BLASTX nr result

ID: Bupleurum21_contig00020232 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00020232
         (555 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor ...   302   3e-80
emb|CBI20820.3| unnamed protein product [Vitis vinifera]              302   3e-80
ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor ...   293   1e-77
ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor ...   293   1e-77
ref|XP_002528006.1| conserved hypothetical protein [Ricinus comm...   285   4e-75

>ref|XP_002280997.2| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Vitis
            vinifera]
          Length = 2024

 Score =  302 bits (773), Expect = 3e-80
 Identities = 151/184 (82%), Positives = 166/184 (90%)
 Frame = -3

Query: 553  GSLRNDQSPSEVLTSSGKQVVYHTCIALRQYFRAHLLLLVDSIRPSKSNRSAARNVPSVK 374
            GSLRND+SP EVLTSS KQ+ YHTC+ALRQYFRAHLLLLVDSIRP+K+NRSAARN+PSV+
Sbjct: 844  GSLRNDRSPPEVLTSSEKQIAYHTCVALRQYFRAHLLLLVDSIRPNKNNRSAARNLPSVR 903

Query: 373  AANKPLDISNEAMDETFRQIQKDRKLGPAFVRTRSPAVDKFFAMNGHITMLELCQAPPVE 194
            AA KPLD+SNEAMD  F Q+QKDRKLGPAFVR R  AVDKF   NGHITMLELCQAPPVE
Sbjct: 904  AAYKPLDLSNEAMDAVFLQLQKDRKLGPAFVRARWLAVDKFLTSNGHITMLELCQAPPVE 963

Query: 193  RYLHDLIQYALGVLHIVTLVPYSRKLIVNAPLSNDRVGIAVILDATNCAGYVEPQIIQPA 14
            RYLHDL+QYALGVLHIVTLVPYSRKLIVN  LSN+RVGIAVILDA N A +V+P+IIQPA
Sbjct: 964  RYLHDLLQYALGVLHIVTLVPYSRKLIVNVTLSNNRVGIAVILDAANGASFVDPEIIQPA 1023

Query: 13   LSVL 2
            L+VL
Sbjct: 1024 LNVL 1027


>emb|CBI20820.3| unnamed protein product [Vitis vinifera]
          Length = 1760

 Score =  302 bits (773), Expect = 3e-80
 Identities = 151/184 (82%), Positives = 166/184 (90%)
 Frame = -3

Query: 553  GSLRNDQSPSEVLTSSGKQVVYHTCIALRQYFRAHLLLLVDSIRPSKSNRSAARNVPSVK 374
            GSLRND+SP EVLTSS KQ+ YHTC+ALRQYFRAHLLLLVDSIRP+K+NRSAARN+PSV+
Sbjct: 688  GSLRNDRSPPEVLTSSEKQIAYHTCVALRQYFRAHLLLLVDSIRPNKNNRSAARNLPSVR 747

Query: 373  AANKPLDISNEAMDETFRQIQKDRKLGPAFVRTRSPAVDKFFAMNGHITMLELCQAPPVE 194
            AA KPLD+SNEAMD  F Q+QKDRKLGPAFVR R  AVDKF   NGHITMLELCQAPPVE
Sbjct: 748  AAYKPLDLSNEAMDAVFLQLQKDRKLGPAFVRARWLAVDKFLTSNGHITMLELCQAPPVE 807

Query: 193  RYLHDLIQYALGVLHIVTLVPYSRKLIVNAPLSNDRVGIAVILDATNCAGYVEPQIIQPA 14
            RYLHDL+QYALGVLHIVTLVPYSRKLIVN  LSN+RVGIAVILDA N A +V+P+IIQPA
Sbjct: 808  RYLHDLLQYALGVLHIVTLVPYSRKLIVNVTLSNNRVGIAVILDAANGASFVDPEIIQPA 867

Query: 13   LSVL 2
            L+VL
Sbjct: 868  LNVL 871


>ref|XP_003527808.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
            max]
          Length = 1868

 Score =  293 bits (750), Expect = 1e-77
 Identities = 149/185 (80%), Positives = 166/185 (89%), Gaps = 1/185 (0%)
 Frame = -3

Query: 553  GSLRNDQSPSEVLTSSGKQVVYHTCIALRQYFRAHLLLLVDSIRPSKSNRSAARNVPSVK 374
            GSLRND+S +EVLTSS KQ+ YHTC+ALRQYFRAHLL+LVDSIRP+KSNRSAARN+PSV+
Sbjct: 709  GSLRNDRSSAEVLTSSEKQIAYHTCVALRQYFRAHLLVLVDSIRPNKSNRSAARNIPSVR 768

