BLASTX nr result

ID: Bupleurum21_contig00020320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020320
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50976.1| T4.15 [Malus x robusta]                                57   3e-11
emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse tr...    51   6e-09
gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arac...    49   3e-08
ref|ZP_11076084.1| hypothetical protein B857_03966 [Bacillus isr...    49   6e-08
gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptas...    51   1e-07

>emb|CCH50976.1| T4.15 [Malus x robusta]
          Length = 986

 Score = 57.4 bits (137), Expect(2) = 3e-11
 Identities = 44/146 (30%), Positives = 65/146 (44%)
 Frame = -3

Query: 576 EKLEMFKEMVGLDRLPLHGEDVNQMWNQVASTIRNVAKDLLEVTXXXXXXXXXXXXXXXX 397
           EK  +FKE V    +     + +QMW+ +AS IR VAK++L  +                
Sbjct: 365 EKQAIFKEKVITQCVWDREGEASQMWDSMASCIRKVAKEVLGESKGFAPHQKESWWWNEE 424

Query: 396 XXXXXXXXXXXXXXXXXXXXXXXXXRVKLKQNCFKELINCQVEEELDARKILYKQARSDA 217
                                    +VK K+ C K L   + +E  +     Y++A+ +A
Sbjct: 425 VQT----------------------KVKAKKECCKALYKDRTDENGER----YRKAKQEA 458

Query: 216 KKPVIEAKDKAYEDMYTHLDTKEGKM 139
           KK V EAK  AY+DMY  LDTKEG++
Sbjct: 459 KKAVREAKLAAYDDMYKRLDTKEGEL 484



 Score = 35.8 bits (81), Expect(2) = 3e-11
 Identities = 21/42 (50%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
 Frame = -2

Query: 148 GENDIHRLAKTR----RDLGFVRYIKDEDEWVLVGEDDIRGR 35
           GE DI++LA+ R    RDL  VR IKDED  VL  E+ ++ R
Sbjct: 482 GELDIYKLARAREKKTRDLNQVRCIKDEDGKVLATENAVKDR 523


>emb|CBL94163.1| putative RNA-directed DNA polymerase (Reverse transcriptase) [Malus
           x domestica]
          Length = 622

 Score = 50.8 bits (120), Expect(2) = 6e-09
 Identities = 27/60 (45%), Positives = 38/60 (63%)
 Frame = -3

Query: 318 VKLKQNCFKELINCQVEEELDARKILYKQARSDAKKPVIEAKDKAYEDMYTHLDTKEGKM 139
           VK K+ C K L   + +E  +     Y++A+ +AKK V EAK  AY+DMY  LDTKEG++
Sbjct: 33  VKAKKECCKALYKDRTDENGER----YRKAKQEAKKAVREAKLAAYDDMYKRLDTKEGEL 88



 Score = 34.7 bits (78), Expect(2) = 6e-09
 Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 4/42 (9%)
 Frame = -2

Query: 148 GENDIHRLAKTR----RDLGFVRYIKDEDEWVLVGEDDIRGR 35
           GE DI++LA+ R    RDL  VR IKDED  VL  E+ ++ +
Sbjct: 86  GELDIYKLARAREKKTRDLNQVRCIKDEDGKVLATENAVKDK 127


>gb|AEL30371.1| TIR-NBS-LRR type disease resistance protein [Arachis hypogaea]
          Length = 1939

 Score = 49.3 bits (116), Expect(2) = 3e-08
 Identities = 24/60 (40%), Positives = 37/60 (61%)
 Frame = -3

Query: 321 RVKLKQNCFKELINCQVEEELDARKILYKQARSDAKKPVIEAKDKAYEDMYTHLDTKEGK 142
           ++K+K+ CFKE   C+  +  +     YK A+ + K  V EA+ +AYE +Y  LDTKEG+
Sbjct: 827 KIKIKRECFKEWSLCRNVDNWEK----YKAAKKETKVAVSEARTRAYEGLYQSLDTKEGE 882



 Score = 33.9 bits (76), Expect(2) = 3e-08
 Identities = 20/42 (47%), Positives = 26/42 (61%), Gaps = 4/42 (9%)
 Frame = -2

Query: 148  GENDIHRLAKTR----RDLGFVRYIKDEDEWVLVGEDDIRGR 35
            GE  I+R+AK+R    RDL  V+ IKD+D  VL  E+ I  R
Sbjct: 881  GEKGIYRIAKSRERRTRDLDQVKCIKDKDREVLAQEEKINER 922


>ref|ZP_11076084.1| hypothetical protein B857_03966 [Bacillus isronensis B3W22]
           gi|405383726|gb|EKB43276.1| hypothetical protein
           B857_03966 [Bacillus isronensis B3W22]
          Length = 101

 Score = 48.5 bits (114), Expect(2) = 6e-08
 Identities = 25/60 (41%), Positives = 38/60 (63%)
 Frame = -3

Query: 318 VKLKQNCFKELINCQVEEELDARKILYKQARSDAKKPVIEAKDKAYEDMYTHLDTKEGKM 139
           +K K+ C + L   + +E  +     Y++A+ +AKK V EAK  AY+DMY  LDTKEG++
Sbjct: 1   MKAKKECCRALYKDRTDENGER----YRKAKQEAKKAVREAKLAAYDDMYKRLDTKEGEL 56



 Score = 33.9 bits (76), Expect(2) = 6e-08
 Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 4/43 (9%)
 Frame = -2

Query: 148 GENDIHRLAKTR----RDLGFVRYIKDEDEWVLVGEDDIRGRL 32
           GE DI++LA+ R    RDL  VR IKDED  VL  E+ ++ ++
Sbjct: 54  GELDIYKLARAREKKTRDLNQVRCIKDEDGKVLAIENAVKRQM 96


>gb|ABD28426.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 517

 Score = 50.8 bits (120), Expect(2) = 1e-07
 Identities = 26/60 (43%), Positives = 39/60 (65%)
 Frame = -3

Query: 321 RVKLKQNCFKELINCQVEEELDARKILYKQARSDAKKPVIEAKDKAYEDMYTHLDTKEGK 142
           +V++K++CFK+   C+  E  D     YK AR +AKK V EA+ +A+E +Y  L TKEG+
Sbjct: 40  KVRIKRDCFKDWSRCKNVETWDK----YKIARKEAKKVVSEARTQAFEGLYQSLGTKEGE 95



 Score = 30.0 bits (66), Expect(2) = 1e-07
 Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
 Frame = -2

Query: 166 TLGY*RGENDIHRLAKTR----RDLGFVRYIKDEDEWVLV 59
           +LG   GE  I++L+K R    RDL  V+ IKDE+  VLV
Sbjct: 88  SLGTKEGEKSIYKLSKGRERKTRDLDQVKCIKDEEGRVLV 127


Top