BLASTX nr result

ID: Bupleurum21_contig00020332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020332
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37313.3| unnamed protein product [Vitis vinifera]               93   2e-17
ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-...    93   2e-17
ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
gb|ABK94910.1| unknown [Populus trichocarpa]                           84   2e-14
ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|2...    83   3e-14

>emb|CBI37313.3| unnamed protein product [Vitis vinifera]
          Length = 451

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/68 (63%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
 Frame = -3

Query: 201 EENVT-SNGESATHLQVLINDMLCVACSELLFRPVVLNCGHVYCETCISIPPDEKLRCQV 25
           EENV   N    T  Q+ I D+ C AC +LLFRPVVLNCGHVYCETC +IP DE+ RC+V
Sbjct: 171 EENVVLKNNLDQTCEQLSIADVQCTACKQLLFRPVVLNCGHVYCETCFNIPVDERFRCKV 230

Query: 24  CQSLHPNG 1
           CQ LHP+G
Sbjct: 231 CQVLHPSG 238


>ref|XP_002266086.1| PREDICTED: E3 ubiquitin-protein ligase PRT1-like [Vitis vinifera]
          Length = 470

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 43/68 (63%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
 Frame = -3

Query: 201 EENVT-SNGESATHLQVLINDMLCVACSELLFRPVVLNCGHVYCETCISIPPDEKLRCQV 25
           EENV   N    T  Q+ I D+ C AC +LLFRPVVLNCGHVYCETC +IP DE+ RC+V
Sbjct: 190 EENVVLKNNLDQTCEQLSIADVQCTACKQLLFRPVVLNCGHVYCETCFNIPVDERFRCKV 249

Query: 24  CQSLHPNG 1
           CQ LHP+G
Sbjct: 250 CQVLHPSG 257


>ref|XP_002301781.1| predicted protein [Populus trichocarpa] gi|222843507|gb|EEE81054.1|
           predicted protein [Populus trichocarpa]
          Length = 382

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/74 (54%), Positives = 48/74 (64%)
 Frame = -3

Query: 222 VKHNHGVEENVTSNGESATHLQVLINDMLCVACSELLFRPVVLNCGHVYCETCISIPPDE 43
           +K +   E N+  +  +    QV I D+ C  C +LLF PVVLNCGHVYCETCI  P +E
Sbjct: 178 IKPDSVEENNLPEDKSNRNCKQVSIADVQCSTCKQLLFHPVVLNCGHVYCETCIG-PVNE 236

Query: 42  KLRCQVCQSLHPNG 1
            L CQVCQSLHP G
Sbjct: 237 MLTCQVCQSLHPRG 250


>gb|ABK94910.1| unknown [Populus trichocarpa]
          Length = 469

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 40/74 (54%), Positives = 48/74 (64%)
 Frame = -3

Query: 222 VKHNHGVEENVTSNGESATHLQVLINDMLCVACSELLFRPVVLNCGHVYCETCISIPPDE 43
           +K +   E N+  +  +    QV I D+ C  C +LLF PVVLNCGHVYCETCI  P +E
Sbjct: 191 IKPDSVEENNLPEDKSNRNCKQVSIADVQCSTCKQLLFHPVVLNCGHVYCETCIG-PVNE 249

Query: 42  KLRCQVCQSLHPNG 1
            L CQVCQSLHP G
Sbjct: 250 MLTCQVCQSLHPRG 263


>ref|XP_002303829.1| predicted protein [Populus trichocarpa] gi|222841261|gb|EEE78808.1|
           predicted protein [Populus trichocarpa]
          Length = 469

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 34/53 (64%), Positives = 41/53 (77%)
 Frame = -3

Query: 159 QVLINDMLCVACSELLFRPVVLNCGHVYCETCISIPPDEKLRCQVCQSLHPNG 1
           Q  + D+LC  C +LLF+PVVLNCGHVYCE+CI+ P     RCQ+CQSLHPNG
Sbjct: 219 QASVADLLCAECKKLLFQPVVLNCGHVYCESCIASPMQGIPRCQICQSLHPNG 271


Top