
Sbjct: 455 LARLETYDQARKVLNK 470



 Score = 62.8 bits (151), Expect = 8e-08
 Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 10/158 (6%)
 Frame = -1

Query: 478  LLKSLIQTNPKHPLGWIAAAMLEEVAGKILVARRLISKGCEECPKSEDVWLEACRL---S 308
            LLK  +  NP+  + W+ AA  + +AG +  AR ++ +     P SE++WL A +L   +
Sbjct: 611  LLKKAVNYNPRAEVLWLMAAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAFKLEFEN 670

Query: 307  SPMEXXXXXXXXXXXIPTSVKLWMQAAKLEQD---EESRSRVLRKALEQIPDSVRLWKAV 137
            +  E              + ++WM++A +E++        R+L + L+  P   +LW  +
Sbjct: 671  NEPERARMLLAKARERGGTERVWMKSAIVERELGNVGEERRLLEEGLKLFPSFFKLWLML 730

Query: 136  VEVSSE----ENARVLLHRAVECCPLHVELWLALARLE 35
             ++         A+ +    ++ CP  + LWL+LA LE
Sbjct: 731  GQMEDRLGNGAKAKEVFENGLKHCPSCIPLWLSLAGLE 768


>ref|XP_002267416.1| PREDICTED: pre-mRNA-processing factor 6-like [Vitis vinifera]
          Length = 1023

 Score =  396 bits (1017), Expect = e-108
 Identities = 204/256 (79%), Positives = 221/256 (86%), Gaps = 2/256 (0%)
 Frame = -1

Query: 763  VPDTLLEKARQEKEHVTALDPTSREAGGSETPWVQT--TDLTAVGEGRETVLSLKLDRVL 590
            VPDTLLEKARQE+EHVTALDP SR AGG+ETPW QT  TDLTAVGEGR TVLSLKLDR+ 
Sbjct: 274  VPDTLLEKARQEQEHVTALDPRSRAAGGTETPWAQTPVTDLTAVGEGRGTVLSLKLDRLS 333

Query: 589  DSVSGLTAVDPKGYLTDLKSMNITSNAEISDIKKVRLLLKSLIQTNPKHPLGWIAAAMLE 410
            DSVSGLT VDPKGYLTDLKSM ITS+AEISDIKK RLLLKS+ QTNPKHP GWIAAA LE
Sbjct: 334  DSVSGLTVVDPKGYLTDLKSMKITSDAEISDIKKARLLLKSVTQTNPKHPPGWIAAARLE 393

Query: 409  EVAGKILVARRLISKGCEECPKSEDVWLEACRLSSPMEXXXXXXXXXXXIPTSVKLWMQA 230
            EVAGKI  AR+LI KGCEECPK+EDVWLEACRL+SP E           I  SVKLWMQA
Sbjct: 394  EVAGKIQAARQLIHKGCEECPKNEDVWLEACRLASPDEAKAVIAKGVKAISNSVKLWMQA 453

Query: 229  AKLEQDEESRSRVLRKALEQIPDSVRLWKAVVEVSSEENARVLLHRAVECCPLHVELWLA 50
            AKLE D+ ++SRVLRK LE IPDSVRLWKAVVE+++EE+AR+LL RAVECCPLHVELWLA
Sbjct: 454  AKLEHDDVNKSRVLRKGLEHIPDSVRLWKAVVELANEEDARLLLQRAVECCPLHVELWLA 513

Query: 49   LARLETYDSAKKVLNK 2
            LARLETYD+AKKVLNK
Sbjct: 514  LARLETYDNAKKVLNK 529



 Score = 55.8 bits (133), Expect = 1e-05
 Identities = 37/158 (23%), Positives = 73/158 (46%), Gaps = 10/158 (6%)
 Frame = -1

Query: 478  LLKSLIQTNPKHPLGWIAAAMLEEVAGKILVARRLISKGCEECPKSEDVWLEACRL---S 308
            LL+  +   P+  + W+  A  + +AG +  AR ++ +     P SE++WL A +L   +
Sbjct: 670  LLRKAVTYRPQAEVLWLMGAKEKWLAGDVPAARAILQEAYAAIPNSEEIWLAAFKLEFEN 729

Query: 307  SPMEXXXXXXXXXXXIPTSVKLWMQAAKLEQD---EESRSRVLRKALEQIPDSVRLWKAV 137
               E              + ++WM++A +E++        R+L + L+  P   +LW  +
Sbjct: 730  HEPERARMLLAKARERGGTERVWMKSAIVERELGNTGEERRLLGEGLKLFPSFFKLWLML 789

Query: 136  VEVSSE----ENARVLLHRAVECCPLHVELWLALARLE 35
             ++       E A+      ++ CP  + LWL+L+ LE
Sbjct: 790  GQLEERFGNFEKAKEAYDSGLKHCPSCIPLWLSLSHLE 827