BLASTX nr result

ID: Bupleurum21_contig00020336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020336
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002319259.1| predicted protein [Populus trichocarpa] gi|2...   290   1e-76
emb|CBI20464.3| unnamed protein product [Vitis vinifera]              285   3e-75
ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-l...   285   3e-75
emb|CAN83694.1| hypothetical protein VITISV_013363 [Vitis vinifera]   285   3e-75
ref|XP_002866048.1| WD-40 repeat family protein [Arabidopsis lyr...   263   2e-68

>ref|XP_002319259.1| predicted protein [Populus trichocarpa] gi|222857635|gb|EEE95182.1|
           predicted protein [Populus trichocarpa]
          Length = 408

 Score =  290 bits (742), Expect = 1e-76
 Identities = 135/176 (76%), Positives = 151/176 (85%)
 Frame = -1

Query: 541 VHRYVRSLGPILDVEFTNGGSQFISSSDVSNGNVTENSIMVWDVSRQVPLSNQVYSEAYT 362
           V  Y+R LGPILDVEFT  G QFISSSDVS  N++ENSI+VWDVSRQVPLSNQVY EAYT
Sbjct: 233 VREYIRGLGPILDVEFTINGKQFISSSDVSGSNLSENSIIVWDVSRQVPLSNQVYVEAYT 292

Query: 361 CPSVKCHPSEQYFVAQSNGDYIAIFSAKAPFKLDKYRRYESHGVSGFPVKCAFSLDGDTI 182
           CPSV+CHP E  FVAQSN +YIAIFS+  PF+LDKY+RYESHGVSGFPVKC FSLDG+ +
Sbjct: 293 CPSVRCHPFEPCFVAQSNANYIAIFSSSPPFRLDKYKRYESHGVSGFPVKCNFSLDGEKL 352

Query: 181 ASGSSDGCIYFYNSRSTELIKKLKVYEHACIDVAFHPFIPNVIASCSWNGDVSVLE 14
            SGSSDGCIY YN RS+ELI+K+KVYE ACIDV FHP +PNVI SCSWNGDVS+ E
Sbjct: 353 VSGSSDGCIYIYNYRSSELIRKIKVYEQACIDVVFHPVLPNVIGSCSWNGDVSIFE 408


>emb|CBI20464.3| unnamed protein product [Vitis vinifera]
          Length = 506

 Score =  285 bits (729), Expect = 3e-75
 Identities = 128/176 (72%), Positives = 153/176 (86%)
 Frame = -1

Query: 541 VHRYVRSLGPILDVEFTNGGSQFISSSDVSNGNVTENSIMVWDVSRQVPLSNQVYSEAYT 362
           VH Y+R LGPILD+EFT    QFISSSDVS  N++ENSI+VWDVSRQVPLSNQVY EAYT
Sbjct: 331 VHEYIRGLGPILDIEFTVNAKQFISSSDVSGSNMSENSIVVWDVSRQVPLSNQVYVEAYT 390

Query: 361 CPSVKCHPSEQYFVAQSNGDYIAIFSAKAPFKLDKYRRYESHGVSGFPVKCAFSLDGDTI 182
           CP ++CHPS+ +F+AQSNG+YIAIFS+  PFKLDKY+RYE+HGVSGFP+KC FSLDG+ +
Sbjct: 391 CPCIRCHPSDPFFIAQSNGNYIAIFSSCPPFKLDKYKRYENHGVSGFPIKCNFSLDGEKL 450

Query: 181 ASGSSDGCIYFYNSRSTELIKKLKVYEHACIDVAFHPFIPNVIASCSWNGDVSVLE 14
           ASGSSDGCIY Y+ RS+EL++K+K YE ACIDVAFHP +PNVIA+C W+G VSV E
Sbjct: 451 ASGSSDGCIYLYDYRSSELVQKIKAYEQACIDVAFHPLLPNVIAACGWDGAVSVFE 506


>ref|XP_002280346.1| PREDICTED: WD repeat-containing protein 25-like [Vitis vinifera]
          Length = 418

 Score =  285 bits (729), Expect = 3e-75
 Identities = 128/176 (72%), Positives = 153/176 (86%)
 Frame = -1

Query: 541 VHRYVRSLGPILDVEFTNGGSQFISSSDVSNGNVTENSIMVWDVSRQVPLSNQVYSEAYT 362
           VH Y+R LGPILD+EFT    QFISSSDVS  N++ENSI+VWDVSRQVPLSNQVY EAYT
Sbjct: 243 VHEYIRGLGPILDIEFTVNAKQFISSSDVSGSNMSENSIVVWDVSRQVPLSNQVYVEAYT 302

