BLASTX nr result

ID: Bupleurum21_contig00020263 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020263
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520219.1| Gibberellin-regulated protein 3 precursor, p...    82   5e-14
ref|XP_003628630.1| Gibberellin-regulated protein [Medicago trun...    81   1e-13
ref|XP_002267612.1| PREDICTED: gibberellin-regulated protein 14 ...    79   4e-13
ref|XP_003552003.1| PREDICTED: snakin-2-like [Glycine max]             79   5e-13
ref|NP_001235658.1| uncharacterized protein LOC100305713 precurs...    77   1e-12

>ref|XP_002520219.1| Gibberellin-regulated protein 3 precursor, putative [Ricinus
           communis] gi|223540711|gb|EEF42274.1|
           Gibberellin-regulated protein 3 precursor, putative
           [Ricinus communis]
          Length = 105

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 43/86 (50%), Positives = 50/86 (58%)
 Frame = +3

Query: 3   IVPLFFLCTLQVSSYSENDDMKHTPLQVVKGPNRRLLTYVDCGGLCKVRCSAHSRQNVXX 182
           +V  F     QVSS  + +D      Q+VKG NRRLL ++DCGGLCKVRCS HSR NV  
Sbjct: 8   LVAFFLFFITQVSSDIQIEDQT---TQLVKGANRRLLPFMDCGGLCKVRCSLHSRPNVCT 64

Query: 183 XXXXXXXXXXXXVPPGTYGNREACGK 260
                       VPPGT GNR+ CGK
Sbjct: 65  RACGTCCYRCKCVPPGTSGNRDVCGK 90


>ref|XP_003628630.1| Gibberellin-regulated protein [Medicago truncatula]
           gi|355522652|gb|AET03106.1| Gibberellin-regulated
           protein [Medicago truncatula]
          Length = 112

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 40/83 (48%), Positives = 48/83 (57%)
 Frame = +3

Query: 12  LFFLCTLQVSSYSENDDMKHTPLQVVKGPNRRLLTYVDCGGLCKVRCSAHSRQNVXXXXX 191
           LF +  +  +  S +   + T  +VVKGPNRRLL +VDCG  C VRCS HSR NV     
Sbjct: 15  LFCMTKVLCADSSVHIQDQFTHFEVVKGPNRRLLAFVDCGTRCNVRCSVHSRPNVCMRAC 74

Query: 192 XXXXXXXXXVPPGTYGNREACGK 260
                    VPPGTYGNRE CG+
Sbjct: 75  GTCCLRCKCVPPGTYGNREMCGR 97


>ref|XP_002267612.1| PREDICTED: gibberellin-regulated protein 14 [Vitis vinifera]
           gi|296086511|emb|CBI32100.3| unnamed protein product
           [Vitis vinifera]
          Length = 108

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/86 (47%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
 Frame = +3

Query: 3   IVPLFFLCTLQVSSYSENDDMKHTPLQVVKGP-NRRLLTYVDCGGLCKVRCSAHSRQNVX 179
           +V +   C  + SS  +N+  +H   Q VKG   RRLL ++DCGGLCK RCS HSR NV 
Sbjct: 8   LVTIMLFCIAEASS-DDNNIFEHQHNQAVKGSAGRRLLPFLDCGGLCKERCSLHSRPNVC 66

Query: 180 XXXXXXXXXXXXXVPPGTYGNREACG 257
                        VPPGTYGNRE CG
Sbjct: 67  TRACGTCCVRCKCVPPGTYGNREMCG 92


>ref|XP_003552003.1| PREDICTED: snakin-2-like [Glycine max]
          Length = 115

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 39/75 (52%), Positives = 45/75 (60%)
 Frame = +3

Query: 36  VSSYSENDDMKHTPLQVVKGPNRRLLTYVDCGGLCKVRCSAHSRQNVXXXXXXXXXXXXX 215
           VSS +    + H+ L  VKGPNRRLL +VDCG  C+VRCS HSR  +             
Sbjct: 28  VSSVNIQGHLTHSEL--VKGPNRRLLPFVDCGARCRVRCSLHSRPKICSRACGTCCFRCR 85

Query: 216 XVPPGTYGNREACGK 260
            VPPGTYGNRE CGK
Sbjct: 86  CVPPGTYGNREMCGK 100


>ref|NP_001235658.1| uncharacterized protein LOC100305713 precursor [Glycine max]
           gi|255626389|gb|ACU13539.1| unknown [Glycine max]
          Length = 116

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 34/60 (56%), Positives = 40/60 (66%)
 Frame = +3

Query: 81  QVVKGPNRRLLTYVDCGGLCKVRCSAHSRQNVXXXXXXXXXXXXXXVPPGTYGNREACGK 260
           ++VKGPNRRLL++VDCG  C+VRCS HSR  +              VPPGTYGNRE CGK
Sbjct: 42  ELVKGPNRRLLSFVDCGERCRVRCSLHSRPKICTRACGTCCMRCRCVPPGTYGNREMCGK 101


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