Query: 373  AANKPLDISNEAMDETFRQIQKDRKLGPAFVRTRSPAVDKFFAMNGHITMLELCQAPPVE 194
            A  KPLDISNEAMD  F Q+QKDRKLGPAFVRTR  AV+KF A NGHITMLELCQAPPVE
Sbjct: 769  AVYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRWLAVEKFLASNGHITMLELCQAPPVE 828

Query: 193  RYLHDLIQYALGVLHIVTLVPYSRKLIVNAPLSNDRVGIAVILDATNCA-GYVEPQIIQP 17
            RYLHDL+QYALGVLHIVTLVP SRK+IVN  LSN+RVGIAVILDA N A  +V+P+IIQP
Sbjct: 829  RYLHDLLQYALGVLHIVTLVPSSRKMIVNVTLSNNRVGIAVILDAANIASNHVDPEIIQP 888

Query: 16   ALSVL 2
            AL+VL
Sbjct: 889  ALNVL 893


>ref|XP_003523712.1| PREDICTED: DDB1- and CUL4-associated factor homolog 1-like [Glycine
            max]
          Length = 1857

 Score =  293 bits (750), Expect = 1e-77
 Identities = 149/185 (80%), Positives = 166/185 (89%), Gaps = 1/185 (0%)
 Frame = -3

Query: 553  GSLRNDQSPSEVLTSSGKQVVYHTCIALRQYFRAHLLLLVDSIRPSKSNRSAARNVPSVK 374
            GSLRND+S +EVLTSS KQ+ YHTC+ALRQYFRAHLL+LVDSIRP+KSNRSAARN+PSV+
Sbjct: 698  GSLRNDRSSAEVLTSSEKQIAYHTCVALRQYFRAHLLVLVDSIRPNKSNRSAARNIPSVR 757

Query: 373  AANKPLDISNEAMDETFRQIQKDRKLGPAFVRTRSPAVDKFFAMNGHITMLELCQAPPVE 194
            A  KPLDISNEAMD  F Q+QKDRKLGPAFVRTR  AV+KF A NGHITMLELCQAPPVE
Sbjct: 758  AVYKPLDISNEAMDAVFLQLQKDRKLGPAFVRTRWLAVEKFLASNGHITMLELCQAPPVE 817

Query: 193  RYLHDLIQYALGVLHIVTLVPYSRKLIVNAPLSNDRVGIAVILDATNCA-GYVEPQIIQP 17
            RYLHDL+QYALGVLHIVTLVP SRK+IVN  LSN+RVGIAVILDA N A  +V+P+IIQP
Sbjct: 818  RYLHDLLQYALGVLHIVTLVPSSRKMIVNVTLSNNRVGIAVILDAANIASNHVDPEIIQP 877

Query: 16   ALSVL 2
            AL+VL
Sbjct: 878  ALNVL 882


>ref|XP_002528006.1| conserved hypothetical protein [Ricinus communis]
            gi|223532632|gb|EEF34418.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1871

 Score =  285 bits (728), Expect = 4e-75
 Identities = 144/184 (78%), Positives = 163/184 (88%), Gaps = 1/184 (0%)
 Frame = -3

Query: 550  SLRNDQSPSEVLTSSGKQVVYHTCIALRQYFRAHLLLLVDSIRPSKSNRSAARNVPSVKA 371
            +LRND+SP EVLTSS KQ+ YHTC+ALRQYFRAHLLLL+D+IRP K+NRS ARN+PSV+A
Sbjct: 737  ALRNDRSPPEVLTSSEKQIAYHTCVALRQYFRAHLLLLLDTIRPYKNNRSVARNIPSVRA 796

Query: 370  ANKPLDISNEAMDETFRQIQKDRKLGPAFVRTRSPAVDKFFAMNGHITMLELCQAPPVER 191
            A KPLD+SNEA+D  F Q+QKDRKLG AFVRTR PAVDKF   NGHITMLELCQAPPVER
Sbjct: 797  AYKPLDLSNEAVDAVFLQLQKDRKLGSAFVRTRFPAVDKFLLFNGHITMLELCQAPPVER 856

Query: 190  YLHDLIQYALGVLHIVTLVPYSRKLIVNAPLSNDRVGIAVILDATNCAG-YVEPQIIQPA 14
            YLHDL+QYALGVLHIVTLV  SRK+IVNA LSN+RVGIAVILDA N +G YV+ +IIQPA
Sbjct: 857  YLHDLLQYALGVLHIVTLVNDSRKMIVNATLSNNRVGIAVILDAANISGNYVDHEIIQPA 916

Query: 13   LSVL 2
            L+VL
Sbjct: 917  LNVL 920


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