Query: 361 CPSVKCHPSEQYFVAQSNGDYIAIFSAKAPFKLDKYRRYESHGVSGFPVKCAFSLDGDTI 182
           CP ++CHPS+ +F+AQSNG+YIAIFS+  PFKLDKY+RYE+HGVSGFP+KC FSLDG+ +
Sbjct: 303 CPCIRCHPSDPFFIAQSNGNYIAIFSSCPPFKLDKYKRYENHGVSGFPIKCNFSLDGEKL 362

Query: 181 ASGSSDGCIYFYNSRSTELIKKLKVYEHACIDVAFHPFIPNVIASCSWNGDVSVLE 14
           ASGSSDGCIY Y+ RS+EL++K+K YE ACIDVAFHP +PNVIA+C W+G VSV E
Sbjct: 363 ASGSSDGCIYLYDYRSSELVQKIKAYEQACIDVAFHPLLPNVIAACGWDGAVSVFE 418


>emb|CAN83694.1| hypothetical protein VITISV_013363 [Vitis vinifera]
          Length = 297

 Score =  285 bits (729), Expect = 3e-75
 Identities = 128/176 (72%), Positives = 153/176 (86%)
 Frame = -1

Query: 541 VHRYVRSLGPILDVEFTNGGSQFISSSDVSNGNVTENSIMVWDVSRQVPLSNQVYSEAYT 362
           VH Y+R LGPILD+EFT    QFISSSDVS  N++ENSI+VWDVSRQVPLSNQVY EAYT
Sbjct: 122 VHEYIRGLGPILDIEFTVNAKQFISSSDVSGSNMSENSIVVWDVSRQVPLSNQVYVEAYT 181

Query: 361 CPSVKCHPSEQYFVAQSNGDYIAIFSAKAPFKLDKYRRYESHGVSGFPVKCAFSLDGDTI 182
           CP ++CHPS+ +F+AQSNG+YIAIFS+  PFKLDKY+RYE+HGVSGFP+KC FSLDG+ +
Sbjct: 182 CPCIRCHPSDPFFIAQSNGNYIAIFSSCPPFKLDKYKRYENHGVSGFPIKCNFSLDGEKL 241

Query: 181 ASGSSDGCIYFYNSRSTELIKKLKVYEHACIDVAFHPFIPNVIASCSWNGDVSVLE 14
           ASGSSDGCIY Y+ RS+EL++K+K YE ACIDVAFHP +PNVIA+C W+G VSV E
Sbjct: 242 ASGSSDGCIYLYDYRSSELVQKIKAYEQACIDVAFHPLLPNVIAACGWDGAVSVFE 297


>ref|XP_002866048.1| WD-40 repeat family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311883|gb|EFH42307.1| WD-40 repeat family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 455

 Score =  263 bits (671), Expect = 2e-68
 Identities = 116/176 (65%), Positives = 145/176 (82%)
 Frame = -1

Query: 541 VHRYVRSLGPILDVEFTNGGSQFISSSDVSNGNVTENSIMVWDVSRQVPLSNQVYSEAYT 362
           VH Y+R LGPILDVEF  GG +FISSSDVS  N++EN++M+WD+SR+VPLSNQVY EAYT
Sbjct: 280 VHEYIRDLGPILDVEFIAGGKRFISSSDVSGRNISENAVMIWDISREVPLSNQVYVEAYT 339

Query: 361 CPSVKCHPSEQYFVAQSNGDYIAIFSAKAPFKLDKYRRYESHGVSGFPVKCAFSLDGDTI 182
           CP +K HP +  F+AQS+G+Y AIFS   PFKL+KY+R+E H V+GFP+KC FS DG+T+
Sbjct: 340 CPCIKRHPQDPVFIAQSHGNYAAIFSTNPPFKLNKYKRFEGHWVAGFPIKCNFSPDGETL 399

Query: 181 ASGSSDGCIYFYNSRSTELIKKLKVYEHACIDVAFHPFIPNVIASCSWNGDVSVLE 14
            SGSSDG IY Y+ +STELIKKLK YE  C+DV++HP +PNV+A+CSWNG VSV E
Sbjct: 400 ISGSSDGSIYMYSYKSTELIKKLKAYEQPCVDVSYHPVLPNVVAACSWNGQVSVFE 455


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